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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAN is not prognostic in Glioblastoma Multiforme (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
734.7
Number of samples
141
Samples
Sample
Description
pTPM
TCGA-32-5222-01A
66 years, male, white, stage:'--, dead, 585 days
1414.8
TCGA-27-2521-01A
34 years, male, white, stage:'--, dead, 510 days
1346.8
TCGA-06-5416-01A
23 years, female, white, stage:'--, alive, 204 days
1266.6
TCGA-06-5413-01A
67 years, male, white, stage:'--, alive, 268 days
1255.1
TCGA-12-5295-01A
60 years, female, white, stage:'--, dead, 454 days
1217.9
TCGA-28-5208-01A
52 years, male, white, stage:'--, dead, 544 days
1132.0
TCGA-14-0871-01A
74 years, female, white, stage:'--, dead, 880 days
1065.8
TCGA-02-2483-01A
43 years, male, asian, stage:'--, alive, 466 days
1063.8
TCGA-28-5204-01A
72 years, male, white, stage:'--, dead, 454 days
1059.5
TCGA-76-4925-01A
76 years, male, white, stage:'--, dead, 146 days
1040.0
TCGA-27-2524-01A
56 years, male, white, stage:'--, dead, 231 days
1026.8
TCGA-14-1825-01A
70 years, male, white, stage:'--, dead, 232 days
1017.3
TCGA-28-5220-01A
67 years, male, white, stage:'--, dead, 388 days
999.0
TCGA-06-0178-01A
38 years, male, white, stage:'--, dead, 2681 days
971.7
TCGA-32-2634-01A
82 years, male, white, stage:'--, alive, 693 days
959.1
TCGA-12-0616-01A
36 years, female, white, stage:'--, dead, 448 days
956.2
TCGA-28-2509-01A
77 years, female, white, stage:'--, alive, 145 days
949.4
TCGA-06-0156-01A
57 years, male, white, stage:'--, dead, 178 days
948.5
TCGA-06-5408-01A
54 years, female, white, stage:'--, dead, 357 days
946.4
TCGA-27-2523-01A
63 years, male, white, stage:'--, dead, 489 days
937.2
TCGA-19-5960-01A
56 years, male, white, stage:'--, dead, 455 days
936.1
TCGA-12-3653-01A
34 years, female, white, stage:'--, dead, 442 days
932.7
TCGA-06-0219-01A
67 years, male, white, stage:'--, dead, 22 days
927.2
TCGA-12-0821-01A
62 years, male, white, stage:'--, dead, 323 days
919.4
TCGA-12-3650-01A
46 years, male, white, stage:'--, dead, 333 days
919.1
TCGA-12-5299-01A
56 years, female, white, stage:'--, dead, 98 days
909.5
TCGA-06-2558-01A
75 years, female, white, stage:'--, dead, 380 days
899.1
TCGA-76-4931-01A
70 years, female, white, stage:'--, dead, 279 days
895.4
TCGA-26-5132-01A
74 years, male, white, stage:'--, alive, 286 days
883.3
TCGA-06-0644-01A
71 years, male, black or african american, stage:'--, dead, 384 days
880.2
TCGA-06-0745-01A
59 years, male, white, stage:'--, dead, 239 days
873.4
TCGA-06-0130-01A
54 years, male, white, stage:'--, dead, 394 days
870.6
TCGA-41-5651-01A
59 years, female, black or african american, stage:'--, dead, 460 days
869.7
TCGA-76-4932-01A
50 years, female, white, stage:'--, dead, 1458 days
860.4
TCGA-28-5207-01A
71 years, male, white, stage:'--, dead, 343 days
857.7
TCGA-27-1831-01A
66 years, male, white, stage:'--, dead, 505 days
857.3
TCGA-28-5209-01A
66 years, female, white, stage:'--, alive, 442 days
851.4
TCGA-12-3652-01A
60 years, male, white, stage:'--, dead, 1062 days
846.9
TCGA-06-0686-01A
53 years, male, white, stage:'--, dead, 432 days
845.9
TCGA-06-5856-01A
58 years, male, white, stage:'--, dead, 114 days
841.1
TCGA-06-5411-01A
51 years, male, white, stage:'--, dead, 254 days
837.9
TCGA-15-0742-01A
65 years, male, white, stage:'--, dead, 419 days
829.5
TCGA-02-2485-01A
53 years, male, black or african american, stage:'--, alive, 470 days
826.6
TCGA-06-0238-01A
46 years, male, white, stage:'--, dead, 405 days
821.4
TCGA-06-5417-01A
45 years, female, white, stage:'--, alive, 155 days
821.3
TCGA-06-0174-01A
54 years, male, white, stage:'--, dead, 98 days
816.4
TCGA-06-5858-01A
45 years, female, white, stage:'--, alive, 187 days
807.3
TCGA-14-0817-01A
69 years, female, white, stage:'--, dead, 164 days
807.1
TCGA-19-4065-01A
36 years, male, white, stage:'--, alive, 214 days
794.7
TCGA-32-4213-01A
47 years, female, white, stage:'--, alive, 604 days
784.5
TCGA-32-2616-01A
48 years, female, white, stage:'--, dead, 224 days
781.8
TCGA-14-2554-01A
52 years, female, white, stage:'--, dead, 532 days
778.7
TCGA-06-2567-01A
65 years, male, white, stage:'--, dead, 133 days
778.0
TCGA-26-5133-01A
59 years, male, white, stage:'--, alive, 452 days
764.7
TCGA-06-2559-01A
83 years, male, white, stage:'--, dead, 150 days
761.7
TCGA-41-2572-01A
67 years, male, white, stage:'--, dead, 406 days
746.4
TCGA-28-2514-01A
45 years, male, asian, stage:'--, alive, 160 days
741.0
TCGA-06-0129-01A
30 years, male, asian, stage:'--, dead, 1024 days
738.0
TCGA-76-4927-01A
58 years, male, white, stage:'--, dead, 535 days
733.1
TCGA-14-0787-01A
69 years, male, asian, stage:'--, dead, 68 days
731.2
TCGA-06-0125-01A
63 years, female, white, stage:'--, dead, 1448 days
730.9
TCGA-26-5134-01A
74 years, male, white, stage:'--, alive, 167 days
730.5
TCGA-06-5412-01A
78 years, female, white, stage:'--, dead, 138 days
730.1
TCGA-28-5216-01A
52 years, male, white, stage:'--, alive, 415 days
722.7
TCGA-28-5215-01A
62 years, female, white, stage:'--, dead, 335 days
717.3
TCGA-14-1034-01A
60 years, female, stage:'--, dead, 485 days
714.7
TCGA-06-5859-01A
63 years, male, white, stage:'--, alive, 139 days
713.8
TCGA-06-2563-01A
72 years, female, white, stage:'--, alive, 932 days
712.9
TCGA-76-4929-01A
76 years, female, white, stage:'--, dead, 111 days
706.1
TCGA-06-2570-01A
21 years, female, white, stage:'--, alive, 958 days
701.5
TCGA-28-1753-01A
53 years, male, white, stage:'--, alive, 37 days
695.8
TCGA-08-0386-01A
74 years, male, white, stage:'--, dead, 548 days
693.2
TCGA-06-5418-01A
75 years, female, white, stage:'--, dead, 83 days
690.5
TCGA-06-2569-01A
24 years, female, black or african american, stage:'--, alive, 13 days
689.9
TCGA-28-5218-01A
63 years, male, white, stage:'--, dead, 157 days
687.7
TCGA-12-0618-01A
49 years, male, white, stage:'--, dead, 395 days
687.5
TCGA-02-2486-01A
64 years, male, white, stage:'--, dead, 618 days
686.0
TCGA-06-2561-01A
53 years, female, white, stage:'--, dead, 537 days
684.7
TCGA-06-0211-01A
47 years, male, white, stage:'--, dead, 360 days
679.5
TCGA-32-2615-01A
62 years, male, white, stage:'--, dead, 485 days
677.0
TCGA-06-5414-01A
61 years, male, white, stage:'--, alive, 273 days
674.0
TCGA-19-2619-01A
55 years, female, black or african american, stage:'--, alive, 294 days
673.0
TCGA-02-0055-01A
62 years, female, white, stage:'--, dead, 76 days
672.9
TCGA-41-2571-01A
89 years, male, white, stage:'--, dead, 26 days
668.9
TCGA-06-0210-01A
72 years, female, white, stage:'--, dead, 225 days
667.2
TCGA-27-2528-01A
62 years, male, white, stage:'--, dead, 480 days
665.3
TCGA-06-2562-01A
81 years, male, white, stage:'--, dead, 382 days
664.4
TCGA-06-0157-01A
63 years, female, white, stage:'--, dead, 97 days
659.3
TCGA-06-0139-01A
40 years, male, white, stage:'--, dead, 362 days
653.6
TCGA-06-5410-01A
72 years, female, white, stage:'--, dead, 108 days
646.8
TCGA-26-5139-01A
65 years, female, white, stage:'--, alive, 48 days
644.1
TCGA-26-5135-01A
72 years, female, white, stage:'--, dead, 270 days
642.1
TCGA-32-1970-01A
59 years, male, white, stage:'--, dead, 468 days
638.0
TCGA-06-0744-01A
66 years, male, white, stage:'--, dead, 1426 days
637.8
TCGA-06-0646-01A
60 years, male, white, stage:'--, dead, 175 days
633.1
TCGA-06-0168-01A
59 years, female, white, stage:'--, dead, 598 days
629.4
TCGA-14-1823-01A
58 years, female, white, stage:'--, dead, 543 days
629.1
TCGA-27-2526-01A
79 years, female, white, stage:'--, dead, 87 days
628.7
TCGA-19-2629-01A
60 years, male, white, stage:'--, dead, 737 days
624.1
TCGA-06-1804-01A
81 years, female, white, stage:'--, dead, 414 days
623.0
TCGA-32-2632-01A
80 years, male, white, stage:'--, dead, 269 days
623.0
TCGA-06-2564-01A
50 years, male, white, stage:'--, alive, 181 days
619.5
TCGA-06-0882-01A
30 years, male, white, stage:'--, dead, 632 days
617.1
TCGA-06-0878-01A
74 years, male, white, stage:'--, alive, 218 days
612.8
TCGA-06-0138-01A
43 years, male, white, stage:'--, dead, 737 days
607.9
TCGA-41-3915-01A
48 years, male, white, stage:'--, dead, 360 days
606.0
TCGA-19-2624-01A
51 years, male, white, stage:'--, dead, 5 days
605.8
TCGA-06-2565-01A
59 years, male, asian, stage:'--, dead, 506 days
605.7
TCGA-06-2557-01A
76 years, male, black or african american, stage:'--, dead, 33 days
600.7
TCGA-06-0190-01A
62 years, male, white, stage:'--, dead, 317 days
593.6
TCGA-15-1444-01A
21 years, male, white, stage:'--, dead, 1537 days
576.1
TCGA-19-1390-01A
63 years, female, white, stage:'--, dead, 772 days
574.3
TCGA-27-1830-01A
57 years, male, white, stage:'--, dead, 154 days
573.0
TCGA-02-0047-01A
78 years, male, white, stage:'--, dead, 448 days
566.7
TCGA-32-1982-01A
76 years, female, white, stage:'--, dead, 142 days
564.1
TCGA-27-1837-01A
36 years, male, white, stage:'--, dead, 427 days
559.5
TCGA-06-0645-01A
55 years, female, white, stage:'--, dead, 175 days
559.5
TCGA-28-2513-01A
69 years, female, white, stage:'--, alive, 222 days
558.0
TCGA-32-1980-01A
72 years, male, white, stage:'--, dead, 36 days
555.1
TCGA-27-1832-01A
59 years, female, white, stage:'--, dead, 300 days
546.3
TCGA-06-0141-01A
62 years, male, white, stage:'--, dead, 313 days
539.3
TCGA-19-2625-01A
76 years, female, white, stage:'--, dead, 124 days
534.8
TCGA-06-0158-01A
73 years, male, white, stage:'--, dead, 329 days
532.2
TCGA-06-0132-01A
49 years, male, white, stage:'--, dead, 771 days
529.2
TCGA-14-1829-01A
57 years, male, black or african american, stage:'--, alive, 218 days
525.0
TCGA-12-0619-01A
60 years, male, white, stage:'--, dead, 1062 days
516.0
TCGA-06-0749-01A
50 years, male, black or african american, stage:'--, dead, 82 days
515.8
TCGA-32-2638-01A
67 years, male, white, stage:'--, dead, 766 days
515.8
TCGA-41-4097-01A
63 years, female, white, stage:'--, dead, 6 days
512.5
TCGA-06-0747-01A
53 years, male, white, stage:'--, dead, 82 days
505.0
TCGA-06-0750-01A
43 years, male, white, stage:'--, dead, 28 days
498.3
TCGA-27-2519-01A
48 years, male, white, stage:'--, dead, 550 days
492.3
TCGA-27-1834-01A
56 years, male, white, stage:'--, dead, 1233 days
489.2
TCGA-06-0743-01A
69 years, male, white, stage:'--, dead, 803 days
481.4
TCGA-16-0846-01A
85 years, male, white, stage:'--, dead, 119 days
465.9
TCGA-14-0789-01A
54 years, male, white, stage:'--, dead, 342 days
461.0
TCGA-19-2620-01A
70 years, male, white, stage:'--, dead, 148 days
384.4
TCGA-27-1835-01A
53 years, female, white, stage:'--, dead, 648 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAN is not prognostic in Glioblastoma Multiforme (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
285.9
Number of samples
58
Samples
Sample
Description
pTPM
AK156
N, NA, stage:NA, dead, 330 days
533.5
AK043
N, NA, stage:NA, alive, 660 days
409.0
AK199
N, NA, stage:NA, alive, 1860 days
401.3
AK124
N, NA, stage:NA, alive, 1920 days
399.9
AK142
N, NA, stage:NA, alive, 90 days
376.9
AK074
N, NA, stage:NA, alive, 300 days
358.3
AK231
N, NA, stage:NA, dead, 240 days
355.8
AK002
N, NA, stage:NA, dead, 570 days
355.5
AK173
N, NA, stage:NA, dead, 180 days
353.0
AK165
N, NA, stage:NA, alive, 360 days
352.3
AK133
N, NA, stage:NA, dead, 360 days
352.1
AK236
N, NA, stage:NA, dead, 360 days
350.1
AK081
N, NA, stage:NA, dead, 180 days
334.6
AK068
N, NA, stage:NA, alive, 360 days
333.5
AK072
N, NA, stage:NA, dead, 150 days
321.5
AK185
N, NA, stage:NA, alive, 330 days
316.3
AK071
N, NA, stage:NA, dead, 540 days
312.4
AK098
N, NA, stage:NA, dead, 660 days
310.4
AK051
N, NA, stage:NA, dead, 360 days
309.9
AK183
N, NA, stage:NA, alive, 360 days
309.2
AK227
N, NA, stage:NA, alive, 300 days
306.7
AK216
N, NA, stage:NA, dead, 360 days
304.3
AK123
N, NA, stage:NA, dead, 180 days
304.0
AK153
N, NA, stage:NA, dead, 240 days
293.1
AK158
N, NA, stage:NA, dead, 360 days
293.0
AK149
N, NA, stage:NA, dead, 420 days
278.7
AK053
N, NA, stage:NA, dead, 300 days
276.4
AK117
N, NA, stage:NA, dead, 210 days
275.3
AK195
N, NA, stage:NA, dead, 390 days
275.0
AK213
N, NA, stage:NA, alive, 2010 days
272.7
AK100
N, NA, stage:NA, alive, 960 days
271.9
AK055
N, NA, stage:NA, dead, 240 days
266.4
AK079
N, NA, stage:NA, dead, 210 days
265.4
AK066
N, NA, stage:NA, alive, 960 days
262.4
AK035
N, NA, stage:NA, dead, 210 days
261.2
AK089
N, NA, stage:NA, dead, 330 days
260.6
AK049
N, NA, stage:NA, dead, 180 days
258.7
AK003
N, NA, stage:NA, dead, 600 days
258.4
AK085
N, NA, stage:NA, alive, 660 days
256.2
AK134
N, NA, stage:NA, dead, 360 days
252.5
AK188
N, NA, stage:NA, alive, 420 days
251.8
AK076
N, NA, stage:NA, alive, 660 days
250.5
AK099
N, NA, stage:NA, dead, 420 days
248.1
AK178
N, NA, stage:NA, dead, 240 days
245.6
AK006
N, NA, stage:NA, dead, 360 days
234.5
AK015
N, NA, stage:NA, alive, 720 days
234.3
AK218
N, NA, stage:NA, dead, 180 days
233.7
AK088
N, NA, stage:NA, dead, 360 days
230.4
AK139
N, NA, stage:NA, dead, 270 days
230.0
AK041
N, NA, stage:NA, alive, 810 days
225.8
AK103
N, NA, stage:NA, alive, 1320 days
225.6
AK226
N, NA, stage:NA, dead, 360 days
224.2
AK167
N, NA, stage:NA, dead, 180 days
214.1
AK030
N, NA, stage:NA, dead, 120 days
207.2
AK205
N, NA, stage:NA, dead, 120 days
186.6
AK091
N, NA, stage:NA, dead, 210 days
183.3
AK102
N, NA, stage:NA, alive, 1740 days
177.2
AK005
N, NA, stage:NA, dead, 240 days
141.1
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GLIOBLASTOMA MULTIFORME - Protein relative expression (CPTAC)
Number of samples
110
Samples
Sample ID
Sample type
nRPX
CPT0217000004
Tumor
1.2
CPT0206230003
Tumor
0.9
CPT0189460003
Tumor
0.8
CPT0206110003
Tumor
0.7
CPT0162100003
Tumor
0.6
CPT0087730003
Tumor
0.6
CPT0205570003
Tumor
0.6
CPT0125570003
Tumor
0.6
CPT0189650004
Tumor
0.6
CPT0219080004
Tumor
0.6
CPT0162020003
Tumor
0.5
CPT0221180003
Tumor
0.5
CPT0087570003
Tumor
0.5
CPT0168380003
Tumor
0.5
CPT0078580003
Tumor
0.4
CPT0087950003
Tumor
0.4
CPT0205780003
Tumor
0.4
CPT0206560003
Tumor
0.4
CPT0206780003
Tumor
0.4
CPT0175060003
Tumor
0.3
CPT0064650003
Tumor
0.3
CPT0205450004
Tumor
0.3
CPT0206880003
Tumor
0.3
CPT0218770003
Tumor
0.3
CPT0093360003
Tumor
0.2
CPT0186100003
Tumor
0.2
CPT0228220003
Tumor
0.2
CPT0064890003
Tumor
0.2
CPT0071100003
Tumor
0.2
CPT0196850003
Tumor
0.2
CPT0167530003
Tumor
0.2
CPT0189850004
Tumor
0.1
CPT0093590003
Tumor
0.1
CPT0127420003
Tumor
0.1
CPT0204420003
Normal
0.1
CPT0189570004
Tumor
0.1
CPT0093550003
Tumor
0.1
CPT0002410011
Tumor
0.1
CPT0206450003
Tumor
0.1
CPT0217060003
Tumor
0.1
CPT0217710008
Tumor
0.1
CPT0217100003
Tumor
0.1
CPT0089150003
Tumor
0.1
CPT0216920008
Tumor
0.1
CPT0182500003
Tumor
0.1
CPT0204390003
Normal
0.0
CPT0123530003
Tumor
0.0
CPT0208980003
Tumor
0.0
CPT0092440003
Tumor
0.0
CPT0204400003
Normal
0.0
CPT0217880003
Tumor
0.0
CPT0168590003
Tumor
0.0
CPT0204410003
Normal
0.0
CPT0204350003
Normal
0.0
CPT0218690004
Tumor
0.0
CPT0182550003
Tumor
0.0
CPT0167640003
Tumor
0.0
CPT0127480003
Tumor
0.0
CPT0093510003
Tumor
-0.1
CPT0204360003
Normal
-0.1
CPT0204330003
Normal
-0.1
CPT0087680003
Tumor
-0.1
CPT0204340003
Normal
-0.1
CPT0201710003
Tumor
-0.1
CPT0199770003
Tumor
-0.1
CPT0217190003
Tumor
-0.1
CPT0218670003
Tumor
-0.1
CPT0125220003
Tumor
-0.1
CPT0225760003
Tumor
-0.1
CPT0168830003
Tumor
-0.1
CPT0190360004
Tumor
-0.1
CPT0204380003
Normal
-0.1
CPT0206000004
Tumor
-0.1
CPT0204370003
Normal
-0.1
CPT0079790003
Tumor
-0.1
CPT0205890003
Tumor
-0.1
CPT0207090003
Tumor
-0.2
CPT0167970003
Tumor
-0.2
CPT0104220003
Tumor
-0.2
CPT0125510003
Tumor
-0.2
CPT0104330003
Tumor
-0.2
CPT0189750004
Tumor
-0.2
CPT0218890004
Tumor
-0.2
CPT0189250003
Tumor
-0.2
CPT0093450003
Tumor
-0.2
CPT0224390004
Tumor
-0.2
CPT0205670004
Tumor
-0.2
CPT0224540004
Tumor
-0.2
CPT0161730003
Tumor
-0.2
CPT0224600003
Tumor
-0.2
CPT0162140003
Tumor
-0.2
CPT0190240004
Tumor
-0.2
CPT0217430008
Tumor
-0.3
CPT0168480003
Tumor
-0.3
CPT0206330003
Tumor
-0.3
CPT0206670004
Tumor
-0.3
CPT0168270003
Tumor
-0.3
CPT0218830004
Tumor
-0.3
CPT0225730003
Tumor
-0.3
CPT0224330003
Tumor
-0.3
CPT0168080003
Tumor
-0.3
CPT0218330004
Tumor
-0.3
CPT0209440003
Tumor
-0.3
CPT0168720003
Tumor
-0.4
CPT0182580003
Tumor
-0.4
CPT0207030003
Tumor
-0.4
CPT0167860004
Tumor
-0.5
CPT0167750004
Tumor
-0.5
CPT0218960004
Tumor
-0.5
CPT0171580008
Tumor
-0.6
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GLIOMA - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.