HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:138.3 nTPM
HPA Brain:65.7 nTPM
GTEx:138.3 nTPM
FANTOM5:100.8 Scaled Tags Per Million
Pig:72.0 nTPM
Mouse:175.8 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041153Antibody HPA042031
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 65.7
Sample id Sample description nTPM
Hippocampus
nTPM: 65.7
2529 Female, age 94, left hemisphere 75.5
1898 Male, age 80, left hemisphere 72.0
2621 Female, age 67, right hemisphere 65.1
1855 Male, age 76, left hemisphere 62.9
1911 Female, age 85, right hemisphere 60.3
2148 Female, age 91, left hemisphere 58.4
Dentate gyrus
nTPM: 61.2
2530 Female, age 94, left hemisphere 72.7
2246 Female, age 85, both hemispheres 66.3
2010 Male, age 76, both hemispheres 65.2
2528 Male, age 74, both hemispheres 55.8
1927 Female, age 91, both hemispheres 55.0
2531 Female, age 67, both hemispheres 52.0
Entorhinal gyrus
nTPM: 58.5
1938 Female, age 85, left hemisphere 66.7
2764 Male, age 80, right hemisphere 64.8
2117 Female, age 91, right hemisphere 63.5
1787 Male, age 76, left hemisphere 61.3
2686 Male, age 75, right hemisphere 48.4
2613 Female, age 94, left hemisphere 46.5
Hippocampus, CA1
nTPM: 63.7
2749 Male, age 80, left hemisphere 78.4
2527 Male, age 74, both hemispheres 66.1
1873 Female, age 85, both hemispheres 63.1
2045 Male, age 76, both hemispheres 57.2
2082 Female, age 91, right hemisphere 53.9
Hippocampus, CA2
nTPM: 60.6
2249 Male, age 74, both hemispheres 70.5
1892 Male, age 76, both hemispheres 62.5
1940 Female, age 85, left hemisphere 60.9
1963 Male, age 80, left hemisphere 59.6
2437 Female, age 94, left hemisphere 57.5
2113 Female, age 91, right hemisphere 52.8
Hippocampus, CA3
nTPM: 60.4
2137 Male, age 80, left hemisphere 71.0
2436 Male, age 74, both hemispheres 64.7
1891 Female, age 85, both hemispheres 60.5
1867 Male, age 76, both hemispheres 59.7
2620 Female, age 94, left hemisphere 59.7
2861 Female, age 67, both hemispheres 46.9
Parahippocampal cortex
nTPM: 57.3
1850 Male, age 80, both hemispheres 66.2
1933 Female, age 85, both hemispheres 64.3
2245 Female, age 91, both hemispheres 62.3
2018 Male, age 76, both hemispheres 60.7
1990 Female, age 91, right hemisphere 58.5
2532 Female, age 72, left hemisphere 58.0
2250 Female, age 67, right hemisphere 55.3
2692 Male, age 74, both hemispheres 55.0
2622 Female, age 67, right hemisphere 49.4
2693 Female, age 94, both hemispheres 42.7
Perirhinal gyrus
nTPM: 63.7
1794 Male, age 80, right hemisphere 70.5
1847 Female, age 91, left hemisphere 66.9
1841 Female, age 85, right hemisphere 65.9
2521 Female, age 94, right hemisphere 61.2
2848 Male, age 76, right hemisphere 53.8
Subiculum
nTPM: 65.0
2438 Female, age 94, left hemisphere 79.2
1977 Female, age 85, both hemispheres 67.1
2042 Male, age 76, both hemispheres 64.8
1901 Male, age 80, both hemispheres 64.6
2619 Male, age 74, both hemispheres 57.6
2729 Female, age 91, right hemisphere 56.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 138.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 138.3
Samples: 197

Max nTPM: 261.1
Min nTPM: 81.2
Std nTPM: 26.1
Median nTPM: 134.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 261.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 228.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 224.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 219.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 212.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 199.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 196.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 194.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 194.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 191.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 186.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 100.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.8
FF:10169-103B7 60 years, female 127.7
FF:10153-102I9 76 years, female 74.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 72.0
Pig sample Sample description nTPM
Subiculum
nTPM: 61.0
Samples: 4

Max nTPM: 79.0
Min nTPM: 53.4
Sample A Female 79.0
Sample B Female 57.5
Sample C Male 54.0
Sample D Male 53.4
Dorsal hippocampus
nTPM: 72.0
Samples: 4

Max nTPM: 97.0
Min nTPM: 54.4
Sample A Female 97.0
Sample B Female 65.6
Sample C Male 71.0
Sample D Male 54.4
Entorhinal cortex
nTPM: 60.6
Samples: 4

Max nTPM: 69.6
Min nTPM: 51.0
Sample A Female 60.5
Sample B Female 69.6
Sample C Male 61.3
Sample D Male 51.0
Ventral hippocampus
nTPM: 65.6
Samples: 4

Max nTPM: 74.7
Min nTPM: 48.3
Sample A Female 66.7
Sample B Female 48.3
Sample C Male 74.7
Sample D Male 72.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 175.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 175.3
Samples: 4

Max nTPM: 182.4
Min nTPM: 169.3
Sample A Male 170.4
Sample B Male 179.0
Sample C Female 182.4
Sample D Female 169.3
Hippocampal formation
nTPM: 175.8
Samples: 4

Max nTPM: 206.8
Min nTPM: 161.5
Sample A Male 206.8
Sample B Male 162.4
Sample C Female 161.5
Sample D Female 172.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
76097722 Antisense, RP_060626_01_D06, Mouse strain C57BL/6J (56 days, male) 11.6

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