PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:308.3 nTPM
FANTOM5:102.3 Scaled Tags Per Million
Pig:59.0 nTPM
Mouse:66.6 nTPM
Allen mouse:1.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 308.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 265.8
2090 Male, age 80, both hemispheres 288.6
2188 Female, age 91, both hemispheres 260.5
2301 Female, age 85, both hemispheres 259.3
1984 Male, age 76, both hemispheres 254.8
Area postrema
nTPM: 291.6
2799 Male, age 61, both hemispheres 333.0
2054 Male, age 76, both hemispheres 309.9
2306 Male, age 80, both hemispheres 231.8
Dorsal cochlear nucleus
nTPM: 281.7
2802 Male, age 74, right hemisphere 336.1
2378 Male, age 80, both hemispheres 286.4
2058 Male, age 76, both hemispheres 279.4
2370 Male, age 61, both hemispheres 266.3
2187 Female, age 91, both hemispheres 240.3
Dorsal medullary reticular nucleus
nTPM: 254.2
2088 Male, age 76, both hemispheres 267.9
2373 Male, age 61, both hemispheres 261.6
2040 Female, age 85, both hemispheres 233.2
Dorsal motor vagal complex
nTPM: 264.2
2797 Male, age 61, both hemispheres 319.0
2643 Male, age 74, both hemispheres 304.6
2185 Male, age 76, both hemispheres 303.6
2844 Male, age 55, unknown 248.1
2807 Female, age 85, both hemispheres 243.4
2133 Female, age 91, both hemispheres 237.7
2813 Female, age 72, unknown 231.6
2000 Male, age 74, unknown 225.6
Dorsal tegmental nucleus
nTPM: 248.5
2358 Male, age 61, both hemispheres 260.3
2326 Male, age 74, both hemispheres 253.5
1936 Male, age 76, left hemisphere 243.0
2083 Male, age 80, both hemispheres 237.3
Dorsolateral tegmental area
nTPM: 227.9
2141 Male, age 76, both hemispheres 247.0
2360 Male, age 74, both hemispheres 245.5
2654 Male, age 80, both hemispheres 234.6
2337 Male, age 61, both hemispheres 208.9
2751 Female, age 85, both hemispheres 203.4
Gigantocellular reticular nuclei, medullary
nTPM: 260.2
2387 Female, age 91, both hemispheres 289.5
2462 Male, age 74, both hemispheres 273.6
2310 Male, age 80, both hemispheres 266.9
2022 Male, age 76, right hemisphere 266.8
2314 Male, age 61, both hemispheres 238.6
1876 Female, age 85, both hemispheres 225.8
Gigantocellular reticular nuclei, pars
nTPM: 265.4
2168 Male, age 76, both hemispheres 321.7
2330 Male, age 80, both hemispheres 284.3
2706 Male, age 80, both hemispheres 275.1
2084 Female, age 85, both hemispheres 230.6
2336 Male, age 61, both hemispheres 215.5
Inferior olive
nTPM: 263.5
2628 Female, age 91, both hemispheres 280.1
2563 Male, age 74, both hemispheres 275.0
2379 Male, age 80, both hemispheres 270.2
2178 Male, age 61, both hemispheres 255.3
2085 Female, age 85, both hemispheres 237.0
Kolliker-Fuse nucleus
nTPM: 256.5
2793 Female, age 91, left hemisphere 273.8
2315 Male, age 76, right hemisphere 250.2
2163 Male, age 80, both hemispheres 245.5
Lateral lemniscal nuclei
nTPM: 295.7
2036 Male, age 80, both hemispheres 337.3
2169 Male, age 76, both hemispheres 299.4
2746 Female, age 85, left hemisphere 291.1
2320 Female, age 91, left hemisphere 285.6
2453 Male, age 74, right hemisphere 264.9
Lateral medullary reticular nucleus
nTPM: 244.5
2804 Female, age 91, both hemispheres 273.3
2044 Male, age 76, both hemispheres 267.9
2374 Male, age 61, both hemispheres 252.2
2190 Female, age 85, both hemispheres 227.9
2852 Male, age 80, both hemispheres 225.2
2305 Male, age 74, both hemispheres 220.6
Lateral parabrachial nucleus
nTPM: 276.6
2139 Female, age 85, right hemisphere 295.7
2790 Male, age 61, both hemispheres 276.4
2792 Male, age 76, both hemispheres 267.3
2013 Male, age 80, both hemispheres 267.1
Lateral vestibular nucleus
nTPM: 253.5
2184 Male, age 76, both hemispheres 269.4
2311 Male, age 80, both hemispheres 237.5
Locus coeruleus
nTPM: 247.6
2720 Male, age 74, both hemispheres 268.7
1980 Male, age 76, both hemispheres 268.1
2014 Male, age 55, unknown 255.7
2162 Male, age 80, both hemispheres 252.7
2317 Female, age 72, unknown 245.4
2788 Male, age 74, unknown 222.1
2123 Female, age 91, both hemispheres 220.4
Medial olivary nucleus
nTPM: 249.7
2138 Female, age 91, both hemispheres 280.5
2851 Male, age 80, both hemispheres 273.1
1962 Male, age 76, both hemispheres 223.4
1943 Male, age 61, both hemispheres 221.8
Medial parabrachial nucleus
nTPM: 252.3
2156 Male, age 61, both hemispheres 265.1
2786 Male, age 76, both hemispheres 257.2
2854 Male, age 80, both hemispheres 255.4
2463 Female, age 85, right hemisphere 250.9
2170 Female, age 91, both hemispheres 232.8
Medial periolivary nuclei
nTPM: 295.8
2171 Female, age 85, both hemispheres 368.5
2081 Male, age 80, both hemispheres 286.6
2063 Male, age 76, both hemispheres 284.5
2458 Female, age 91, both hemispheres 281.1
2791 Male, age 74, right hemisphere 258.4
Medial vestibular nucleus
nTPM: 247.5
2134 Male, age 76, both hemispheres 266.2
2624 Male, age 61, both hemispheres 262.2
2803 Female, age 91, both hemispheres 261.9
2743 Female, age 85, both hemispheres 240.6
2801 Male, age 74, both hemispheres 238.1
2093 Male, age 80, both hemispheres 216.0
Motor facial nucleus
nTPM: 285.8
2327 Male, age 80, both hemispheres 318.3
2697 Female, age 85, both hemispheres 310.9
2795 Female, age 91, both hemispheres 290.4
2062 Male, age 76, both hemispheres 285.4
2126 Male, age 61, both hemispheres 258.1
2365 Male, age 74, right hemisphere 251.8
Motor hypoglossal nucleus
nTPM: 235.6
2277 Male, age 76, both hemispheres 271.0
2125 Female, age 91, both hemispheres 244.3
2182 Male, age 80, both hemispheres 241.1
2461 Male, age 61, both hemispheres 220.6
2132 Female, age 85, both hemispheres 201.2
Motor trigeminal nucleus
nTPM: 268.9
2079 Male, age 80, both hemispheres 300.2
2321 Female, age 91, both hemispheres 286.1
2560 Male, age 74, both hemispheres 265.7
2335 Male, age 61, both hemispheres 246.6
2309 Male, age 76, both hemispheres 246.1
Nuclei of the trapezoid body
nTPM: 305.2
2735 Female, age 85, both hemispheres 358.2
2166 Male, age 80, both hemispheres 313.6
2159 Male, age 61, both hemispheres 299.4
2368 Female, age 91, both hemispheres 280.6
1983 Male, age 76, both hemispheres 274.3
Nucleus ambiguus
nTPM: 266.0
2096 Female, age 85, both hemispheres 301.3
2071 Male, age 76, both hemispheres 230.7
Nucleus cuneatus
nTPM: 267.9
2805 Female, age 91, both hemispheres 314.4
2131 Male, age 76, both hemispheres 289.9
2564 Male, age 74, both hemispheres 279.0
2376 Male, age 61, both hemispheres 271.2
2562 Male, age 61, both hemispheres 265.2
2380 Male, age 80, both hemispheres 265.1
2100 Male, age 76, both hemispheres 253.2
2381 Male, age 80, both hemispheres 236.7
2808 Female, age 85, both hemispheres 236.3
Nucleus gracilis
nTPM: 258.3
2299 Female, age 85, both hemispheres 260.2
2382 Male, age 80, both hemispheres 258.6
2627 Male, age 74, both hemispheres 256.0
Nucleus raphe magnus
nTPM: 297.6
2172 Female, age 85, both hemispheres 381.1
2051 Male, age 76, both hemispheres 292.9
2328 Male, age 80, both hemispheres 290.5
2160 Male, age 61, both hemispheres 285.4
2459 Female, age 91, both hemispheres 269.4
2455 Male, age 74, both hemispheres 266.3
Nucleus raphe obscurus
nTPM: 243.9
2142 Male, age 76, midline 265.4
2800 Male, age 61, midline 240.0
2845 Female, age 85, midline 226.4
Nucleus raphe pallidus
nTPM: 235.8
2145 Male, age 76, midline 262.8
2183 Male, age 80, midline 234.1
1924 Male, age 61, midline 210.6
Nucleus tractus solitarii
nTPM: 255.4
2656 Male, age 76, both hemispheres 297.2
2307 Male, age 80, both hemispheres 250.8
2144 Female, age 91, right hemisphere 249.4
2191 Female, age 85, both hemispheres 224.4
Paramedian reticular nucleus
nTPM: 236.4
2050 Female, age 85, both hemispheres 268.9
2057 Male, age 80, both hemispheres 250.3
2052 Male, age 76, both hemispheres 217.1
2313 Male, age 61, both hemispheres 209.5
Parvicellular reticular nuclei
nTPM: 256.8
2558 Male, age 74, both hemispheres 275.1
2095 Male, age 76, both hemispheres 253.4
2119 Male, age 80, both hemispheres 241.9
Parvicellular reticular nuclei, medullary
nTPM: 242.4
2189 Female, age 91, both hemispheres 254.9
2181 Male, age 80, left hemisphere 243.0
2091 Female, age 85, both hemispheres 229.4
Pedunculopontine tegmental nucleus
nTPM: 237.9
2334 Male, age 80, both hemispheres 241.3
2338 Male, age 61, both hemispheres 238.2
1921 Female, age 85, both hemispheres 234.1
Peritrigeminal nucleus
nTPM: 251.6
2136 Male, age 76, both hemispheres 260.3
2179 Male, age 61, both hemispheres 254.4
2067 Female, age 85, both hemispheres 240.0
Pontine nuclei
nTPM: 284.4
2787 Female, age 85, both hemispheres 386.3
1863 Male, age 55, unknown 294.5
1968 Male, age 76, left hemisphere 283.0
2115 Male, age 80, left hemisphere 274.5
2109 Female, age 72, unknown 268.5
2319 Female, age 91, both hemispheres 267.3
2727 Male, age 61, right hemisphere 255.0
2454 Male, age 74, left hemisphere 245.9
Pontine raphe nucleus
nTPM: 264.8
2122 Female, age 85, midline 303.0
2853 Male, age 76, midline 226.5
Posteroventral cochlear nucleus
nTPM: 242.5
2371 Male, age 61, both hemispheres 264.8
2135 Female, age 91, both hemispheres 250.9
2070 Male, age 76, both hemispheres 249.8
2752 Female, age 85, both hemispheres 246.5
2341 Male, age 80, both hemispheres 200.7
Prepositus hypoglossal nucleus
nTPM: 222.1
2086 Male, age 80, both hemispheres 229.6
2855 Female, age 85, right hemisphere 214.6
Principal sensory trigeminal nucleus
nTPM: 289.3
2158 Male, age 61, both hemispheres 309.2
2008 Male, age 80, left hemisphere 300.9
2367 Female, age 91, left hemisphere 280.0
2324 Male, age 76, both hemispheres 267.0
Reticular pontine nucleus, caudal
nTPM: 273.4
2332 Male, age 80, right hemisphere 299.3
2457 Female, age 91, both hemispheres 269.0
2559 Male, age 74, both hemispheres 267.3
2092 Male, age 76, both hemispheres 257.9
Reticular pontine nucleus, oral
nTPM: 239.6
2366 Female, age 91, both hemispheres 263.9
2012 Female, age 85, both hemispheres 262.9
2167 Male, age 76, both hemispheres 239.5
1939 Male, age 80, both hemispheres 224.5
2361 Male, age 74, both hemispheres 207.0
Reticulotegmental nucleus
nTPM: 257.2
2452 Male, age 74, both hemispheres 280.7
2333 Male, age 80, both hemispheres 252.7
2322 Female, age 91, both hemispheres 251.4
2325 Male, age 76, both hemispheres 244.1
Spinal trigeminal nucleus, caudal
nTPM: 251.3
2642 Male, age 74, both hemispheres 266.4
2390 Female, age 91, both hemispheres 259.9
2447 Male, age 76, both hemispheres 249.1
2308 Male, age 80, both hemispheres 242.1
2312 Male, age 61, both hemispheres 238.9
Spinal trigeminal nucleus, interpolar
nTPM: 241.1
2066 Male, age 76, right hemisphere 274.9
2625 Male, age 61, both hemispheres 245.9
2033 Male, age 80, both hemispheres 236.1
2389 Female, age 91, both hemispheres 234.4
2386 Female, age 85, both hemispheres 214.5
Spinal trigeminal nucleus, oral
nTPM: 237.9
2164 Male, age 80, both hemispheres 247.3
1978 Male, age 76, both hemispheres 239.2
2737 Female, age 85, both hemispheres 227.2
Spinal vestibular nucleus
nTPM: 248.0
2384 Male, age 74, both hemispheres 298.3
2748 Male, age 76, both hemispheres 253.7
2186 Female, age 91, both hemispheres 246.1
2806 Female, age 85, both hemispheres 240.9
2796 Male, age 61, both hemispheres 231.8
2780 Male, age 80, both hemispheres 217.6
Subcoeruleus area
nTPM: 260.5
2089 Male, age 76, left hemisphere 331.4
2451 Male, age 74, both hemispheres 278.1
2323 Female, age 91, left hemisphere 243.2
1958 Male, age 80, both hemispheres 235.0
2369 Female, age 85, left hemisphere 214.8
Superior olive
nTPM: 275.7
1875 Female, age 85, both hemispheres 309.9
2329 Male, age 80, right hemisphere 288.9
2561 Female, age 91, both hemispheres 276.3
2020 Male, age 76, both hemispheres 253.5
2364 Male, age 74, right hemisphere 250.0
Superior vestibular nucleus
nTPM: 238.0
2061 Male, age 76, both hemispheres 258.4
2383 Male, age 74, both hemispheres 237.3
2015 Male, age 80, both hemispheres 218.3
Ventral medullary reticular nucleus
nTPM: 272.9
2372 Male, age 61, both hemispheres 278.9
2060 Male, age 76, both hemispheres 266.9
Ventral periolivary nuclei
nTPM: 308.3
2130 Female, age 85, both hemispheres 413.9
2165 Male, age 80, both hemispheres 301.3
2794 Female, age 91, left hemisphere 273.7
2023 Male, age 76, both hemispheres 244.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 248.8
1986 Male, age 76, both hemispheres 279.1
2302 Female, age 91, both hemispheres 271.3
2741 Female, age 85, both hemispheres 239.8
2118 Male, age 80, both hemispheres 227.0
2180 Male, age 61, both hemispheres 226.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 268.7
2456 Female, age 91, both hemispheres 298.1
2161 Male, age 80, both hemispheres 290.2
1959 Male, age 76, both hemispheres 278.3
2449 Male, age 74, both hemispheres 262.3
2840 Female, age 85, both hemispheres 258.7
2359 Male, age 61, both hemispheres 224.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 102.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 102.3
FF:10182-103D2 60 years, female 117.3
FF:10165-103B3 76 years, female 87.2
Medulla oblongata
Scaled Tags Per Million: 85.6
FF:10038-101F2 18-64 years, mixed 97.7
FF:10155-103A2 76 years, female 83.0
FF:10174-103C3 60 years, female 76.1
Pons
Scaled Tags Per Million: 87.6
FF:10033-101E6 18-54 years, mixed 87.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 59.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 49.0
Samples: 4

Max nTPM: 53.7
Min nTPM: 41.1
Sample A Female 48.5
Sample B Female 52.7
Sample C Male 53.7
Sample D Male 41.1
Pons
nTPM: 59.0
Samples: 4

Max nTPM: 79.6
Min nTPM: 48.1
Sample A Female 79.6
Sample B Female 48.1
Sample C Male 50.2
Sample D Male 58.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 66.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 66.6
Samples: 4

Max nTPM: 69.0
Min nTPM: 65.0
Sample A Male 69.0
Sample B Male 65.0
Sample C Female 66.3
Sample D Female 66.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.3
68844235 Antisense, RP_050222_01_B09, Mouse strain C57BL/6J (56 days, male) 1.3
Pons
Expression energy: 1.8
68844235 Antisense, RP_050222_01_B09, Mouse strain C57BL/6J (56 days, male) 1.8

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