We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RAMP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RAMP1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:205.5 nTPM
HPA Brain:128.6 nTPM
GTEx:205.5 nTPM
FANTOM5:72.5 Scaled Tags Per Million
Pig:265.2 nTPM
Mouse:63.1 nTPM
Allen mouse:0.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 108.0
1857 Female, age 85, left hemisphere 148.2
2290 Female, age 72, unknown 128.4
1854 Male, age 80, left hemisphere 127.3
2481 Female, age 94, left hemisphere 109.0
1781 Male, age 74, unknown 98.5
2289 Male, age 61, right hemisphere 94.9
2846 Female, age 79, unknown 80.5
2288 Male, age 75, left hemisphere 76.9
Globus pallidus, externus
nTPM: 128.6
1996 Male, age 80, right hemisphere 175.8
2646 Male, age 61, right hemisphere 145.5
2772 Female, age 79, unknown 126.7
2567 Female, age 72, unknown 99.3
2395 Male, age 75, both hemispheres 95.6
Globus pallidus, internus
nTPM: 117.4
2037 Male, age 80, right hemisphere 152.7
2483 Female, age 94, right hemisphere 141.8
1818 Male, age 74, unknown 117.4
2287 Male, age 75, right hemisphere 115.9
2778 Female, age 91, both hemispheres 105.1
2566 Female, age 72, unknown 98.9
2111 Female, age 85, right hemisphere 90.3
Nucleus accumbens
nTPM: 117.3
1806 Female, age 85, left hemisphere 157.6
1856 Female, age 91, right hemisphere 134.1
2732 Male, age 80, right hemisphere 126.5
2698 Female, age 72, unknown 122.4
1783 Male, age 74, unknown 119.3
2286 Male, age 75, left hemisphere 100.3
2824 Male, age 61, right hemisphere 94.2
2391 Female, age 94, left hemisphere 83.7
Nucleus basalis of Meynert
nTPM: 115.3
2569 Male, age 61, both hemispheres 167.1
2393 Male, age 80, right hemisphere 117.7
2484 Female, age 94, left hemisphere 103.2
2821 Male, age 75, both hemispheres 73.2
Nucleus of the diagonal band
nTPM: 105.5
1979 Male, age 74, unknown 147.0
2195 Female, age 85, both hemispheres 104.2
1812 Female, age 91, both hemispheres 103.4
2775 Male, age 80, right hemisphere 100.7
2029 Male, age 61, right hemisphere 72.5
Putamen
nTPM: 102.8
1838 Male, age 80, right hemisphere 120.6
2647 Male, age 75, left hemisphere 108.7
2489 Female, age 72, unknown 108.4
1937 Female, age 91, right hemisphere 102.6
2482 Female, age 94, left hemisphere 100.5
2466 Female, age 79, unknown 94.5
1829 Male, age 74, unknown 84.6
Septal nuclei
nTPM: 105.2
2199 Male, age 80, right hemisphere 155.0
2059 Female, age 85, both hemispheres 140.3
2009 Female, age 91, both hemispheres 100.3
1960 Male, age 74, unknown 98.6
2394 Male, age 61, left hemisphere 85.7
2031 Female, age 72, unknown 83.3
2629 Female, age 94, right hemisphere 73.2
Stria terminalis, bed nucleus
nTPM: 77.0
2201 Male, age 74, unknown 91.7
1974 Female, age 91, both hemispheres 77.0
2486 Female, age 94, both hemispheres 62.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 150.0
Samples: 246

Max nTPM: 370.7
Min nTPM: 48.1
Std nTPM: 48.0
Median nTPM: 140.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 370.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 302.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 292.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 290.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 275.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 263.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 261.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 259.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 259.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 258.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 244.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 240.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 239.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 239.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 237.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 236.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 236.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 236.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 235.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 227.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 223.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 222.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 221.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 221.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 214.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 210.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 209.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 207.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 207.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 207.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 205.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 204.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 199.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 197.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 197.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 196.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 194.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 193.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 192.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 192.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 191.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 191.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 190.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 190.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 189.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 189.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 187.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 187.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 187.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 186.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 184.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 183.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 183.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 183.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 181.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 179.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 179.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 179.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 178.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 178.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 177.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 177.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 177.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 176.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 175.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 173.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 171.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 171.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 170.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 169.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 169.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 167.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 167.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 166.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 166.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 165.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 164.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 163.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 163.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 163.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 160.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 160.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 160.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 159.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 159.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 158.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 158.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 157.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 157.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 157.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 157.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 156.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 155.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 154.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 153.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 153.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 152.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 152.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 151.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 150.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 150.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 149.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 149.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 148.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 148.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 147.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 147.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 147.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 146.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 146.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 145.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 145.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 144.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 144.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 144.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 143.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 142.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 142.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 141.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 141.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 140.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 140.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 140.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 139.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 139.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 139.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 138.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 138.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 138.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 137.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 137.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 136.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 136.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 136.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 136.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 135.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 135.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 135.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 134.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 134.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 133.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 133.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 132.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 132.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 132.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 131.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 130.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 129.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 128.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 128.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 127.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 127.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 127.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 127.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 126.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 126.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 126.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 126.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 126.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 126.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 125.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 125.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 124.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 124.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 124.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 123.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 123.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 122.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 120.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 120.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 120.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 120.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 118.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 118.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 118.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 118.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 117.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 117.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 117.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 116.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 116.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 116.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 116.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 115.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 115.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 115.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 115.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 114.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 114.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 113.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 113.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 112.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 112.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 111.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 111.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 111.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 111.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 110.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 109.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 109.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 109.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 109.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 108.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 107.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 107.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 107.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 107.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 106.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 106.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 106.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 106.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 106.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 106.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 106.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 105.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 105.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 103.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 102.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 101.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 100.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 99.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 97.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 97.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 93.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 92.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 92.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 92.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 91.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 90.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 89.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 88.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 87.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 87.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 85.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 82.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 81.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 81.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 74.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 73.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 72.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 57.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 54.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 48.1
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 205.5
Samples: 246

Max nTPM: 878.5
Min nTPM: 59.9
Std nTPM: 88.9
Median nTPM: 189.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 878.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 712.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 508.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 432.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 401.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 399.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 398.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 396.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 393.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 390.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 385.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 372.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 364.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 348.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 331.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 331.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 319.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 319.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 315.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 302.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 302.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 299.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 295.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 294.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 294.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 293.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 291.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 286.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 285.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 284.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 283.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 280.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 279.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 274.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 273.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 271.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 270.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 269.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 268.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 267.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 263.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 261.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 260.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 259.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 259.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 257.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 256.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 256.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 256.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 255.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 255.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 254.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 251.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 249.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 246.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 245.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 245.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 244.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 244.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 243.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 243.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 242.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 241.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 239.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 238.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 237.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 235.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 233.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 231.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 230.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 228.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 226.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 224.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 223.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 223.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 221.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 221.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 220.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 219.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 219.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 218.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 215.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 214.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 213.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 213.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 212.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 212.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 212.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 211.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 210.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 210.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 210.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 210.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 209.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 209.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 207.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 206.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 206.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 205.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 202.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 201.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 201.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 200.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 200.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 200.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 199.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 198.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 197.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 197.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 196.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 196.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 195.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 195.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 194.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 194.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 194.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 192.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 192.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 192.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 191.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 191.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 190.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 190.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 188.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 188.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 188.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 187.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 187.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 186.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 186.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 186.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 184.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 184.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 182.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 182.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 181.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 181.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 180.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 180.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 177.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 177.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 176.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 175.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 175.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 174.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 174.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 173.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 172.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 172.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 172.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 171.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 170.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 169.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 169.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 168.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 168.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 167.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 167.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 167.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 167.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 165.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 165.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 164.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 164.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 164.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 163.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 163.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 161.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 160.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 159.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 159.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 158.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 158.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 158.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 157.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 157.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 156.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 154.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 154.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 154.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 153.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 153.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 153.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 153.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 152.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 152.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 152.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 152.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 151.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 151.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 151.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 150.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 150.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 149.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 148.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 146.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 144.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 142.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 142.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 141.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 141.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 141.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 139.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 139.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 136.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 135.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 135.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 135.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 133.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 133.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 132.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 131.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 131.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 130.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 129.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 128.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 128.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 127.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 126.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 123.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 122.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 121.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 120.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 120.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 119.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 118.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 116.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 115.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 115.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 113.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 110.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 110.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 108.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 106.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 106.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 106.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 106.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 103.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 100.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 99.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 99.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 96.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 95.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 95.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 85.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 59.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 167.8
Samples: 205

Max nTPM: 399.0
Min nTPM: 80.5
Std nTPM: 56.6
Median nTPM: 155.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 399.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 396.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 350.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 348.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 326.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 306.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 302.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 296.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 290.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 288.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 285.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 283.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 273.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 269.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 264.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 263.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 254.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 253.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 252.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 247.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 241.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 236.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 235.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 234.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 233.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 231.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 225.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 224.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 224.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 224.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 222.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 221.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 221.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 217.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 211.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 210.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 208.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 207.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 205.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 204.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 204.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 201.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 201.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 199.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 196.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 195.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 195.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 195.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 195.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 194.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 193.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 191.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 190.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 190.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 189.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 189.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 187.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 187.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 186.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 182.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 181.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 180.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 180.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 179.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 179.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 179.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 178.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 177.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 175.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 173.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 173.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 173.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 173.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 172.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 172.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 171.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 169.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 168.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 168.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 168.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 168.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 167.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 167.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 164.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 164.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 164.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 163.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 162.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 161.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 160.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 160.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 159.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 158.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 158.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 158.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 157.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 157.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 157.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 157.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 156.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 156.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 155.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 155.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 155.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 155.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 153.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 153.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 153.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 152.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 152.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 151.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 150.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 150.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 150.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 149.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 148.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 148.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 148.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 147.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 147.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 147.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 146.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 144.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 144.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 144.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 143.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 142.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 142.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 141.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 141.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 141.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 140.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 140.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 139.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 137.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 137.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 137.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 136.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 135.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 134.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 134.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 134.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 134.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 132.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 132.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 131.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 131.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 131.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 131.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 130.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 130.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 130.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 130.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 130.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 129.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 129.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 128.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 128.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 128.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 126.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 125.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 125.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 124.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 123.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 122.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 122.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 122.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 121.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 121.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 119.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 119.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 118.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 118.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 118.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 117.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 117.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 117.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 117.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 116.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 115.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 115.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 115.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 112.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 110.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 109.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 109.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 108.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 107.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 106.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 106.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 106.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 102.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 102.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 101.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 100.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 99.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 98.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 97.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 96.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 95.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 95.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 91.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 91.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 86.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 80.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

72.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 72.5
FF:10164-103B2 76 years, female 72.5
Nucleus accumbens
Scaled Tags Per Million: 30.5
FF:10037-101F1 23-56 years, mixed 30.5
Putamen
Scaled Tags Per Million: 51.9
FF:10176-103C5 60 years, female 51.9
Globus pallidus
Scaled Tags Per Million: 50.8
FF:10161-103A8 76 years, female 56.1
FF:10175-103C4 60 years, female 45.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

265.2
Pig sample Sample description nTPM
Caudate
nTPM: 265.2
Samples: 4

Max nTPM: 315.4
Min nTPM: 192.3
Sample A Female 254.7
Sample B Female 298.2
Sample C Male 315.4
Sample D Male 192.3
Putamen
nTPM: 214.5
Samples: 4

Max nTPM: 238.8
Min nTPM: 185.1
Sample A Female 198.7
Sample B Female 185.1
Sample C Male 238.8
Sample D Male 235.2
Septum
nTPM: 159.2
Samples: 4

Max nTPM: 240.6
Min nTPM: 81.9
Sample A Female 240.6
Sample B Female 194.1
Sample C Male 120.3
Sample D Male 81.9
Ventral pallidum
nTPM: 196.4
Samples: 4

Max nTPM: 249.0
Min nTPM: 134.2
Sample A Female 195.7
Sample B Female 249.0
Sample C Male 134.2
Sample D Male 206.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 60.6
Samples: 4

Max nTPM: 71.6
Min nTPM: 52.6
Sample A Male 62.7
Sample B Male 71.6
Sample C Female 52.6
Sample D Female 55.5
Septum
nTPM: 44.0
Samples: 4

Max nTPM: 46.7
Min nTPM: 38.5
Sample A Male 46.7
Sample B Male 45.1
Sample C Female 45.8
Sample D Female 38.5
Ventral forebrain
nTPM: 63.1
Samples: 4

Max nTPM: 74.8
Min nTPM: 57.9
Sample A Male 59.5
Sample B Male 60.3
Sample C Female 74.8
Sample D Female 57.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
1912 Antisense, RP_040428_01_C05, Mouse strain C57BL/6J (56 days, male) 0.1
1913 Antisense, RP_040428_01_C05, Mouse strain C57BL/6J (56 days, male) 0.1
68498944 Antisense, RP_050113_02_F08, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
1912 Antisense, RP_040428_01_C05, Mouse strain C57BL/6J (56 days, male) 0.0
1913 Antisense, RP_040428_01_C05, Mouse strain C57BL/6J (56 days, male) 0.0
68498944 Antisense, RP_050113_02_F08, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org