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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:654.0 nTPM
GTEx:654.0 nTPM
FANTOM5:237.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042570Antibody CAB037166Antibody CAB037187Antibody CAB037221
Squamous epithelial cells HighHighHighHigh









VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

654.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 654.0
Samples: 156

Max nTPM: 2273.6
Min nTPM: 252.5
Std nTPM: 238.9
Median nTPM: 604.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 2273.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1984.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1443.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1131.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1078.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1038.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1036.7
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1013.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1009.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1005.4
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 888.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 882.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 870.9
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 851.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 846.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 844.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 843.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 840.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 838.4
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 828.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 819.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 799.1
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 797.9
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 789.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 775.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 774.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 770.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 769.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 765.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 764.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 762.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 759.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 748.4
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 747.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 745.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 743.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 739.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 731.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 730.4
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 727.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 726.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 725.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 716.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 714.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 711.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 710.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 709.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 707.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 706.2
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 702.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 701.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 693.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 693.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 689.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 689.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 683.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 669.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 668.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 666.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 654.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 654.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 653.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 653.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 652.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 652.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 643.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 638.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 637.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 629.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 627.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 623.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 622.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 619.9
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 617.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 615.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 610.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 607.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 606.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 602.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 601.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 600.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 599.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 599.5
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 598.6
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 598.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 596.9
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 595.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 594.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 591.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 590.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 589.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 589.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 586.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 580.8
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 580.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 579.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 578.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 574.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 572.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 571.2
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 570.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 566.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 565.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 565.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 564.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 564.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 563.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 563.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 559.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 556.2
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 554.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 554.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 550.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 546.5
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 546.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 544.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 541.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 539.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 528.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 525.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 519.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 517.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 516.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 516.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 515.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 513.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 512.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 508.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 503.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 492.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 491.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 490.3
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 487.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 485.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 475.7
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 471.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 463.7
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 457.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 451.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 447.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 446.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 446.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 422.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 422.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 405.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 402.3
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 400.3
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 398.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 386.6
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 372.4
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 355.7
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 354.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 345.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 336.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 290.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 252.5
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

237.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 237.2
FF:10204-103F6 68 years, female 237.2

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