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SNAP25
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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

26.770
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:410.5 nTPM
HPA Brain:643.7 nTPM
GTEx:410.5 nTPM
Pig:392.5 nTPM
Mouse:1056.7 nTPM
Allen mouse:23.8 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA001830
Hypothalamus mean intensity 26.770
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 26.770
Periventricular hypothalamic nucleus 1.223
Supraoptic nucleus 2.614
Tuberal nucleus 10.335
Ventral tuberomammillary nucleus -
Lateral preoptic area 5.299
Medial preoptic area 4.555
Suprachiasmatic nucleus 0.819
Paraventricular hypothalamic nucleus 9.807
Anterior hypothalamic area, central 2.215
Ventral medial hypothalamic nucleus 1.769
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 10.492
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 9.202
Dorsal medial hypothalamic nucleus 2.611
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

643.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 599.3
2226 Male, age 75, left hemisphere 1045.5
1961 Female, age 42, unknown 153.0
Dorsomedial nucleus
nTPM: 277.3
1989 Male, age 62, unknown 470.4
2017 Female, age 42, unknown 199.8
2041 Female, age 72, unknown 161.7
Lateral hypothalamic area
nTPM: 643.7
2228 Male, age 66, unknown 1419.4
2271 Male, age 75, both hemispheres 477.6
1791 Male, age 80, right hemisphere 411.9
2412 Male, age 62, unknown 265.9
Mammillary body
nTPM: 519.9
1923 Female, age 72, unknown 1030.2
2413 Male, age 66, unknown 511.7
1834 Female, age 42, unknown 395.2
1948 Female, age 72, unknown 380.5
1945 Male, age 80, right hemisphere 282.0
Paraventricular nucleus
nTPM: 213.2
2700 Male, age 62, unknown 213.2
Preoptic area
nTPM: 271.5
1907 Male, age 80, right hemisphere 340.2
1861 Female, age 42, unknown 250.2
2414 Female, age 72, unknown 224.1
Supraoptic nucleus
nTPM: 204.0
2835 Female, age 72, unknown 289.7
1894 Female, age 72, unknown 210.2
2043 Male, age 62, unknown 112.0
Ventromedial nucleus
nTPM: 157.4
1982 Female, age 72, unknown 172.7
1822 Female, age 42, unknown 142.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

410.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 410.5
Samples: 202

Max nTPM: 2838.1
Min nTPM: 12.4
Std nTPM: 343.6
Median nTPM: 336.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 2838.1
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 2127.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1942.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1708.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1591.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1427.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1355.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1327.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1067.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 794.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 783.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 777.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 766.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 754.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 742.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 727.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 708.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 705.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 680.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 645.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 640.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 633.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 631.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 620.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 599.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 597.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 596.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 596.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 595.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 580.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 578.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 578.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 577.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 577.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 540.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 539.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 538.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 536.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 516.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 515.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 512.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 510.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 508.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 505.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 503.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 499.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 498.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 496.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 486.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 480.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 479.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 478.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 477.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 470.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 465.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 464.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 457.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 455.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 453.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 449.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 448.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 445.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 443.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 438.0
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 433.7
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 432.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 431.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 428.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 427.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 426.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 426.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 420.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 417.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 414.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 413.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 412.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 407.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 405.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 397.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 396.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 396.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 391.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 383.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 383.7
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 380.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 379.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 377.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 377.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 375.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 369.8
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 369.2
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 363.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 362.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 361.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 353.9
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 351.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 346.4
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 342.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 341.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 339.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 337.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 335.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 333.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 333.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 329.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 328.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 326.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 325.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 325.0
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 324.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 323.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 319.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 318.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 315.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 312.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 312.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 308.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 303.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 301.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 295.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 295.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 293.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 293.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 288.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 287.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 285.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 282.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 282.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 279.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 277.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 276.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 276.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 274.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 274.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 273.8
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 272.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 262.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 261.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 260.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 257.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 252.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 252.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 248.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 247.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 247.6
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 244.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 239.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 238.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 237.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 236.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 235.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 235.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 231.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 228.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 228.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 225.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 223.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 222.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 222.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 220.6
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 220.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 216.7
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 211.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 210.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 205.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 201.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 200.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 196.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 194.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 189.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 189.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 188.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 188.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 186.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 182.6
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 174.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 168.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 166.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 161.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 154.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 152.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 149.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 140.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 138.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 128.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 126.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 122.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 120.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 81.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 81.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 78.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 75.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 73.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 72.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 69.9
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 62.6
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 59.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 53.5
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 44.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 35.7
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 29.7
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 12.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

392.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 392.5
Samples: 4

Max nTPM: 505.3
Min nTPM: 304.3
Sample A Female 505.3
Sample B Female 433.1
Sample C Male 327.3
Sample D Male 304.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1056.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1056.7
Samples: 4

Max nTPM: 1103.0
Min nTPM: 1001.2
Sample A Male 1089.3
Sample B Male 1033.3
Sample C Female 1103.0
Sample D Female 1001.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

23.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 23.8
70919418 Antisense, RP_050713_01_C08, Mouse strain C57BL/6J (56 days, male) 23.8

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