We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
JUND
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • JUND
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:153.4 nTPM
HPA Brain:279.6 nTPM
GTEx:153.4 nTPM
FANTOM5:297.5 Scaled Tags Per Million
Mouse:30.7 nTPM
Allen mouse:9.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA063029Antibody CAB005268
Glial cells MediumLow
Neuronal cells LowNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

279.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 259.1
1781 Male, age 74, unknown 354.2
2289 Male, age 61, right hemisphere 330.9
2481 Female, age 94, left hemisphere 270.6
2288 Male, age 75, left hemisphere 261.2
2290 Female, age 72, unknown 256.1
2846 Female, age 79, unknown 233.2
1857 Female, age 85, left hemisphere 187.0
1854 Male, age 80, left hemisphere 179.3
Globus pallidus, externus
nTPM: 225.6
2646 Male, age 61, right hemisphere 262.1
2772 Female, age 79, unknown 237.3
2567 Female, age 72, unknown 227.6
1996 Male, age 80, right hemisphere 216.9
2395 Male, age 75, both hemispheres 184.3
Globus pallidus, internus
nTPM: 227.6
2111 Female, age 85, right hemisphere 304.1
2778 Female, age 91, both hemispheres 257.4
2566 Female, age 72, unknown 239.0
2287 Male, age 75, right hemisphere 238.9
2483 Female, age 94, right hemisphere 219.9
1818 Male, age 74, unknown 173.7
2037 Male, age 80, right hemisphere 160.2
Nucleus accumbens
nTPM: 226.2
2732 Male, age 80, right hemisphere 273.8
1783 Male, age 74, unknown 269.3
1806 Female, age 85, left hemisphere 237.3
2286 Male, age 75, left hemisphere 223.8
2698 Female, age 72, unknown 214.1
2824 Male, age 61, right hemisphere 205.1
1856 Female, age 91, right hemisphere 197.3
2391 Female, age 94, left hemisphere 188.8
Nucleus basalis of Meynert
nTPM: 226.7
2569 Male, age 61, both hemispheres 268.4
2484 Female, age 94, left hemisphere 266.9
2821 Male, age 75, both hemispheres 211.2
2393 Male, age 80, right hemisphere 160.2
Nucleus of the diagonal band
nTPM: 238.1
1979 Male, age 74, unknown 274.2
2195 Female, age 85, both hemispheres 243.9
2775 Male, age 80, right hemisphere 236.9
1812 Female, age 91, both hemispheres 229.5
2029 Male, age 61, right hemisphere 205.9
Putamen
nTPM: 229.5
2647 Male, age 75, left hemisphere 276.7
2489 Female, age 72, unknown 270.5
2466 Female, age 79, unknown 235.5
2482 Female, age 94, left hemisphere 226.2
1829 Male, age 74, unknown 212.3
1937 Female, age 91, right hemisphere 204.3
1838 Male, age 80, right hemisphere 180.5
Septal nuclei
nTPM: 247.3
1960 Male, age 74, unknown 296.0
2629 Female, age 94, right hemisphere 267.3
2059 Female, age 85, both hemispheres 264.1
2031 Female, age 72, unknown 253.1
2009 Female, age 91, both hemispheres 235.2
2394 Male, age 61, left hemisphere 223.2
2199 Male, age 80, right hemisphere 192.3
Stria terminalis, bed nucleus
nTPM: 279.6
1974 Female, age 91, both hemispheres 308.5
2486 Female, age 94, both hemispheres 267.0
2201 Male, age 74, unknown 263.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 140.2
Samples: 246

Max nTPM: 365.1
Min nTPM: 45.1
Std nTPM: 47.5
Median nTPM: 135.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 365.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 331.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 324.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 288.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 282.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 256.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 254.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 252.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 249.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 233.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 230.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 229.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 228.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 225.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 221.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 219.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 215.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 214.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 207.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 207.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 206.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 203.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 198.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 197.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 197.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 194.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 194.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 193.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 192.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 190.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 188.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 186.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 185.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 185.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 184.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 183.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 182.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 181.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 181.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 177.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 177.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 175.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 175.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 171.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 171.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 170.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 169.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 168.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 166.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 165.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 165.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 164.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 162.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 162.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 161.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 159.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 159.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 158.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 158.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 158.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 158.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 157.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 156.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 156.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 154.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 153.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 153.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 153.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 152.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 152.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 151.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 151.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 151.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 150.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 150.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 149.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 148.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 148.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 148.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 148.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 148.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 147.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 147.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 146.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 145.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 145.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 145.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 145.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 145.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 144.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 144.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 144.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 144.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 144.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 143.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 143.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 143.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 143.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 143.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 142.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 142.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 142.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 142.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 142.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 142.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 142.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 141.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 141.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 140.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 140.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 140.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 139.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 139.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 139.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 138.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 138.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 138.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 137.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 137.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 137.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 137.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 137.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 136.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 135.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 135.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 135.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 134.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 134.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 134.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 134.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 133.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 133.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 133.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 132.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 132.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 132.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 131.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 131.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 131.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 131.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 131.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 130.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 130.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 129.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 129.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 128.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 128.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 127.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 126.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 125.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 125.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 124.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 124.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 123.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 123.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 123.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 123.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 123.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 121.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 121.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 121.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 121.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 121.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 121.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 120.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 120.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 120.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 120.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 120.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 120.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 119.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 119.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 118.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 117.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 117.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 117.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 117.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 116.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 116.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 115.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 115.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 115.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 114.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 114.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 114.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 113.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 113.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 112.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 111.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 111.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 111.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 111.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 109.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 109.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 108.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 107.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 106.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 106.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 105.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 104.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 104.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 103.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 103.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 101.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 101.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 100.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 99.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 99.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 99.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 96.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 96.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 96.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 94.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 94.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 94.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 94.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 93.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 92.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 92.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 90.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 88.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 87.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 86.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 84.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 83.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 82.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 79.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 78.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 77.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 75.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 74.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 73.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 72.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 70.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 69.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 67.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 65.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 64.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 63.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 63.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 62.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 58.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 48.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 46.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 45.1
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 134.6
Samples: 246

Max nTPM: 370.8
Min nTPM: 32.5
Std nTPM: 47.1
Median nTPM: 126.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 370.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 364.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 341.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 294.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 239.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 235.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 233.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 230.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 230.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 225.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 225.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 224.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 213.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 211.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 211.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 211.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 207.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 205.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 205.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 203.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 203.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 202.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 199.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 197.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 197.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 193.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 192.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 190.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 188.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 183.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 181.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 177.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 176.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 176.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 176.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 175.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 174.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 174.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 173.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 173.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 170.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 168.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 166.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 165.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 165.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 162.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 161.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 160.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 160.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 159.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 158.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 157.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 157.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 156.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 156.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 156.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 155.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 155.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 155.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 155.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 154.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 154.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 153.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 152.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 152.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 152.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 151.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 151.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 151.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 151.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 150.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 149.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 149.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 149.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 147.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 146.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 146.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 146.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 145.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 145.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 144.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 144.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 144.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 143.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 142.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 142.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 142.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 142.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 142.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 141.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 141.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 140.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 139.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 139.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 138.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 137.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 137.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 136.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 136.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 136.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 135.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 135.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 134.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 134.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 134.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 133.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 133.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 133.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 133.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 132.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 132.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 131.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 131.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 131.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 130.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 130.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 130.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 129.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 129.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 129.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 128.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 127.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 126.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 126.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 126.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 126.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 126.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 125.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 125.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 125.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 125.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 124.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 124.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 123.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 123.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 123.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 123.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 123.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 122.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 122.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 122.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 121.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 121.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 121.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 120.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 120.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 119.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 118.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 118.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 118.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 118.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 116.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 116.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 116.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 115.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 115.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 115.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 114.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 113.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 113.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 113.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 112.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 112.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 112.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 112.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 111.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 111.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 111.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 111.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 110.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 109.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 109.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 109.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 109.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 108.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 108.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 108.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 108.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 108.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 107.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 107.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 107.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 106.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 106.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 106.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 105.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 104.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 104.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 103.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 103.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 102.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 101.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 101.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 101.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 101.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 100.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 100.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 99.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 99.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 99.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 98.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 98.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 97.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 96.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 96.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 96.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 95.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 94.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 94.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 93.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 92.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 91.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 90.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 90.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 89.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 89.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 88.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 88.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 88.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 88.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 87.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 85.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 85.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 83.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 83.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 83.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 81.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 80.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 79.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 79.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 78.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 77.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 76.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 74.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 72.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 71.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 71.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 71.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 70.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 67.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 64.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 61.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 51.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 49.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 49.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 32.5
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 153.4
Samples: 205

Max nTPM: 370.7
Min nTPM: 40.2
Std nTPM: 52.9
Median nTPM: 145.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 370.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 338.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 299.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 286.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 277.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 272.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 269.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 267.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 266.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 262.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 262.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 262.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 253.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 249.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 246.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 245.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 229.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 228.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 222.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 219.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 218.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 218.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 217.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 216.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 214.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 214.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 211.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 210.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 207.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 206.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 206.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 204.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 201.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 201.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 200.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 198.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 196.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 194.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 193.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 192.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 191.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 191.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 188.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 186.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 186.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 183.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 181.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 180.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 180.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 180.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 179.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 178.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 178.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 178.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 178.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 177.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 175.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 174.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 173.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 172.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 169.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 168.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 168.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 168.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 167.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 166.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 166.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 165.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 165.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 165.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 164.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 163.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 163.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 163.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 162.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 160.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 160.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 160.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 159.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 158.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 158.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 157.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 157.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 156.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 155.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 155.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 154.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 154.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 154.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 153.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 152.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 151.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 151.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 150.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 149.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 149.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 148.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 148.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 147.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 147.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 146.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 146.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 145.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 145.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 145.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 144.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 144.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 144.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 143.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 143.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 142.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 142.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 142.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 141.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 140.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 140.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 140.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 139.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 138.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 138.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 138.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 137.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 137.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 136.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 136.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 136.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 135.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 134.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 133.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 132.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 131.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 130.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 130.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 130.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 128.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 128.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 128.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 128.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 127.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 126.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 126.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 125.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 124.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 124.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 123.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 123.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 122.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 122.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 121.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 121.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 119.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 117.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 117.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 116.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 116.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 115.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 115.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 114.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 113.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 112.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 112.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 112.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 112.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 110.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 110.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 109.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 106.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 106.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 105.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 105.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 104.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 104.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 101.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 101.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 100.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 99.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 98.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 96.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 96.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 95.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 95.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 93.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 92.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 92.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 91.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 89.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 89.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 89.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 88.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 88.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 88.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 87.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 87.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 84.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 84.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 80.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 75.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 75.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 74.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 73.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 71.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 69.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 67.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 65.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 40.2
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

297.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 169.4
FF:10164-103B2 76 years, female 169.4
Nucleus accumbens
Scaled Tags Per Million: 297.5
FF:10037-101F1 23-56 years, mixed 297.5
Putamen
Scaled Tags Per Million: 188.6
FF:10176-103C5 60 years, female 188.6
Globus pallidus
Scaled Tags Per Million: 194.1
FF:10175-103C4 60 years, female 238.5
FF:10161-103A8 76 years, female 149.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 19.8
Samples: 4

Max nTPM: 38.1
Min nTPM: 9.6
Sample A Male 19.4
Sample B Male 38.1
Sample C Female 9.6
Sample D Female 12.0
Septum
nTPM: 30.7
Samples: 4

Max nTPM: 37.5
Min nTPM: 20.8
Sample A Male 37.5
Sample B Male 30.4
Sample C Female 33.9
Sample D Female 20.8
Ventral forebrain
nTPM: 22.9
Samples: 4

Max nTPM: 32.6
Min nTPM: 13.0
Sample A Male 26.5
Sample B Male 19.4
Sample C Female 32.6
Sample D Female 13.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.8
606 Antisense, RP_040507_01_C09, Mouse strain C57BL/6J (56 days, male) 8.8
607 Antisense, RP_040507_01_C09, Mouse strain C57BL/6J (56 days, male) 7.8
Pallidum
Expression energy: 9.6
606 Antisense, RP_040507_01_C09, Mouse strain C57BL/6J (56 days, male) 9.6
607 Antisense, RP_040507_01_C09, Mouse strain C57BL/6J (56 days, male) 9.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org