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  • PPP1R1B
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1417.6 nTPM
HPA Brain:1134.2 nTPM
GTEx:1417.6 nTPM
FANTOM5:1292.2 Scaled Tags Per Million
Pig:2060.7 nTPM
Mouse:1244.1 nTPM
Allen mouse:26.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA048630Antibody HPA061142Antibody CAB004026
Glial cells MediumNot detectedLow
Neuronal cells MediumNot detectedHigh






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1134.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 1134.2
2290 Female, age 72, unknown 1747.3
2846 Female, age 79, unknown 1451.1
1857 Female, age 85, left hemisphere 1440.0
1854 Male, age 80, left hemisphere 1277.2
1781 Male, age 74, unknown 977.7
2289 Male, age 61, right hemisphere 973.8
2288 Male, age 75, left hemisphere 617.5
2481 Female, age 94, left hemisphere 589.4
Globus pallidus, externus
nTPM: 309.4
2646 Male, age 61, right hemisphere 631.6
1996 Male, age 80, right hemisphere 311.3
2567 Female, age 72, unknown 240.5
2395 Male, age 75, both hemispheres 210.6
2772 Female, age 79, unknown 153.1
Globus pallidus, internus
nTPM: 241.3
2483 Female, age 94, right hemisphere 443.3
2037 Male, age 80, right hemisphere 279.7
2287 Male, age 75, right hemisphere 244.8
1818 Male, age 74, unknown 218.7
2778 Female, age 91, both hemispheres 190.1
2566 Female, age 72, unknown 184.8
2111 Female, age 85, right hemisphere 127.7
Nucleus accumbens
nTPM: 805.5
1783 Male, age 74, unknown 1360.8
1806 Female, age 85, left hemisphere 1147.5
2824 Male, age 61, right hemisphere 1105.1
2698 Female, age 72, unknown 947.5
1856 Female, age 91, right hemisphere 641.8
2286 Male, age 75, left hemisphere 556.0
2391 Female, age 94, left hemisphere 355.3
2732 Male, age 80, right hemisphere 330.3
Nucleus basalis of Meynert
nTPM: 739.9
2393 Male, age 80, right hemisphere 1192.2
2569 Male, age 61, both hemispheres 778.6
2484 Female, age 94, left hemisphere 629.2
2821 Male, age 75, both hemispheres 359.5
Nucleus of the diagonal band
nTPM: 170.4
1979 Male, age 74, unknown 193.6
1812 Female, age 91, both hemispheres 192.4
2775 Male, age 80, right hemisphere 161.3
2029 Male, age 61, right hemisphere 154.3
2195 Female, age 85, both hemispheres 150.4
Putamen
nTPM: 1081.7
1829 Male, age 74, unknown 1638.0
1838 Male, age 80, right hemisphere 1547.4
2489 Female, age 72, unknown 1385.5
2466 Female, age 79, unknown 1279.1
1937 Female, age 91, right hemisphere 627.5
2647 Male, age 75, left hemisphere 571.0
2482 Female, age 94, left hemisphere 523.4
Septal nuclei
nTPM: 169.8
2059 Female, age 85, both hemispheres 206.1
2199 Male, age 80, right hemisphere 185.8
2394 Male, age 61, left hemisphere 184.4
2629 Female, age 94, right hemisphere 162.8
1960 Male, age 74, unknown 153.0
2031 Female, age 72, unknown 148.7
2009 Female, age 91, both hemispheres 147.5
Stria terminalis, bed nucleus
nTPM: 145.8
2486 Female, age 94, both hemispheres 205.8
1974 Female, age 91, both hemispheres 130.5
2201 Male, age 74, unknown 101.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1417.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1417.6
Samples: 246

Max nTPM: 3325.4
Min nTPM: 88.4
Std nTPM: 716.9
Median nTPM: 1392.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3325.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3226.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 3150.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 3133.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3091.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2961.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 2871.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 2821.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2711.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2654.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2654.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2642.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2633.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2553.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2492.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 2478.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2461.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2425.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2417.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2403.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2400.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 2381.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2332.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 2330.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2316.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2297.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 2288.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 2288.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2281.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2276.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 2268.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 2267.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2249.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2239.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2232.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 2225.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 2203.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 2196.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2188.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 2180.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 2173.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2161.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2149.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 2147.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 2143.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 2133.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2131.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 2126.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 2119.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 2112.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 2079.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 2071.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 2054.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2046.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 2045.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 2036.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 2035.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2026.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1996.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1994.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1984.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1984.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1974.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1969.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1967.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1947.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1941.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1935.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1928.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1907.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1896.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1871.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1863.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1859.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1854.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1847.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1846.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1832.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1830.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1825.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1798.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1797.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1794.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1793.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1780.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1751.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1746.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1733.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1732.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1722.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1709.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1703.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1695.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1692.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1678.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1677.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1667.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1625.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1606.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1600.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1593.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1591.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1584.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1577.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1570.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1566.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1556.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1553.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1551.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1537.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1530.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1519.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1487.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1485.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1484.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1474.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1473.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1457.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1429.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1429.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1425.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1413.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1401.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1384.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1364.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1364.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1359.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1337.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1323.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1318.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1318.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1311.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1302.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1301.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1290.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1286.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1264.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1241.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1233.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1231.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1201.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1183.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1179.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1172.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1169.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1164.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1147.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1130.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1128.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1119.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1117.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1110.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1106.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1086.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1072.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1066.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1059.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1027.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1020.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1016.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 998.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 992.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 982.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 979.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 979.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 978.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 967.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 954.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 953.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 943.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 937.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 921.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 915.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 907.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 905.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 904.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 870.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 865.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 824.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 815.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 814.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 811.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 775.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 769.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 768.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 764.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 758.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 753.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 743.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 723.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 713.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 713.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 692.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 688.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 685.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 677.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 672.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 667.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 646.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 644.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 633.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 629.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 621.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 608.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 607.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 606.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 591.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 583.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 579.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 561.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 560.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 553.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 550.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 542.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 530.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 521.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 518.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 517.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 501.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 499.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 498.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 494.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 494.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 487.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 484.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 471.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 466.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 464.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 459.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 459.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 448.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 440.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 424.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 416.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 395.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 392.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 391.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 389.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 380.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 360.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 345.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 329.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 315.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 311.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 198.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 88.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1076.1
Samples: 246

Max nTPM: 3132.8
Min nTPM: 28.1
Std nTPM: 488.4
Median nTPM: 1088.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 3132.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 2763.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 2404.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 2200.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 2103.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 2096.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 2044.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1991.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1969.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1904.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1900.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1864.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1841.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1827.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1814.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1807.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1797.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 1781.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1758.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1757.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1740.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1705.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1668.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1656.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1644.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1640.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1631.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1608.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1607.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1600.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1581.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1571.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1566.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1566.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1556.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1554.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1539.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1537.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1502.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1501.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1491.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 1480.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1470.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1463.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1461.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1459.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1456.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1453.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1446.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1445.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1444.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1434.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1431.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1421.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 1418.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1415.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1401.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1395.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1391.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1388.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 1383.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1359.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 1354.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1354.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1350.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1347.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1344.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1343.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 1339.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1339.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1333.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 1333.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1332.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 1327.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 1326.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 1317.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1316.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1314.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1310.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 1308.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1293.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1283.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1283.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1282.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1281.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1276.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1271.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1268.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 1266.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1255.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1255.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1248.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1230.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1224.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1223.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1220.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1216.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1202.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1199.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 1194.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1191.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1184.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 1183.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1180.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1170.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1164.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1162.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 1153.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1146.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1135.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 1134.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 1131.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1121.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1113.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 1110.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 1109.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1097.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1097.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1095.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1092.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1092.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1091.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 1090.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1085.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 1082.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1082.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1081.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1074.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1070.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1066.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1065.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1062.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1058.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1053.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 1035.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1022.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 1021.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 1019.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1014.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1011.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1009.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1008.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1001.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 995.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 992.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 989.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 978.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 976.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 971.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 971.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 968.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 964.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 958.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 945.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 943.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 933.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 933.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 928.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 926.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 923.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 897.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 889.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 872.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 870.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 850.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 841.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 833.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 808.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 802.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 802.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 801.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 794.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 793.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 787.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 787.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 786.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 780.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 778.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 770.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 756.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 752.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 751.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 746.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 743.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 735.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 734.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 712.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 697.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 690.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 689.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 688.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 687.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 681.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 666.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 661.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 656.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 651.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 645.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 642.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 641.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 639.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 614.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 598.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 594.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 592.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 584.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 584.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 579.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 566.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 551.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 549.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 544.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 540.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 526.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 515.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 513.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 497.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 494.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 478.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 458.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 456.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 451.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 424.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 412.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 381.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 370.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 367.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 366.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 345.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 336.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 313.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 305.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 300.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 289.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 278.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 269.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 241.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 209.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 152.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 148.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 121.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 112.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 109.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 108.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 103.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 28.1
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Brain - Putamen (basal ganglia)
Average nTPM: 1376.4
Samples: 205

Max nTPM: 3114.1
Min nTPM: 197.0
Std nTPM: 747.8
Median nTPM: 1401.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 3114.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 3036.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 3032.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 3016.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 2999.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 2985.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2961.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 2923.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 2820.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 2814.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 2769.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 2750.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 2697.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 2653.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 2611.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 2596.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 2560.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 2450.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 2441.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 2400.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 2333.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 2320.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 2310.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 2306.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 2298.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 2289.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 2273.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 2262.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 2260.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 2247.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 2235.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 2232.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 2204.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 2192.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 2180.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 2165.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 2135.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 2121.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 2116.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 2101.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 2058.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 2054.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 2051.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 2048.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 2033.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 2017.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1996.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1963.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1961.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1936.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1930.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 1922.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1911.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1904.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1896.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1876.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1866.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1832.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1831.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1805.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 1775.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1749.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1748.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1725.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1719.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 1716.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1716.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1714.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1704.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1671.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1656.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1647.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1647.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1642.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1641.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1632.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1628.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1621.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1607.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1599.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1595.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1592.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 1581.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1572.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1564.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1529.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1528.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1520.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1508.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1501.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1487.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 1487.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1479.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1478.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1475.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1464.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1451.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1420.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1420.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1416.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 1404.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1403.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1401.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1384.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1384.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1352.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1333.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1290.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1254.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1253.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1244.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1218.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1197.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1194.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1191.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1137.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1116.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1107.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1103.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1097.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1088.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1081.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1047.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 999.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 988.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 986.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 973.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 969.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 957.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 948.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 946.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 909.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 891.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 882.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 853.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 849.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 843.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 839.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 828.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 823.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 809.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 806.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 779.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 771.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 765.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 762.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 761.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 752.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 736.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 734.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 725.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 699.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 698.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 697.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 688.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 688.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 684.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 682.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 680.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 669.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 662.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 652.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 638.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 638.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 634.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 602.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 592.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 591.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 583.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 577.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 562.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 533.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 525.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 507.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 501.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 495.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 494.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 493.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 492.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 483.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 483.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 479.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 475.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 473.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 454.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 445.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 443.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 442.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 436.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 429.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 423.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 403.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 398.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 390.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 390.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 386.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 382.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 357.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 354.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 349.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 328.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 325.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 294.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 209.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 197.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1292.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1200.8
FF:10164-103B2 76 years, female 1200.8
Nucleus accumbens
Scaled Tags Per Million: 798.5
FF:10037-101F1 23-56 years, mixed 798.5
Putamen
Scaled Tags Per Million: 1292.2
FF:10176-103C5 60 years, female 1292.2
Globus pallidus
Scaled Tags Per Million: 396.7
FF:10175-103C4 60 years, female 455.9
FF:10161-103A8 76 years, female 337.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2060.7
Pig sample Sample description nTPM
Caudate
nTPM: 1790.5
Samples: 4

Max nTPM: 2505.3
Min nTPM: 1252.2
Sample A Female 1252.2
Sample B Female 1508.0
Sample C Male 2505.3
Sample D Male 1896.6
Putamen
nTPM: 2060.7
Samples: 4

Max nTPM: 3531.8
Min nTPM: 520.3
Sample A Female 520.3
Sample B Female 1835.1
Sample C Male 3531.8
Sample D Male 2355.5
Septum
nTPM: 349.9
Samples: 4

Max nTPM: 731.5
Min nTPM: 27.5
Sample A Female 731.5
Sample B Female 555.7
Sample C Male 27.5
Sample D Male 85.0
Ventral pallidum
nTPM: 811.9
Samples: 4

Max nTPM: 1173.9
Min nTPM: 161.9
Sample A Female 1173.9
Sample B Female 969.7
Sample C Male 161.9
Sample D Male 942.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1244.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1244.2
Samples: 4

Max nTPM: 1422.2
Min nTPM: 1076.8
Sample A Male 1362.2
Sample B Male 1422.2
Sample C Female 1076.8
Sample D Female 1115.4
Septum
nTPM: 75.3
Samples: 4

Max nTPM: 92.7
Min nTPM: 55.3
Sample A Male 89.8
Sample B Male 55.3
Sample C Female 63.2
Sample D Female 92.7
Ventral forebrain
nTPM: 599.5
Samples: 4

Max nTPM: 673.3
Min nTPM: 547.9
Sample A Male 594.9
Sample B Male 581.7
Sample C Female 673.3
Sample D Female 547.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

26.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 26.3
576432 Antisense, RP_040826_01_H06, Mouse strain C57BL/6J (56 days, male) 27.6
73732146 Antisense, RP_051121_04_A04, Mouse strain C57BL/6J (56 days, male) 25.1
Pallidum
Expression energy: 11.6
576432 Antisense, RP_040826_01_H06, Mouse strain C57BL/6J (56 days, male) 19.4
73732146 Antisense, RP_051121_04_A04, Mouse strain C57BL/6J (56 days, male) 3.8

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