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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:110.2 nTPM
GTEx:110.2 nTPM
FANTOM5:66.4 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041153Antibody HPA042031
Squamous epithelial cells LowMedium

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 110.2
Samples: 156

Max nTPM: 376.3
Min nTPM: 67.6
Std nTPM: 33.2
Median nTPM: 102.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 376.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 181.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 179.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 168.0
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 166.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 164.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 162.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 162.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 160.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 155.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 154.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 154.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 153.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 152.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 152.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 151.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 151.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 150.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 146.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 144.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 142.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 142.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 141.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 141.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 140.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 138.8
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 138.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 136.4
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 136.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 136.0
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 132.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 130.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 130.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 130.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 129.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 127.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 125.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 123.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 122.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 122.6
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 120.2
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 118.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 118.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 118.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 118.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 118.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 117.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 117.1
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 113.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 112.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 111.1
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 111.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 110.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 110.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 110.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 110.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 110.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 110.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 110.0
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 110.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 109.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 109.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 109.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 109.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 108.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 107.9
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 107.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 107.7
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 107.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 107.0
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 106.3
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 106.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 105.7
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 105.2
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 104.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 104.5
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 104.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 103.1
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 102.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 101.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 100.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 100.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 100.3
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 100.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 100.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 99.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 99.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 98.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 98.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 97.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 97.5
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 97.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 97.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 97.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 96.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 96.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 96.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 96.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 95.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 95.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 95.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 95.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 95.1
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 94.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 94.4
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 94.4
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 94.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 94.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 93.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 93.2
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 93.1
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 93.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 92.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 92.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 92.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 91.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 91.5
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 91.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 91.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 89.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 89.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 89.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 89.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 88.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 88.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 88.1
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 87.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 86.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 86.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 86.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 85.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 85.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 85.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 84.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 84.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 83.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 82.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 82.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 81.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 80.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 80.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 80.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 79.0
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 78.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 76.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 75.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 75.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 73.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 73.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 72.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 71.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 70.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 70.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 69.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 69.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 67.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

66.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 66.4
FF:10204-103F6 68 years, female 66.4

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