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  • TPT1
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

TPT1 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 5412.21
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6162.0
Number of samples 497
Samples
Sample Description pTPM
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 24195.0
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 20195.8
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 19797.2
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 17847.1
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 17806.3
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 17130.5
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 15992.6
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 15983.4
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 15828.9
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 15521.6
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 14824.1
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 14716.8
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 14232.5
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 13375.9
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 13150.4
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 12885.9
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 12607.8
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 12580.4
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 12477.2
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 12394.0
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 12191.2
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 12165.2
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 11943.1
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 11909.1
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 11766.6
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 11728.3
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 11726.7
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 11669.3
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 11567.6
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 11549.9
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 11415.0
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 11337.3
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 11305.7
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 11238.1
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 11208.6
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 11164.1
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 11079.1
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 11050.4
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 11045.0
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 11041.7
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 11005.3
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 10941.0
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 10870.2
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 10698.7
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 10695.2
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 10634.4
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 10620.3
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 10528.2
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 10453.9
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 10389.5
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 10325.4
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 10300.1
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 10275.4
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 10165.1
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 10111.2
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 9964.9
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 9956.3
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 9926.2
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 9838.2
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 9775.4
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 9614.0
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 9601.4
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 9593.3
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 9465.4
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 9441.9
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 9404.9
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 9364.6
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 9358.8
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 9318.9
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 9308.9
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 9276.5
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 9251.6
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 9184.2
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 9159.1
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 9088.2
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 9076.3
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 9052.8
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 9046.5
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 9016.4
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 8922.6
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 8795.3
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 8758.2
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 8687.4
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 8649.0
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 8627.8
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 8600.1
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 8578.0
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 8564.3
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 8512.9
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 8406.8
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 8323.9
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 8298.3
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 8260.6
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 8244.6
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 8201.7
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 8167.8
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 8089.8
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 8066.8
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 8058.8
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 7953.1
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 7893.9
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 7880.3
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 7870.6
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 7755.2
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 7735.2
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 7723.8
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 7699.6
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 7685.7
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 7663.8
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 7656.0
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 7649.8
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 7641.5
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 7621.0
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 7580.2
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 7567.8
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 7523.1
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 7511.5
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 7503.7
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 7468.4
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 7455.2
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 7450.3
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 7433.5
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 7373.9
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 7369.2
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 7339.0
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 7335.4
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 7278.9
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 7259.0
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 7257.1
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 7246.5
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 7162.9
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 7145.9
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 7092.0
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 7027.9
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 6981.5
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 6966.4
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 6945.5
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 6940.2
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 6917.0
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 6914.5
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 6904.4
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 6891.1
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 6886.7
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 6863.0
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 6848.0
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 6823.6
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 6795.5
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 6761.0
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 6725.7
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 6717.8
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 6713.7
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 6703.9
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 6645.6
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 6628.3
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 6602.3
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 6597.0
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 6585.9
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 6567.9
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 6563.7
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 6556.6
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 6532.1
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 6522.7
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 6496.6
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 6482.7
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 6470.8
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 6470.7
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 6441.8
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 6440.6
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 6425.6
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 6411.7
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 6409.4
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 6408.6
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 6398.6
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 6390.7
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 6387.7
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 6374.1
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 6351.8
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 6334.4
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 6331.8
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 6313.4
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 6296.3
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 6288.1
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 6282.0
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 6281.9
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 6272.8
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 6267.9
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 6264.8
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 6257.7
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 6248.9
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 6241.7
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 6225.1
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 6198.7
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 6197.2
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 6170.5
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 6137.3
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 6137.0
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 6135.6
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 6114.0
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 6091.8
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 6060.2
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 6054.5
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 6052.1
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 6051.4
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 6029.6
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 6008.2
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 5963.6
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 5957.0
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 5951.6
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 5945.9
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 5914.4
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 5901.1
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 5896.8
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 5884.8
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 5854.8
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 5849.5
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 5780.8
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 5779.7
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 5766.7
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 5761.9
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 5745.0
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 5734.1
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 5720.8
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 5704.2
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 5704.2
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 5690.9
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 5685.4
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 5664.7
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 5659.8
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 5641.0
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 5628.6
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 5616.7
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 5609.7
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 5594.4
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 5568.3
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 5565.4
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 5564.9
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 5560.5
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 5550.3
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 5549.3
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 5524.3
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 5520.8
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 5507.0
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 5496.5
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 5489.2
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 5487.3
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 5470.5
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 5457.4
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 5449.0
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 5448.3
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 5446.9
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 5446.7
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 5444.7
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 5440.3
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 5437.5
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 5421.9
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 5412.4
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 5412.0
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 5384.6
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 5377.4
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 5375.7
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 5371.2
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 5321.0
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 5319.2
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 5305.4
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 5301.6
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 5286.1
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 5262.3
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 5245.6
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 5231.9
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 5231.7
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 5230.3
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 5222.6
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 5221.6
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 5210.4
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 5194.8
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 5188.3
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 5187.1
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 5179.6
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 5177.9
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 5165.8
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 5156.0
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 5151.3
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 5148.5
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 5105.0
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 5090.1
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 5083.7
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 5083.4
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 5073.3
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 5069.3
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 5054.7
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 5050.2
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 5038.8
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 5031.4
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 5028.7
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 5026.2
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 5026.2
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 4965.5
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 4962.5
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 4959.4
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 4948.4
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 4932.5
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 4930.1
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 4883.4
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 4868.8
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 4860.6
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 4847.9
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 4846.5
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 4842.4
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 4836.8
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 4831.8
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 4828.9
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 4821.8
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 4816.2
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 4804.9
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 4798.8
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 4789.4
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 4785.4
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 4781.3
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 4764.1
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 4731.5
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 4697.4
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 4690.4
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 4685.3
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 4672.8
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 4669.0
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 4664.8
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 4595.1
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 4586.0
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 4577.1
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 4566.7
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 4550.4
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 4546.8
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 4546.0
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 4539.8
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 4537.7
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 4536.4
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 4529.6
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 4522.2
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 4517.8
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 4511.3
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 4505.4
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 4496.9
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 4466.9
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 4464.7
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 4460.0
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 4458.2
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 4445.4
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 4408.0
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 4380.9
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 4365.9
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 4363.5
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 4361.8
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 4345.5
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 4334.7
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 4334.0
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 4326.1
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 4316.9
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 4309.4
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 4275.2
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 4271.6
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 4244.2
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 4229.1
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 4225.2
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 4213.9
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 4205.1
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 4193.0
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 4192.1
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 4185.5
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 4162.7
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 4149.4
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 4105.1
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 4105.1
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 4098.5
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 4087.4
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 4073.1
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 4055.9
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 4035.0
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 3998.6
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 3993.2
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 3983.1
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 3975.8
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 3962.1
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 3954.3
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 3952.6
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 3933.3
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 3929.1
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 3902.3
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 3902.3
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 3898.4
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 3886.1
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 3870.4
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 3860.2
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 3849.6
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 3844.3
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 3814.4
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 3814.3
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 3807.4
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 3781.2
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 3764.5
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 3762.8
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 3762.1
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 3743.0
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 3721.6
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 3717.2
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 3708.0
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 3697.6
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 3696.0
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 3691.5
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 3675.0
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 3658.9
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 3642.1
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 3641.8
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 3613.6
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 3612.7
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 3596.4
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 3587.8
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 3553.3
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 3545.6
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 3517.5
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 3510.5
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 3457.5
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 3454.5
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 3445.6
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 3442.8
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 3428.8
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 3385.2
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 3371.7
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 3367.1
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 3354.5
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 3343.2
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 3341.4
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 3330.8
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 3319.6
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 3309.3
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 3301.0
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 3299.3
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 3248.3
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 3229.8
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 3216.1
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 3208.3
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 3190.2
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 3145.3
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 3142.4
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 3127.7
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 3120.7
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 3115.8
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 3111.7
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 3103.9
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 3097.1
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 3075.4
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 3073.6
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 3070.9
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 3030.2
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 3019.2
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 3005.8
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 2967.9
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 2963.9
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 2962.4
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 2951.1
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 2946.3
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 2931.5
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 2875.7
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 2848.7
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 2848.3
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 2827.7
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 2816.0
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 2738.8
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 2736.7
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 2722.3
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 2685.7
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 2665.0
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 2661.8
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 2652.8
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 2644.0
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 2628.6
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 2626.6
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 2623.7
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 2563.3
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 2553.3
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 2535.0
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 2526.1
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 2516.3
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 2451.8
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 2446.6
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 2438.4
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 2433.6
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 2317.0
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 2297.8
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 2294.2
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 2266.7
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 2261.6
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 2174.5
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 2119.8
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 2015.3
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 1982.5
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 1907.3
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 1387.7
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

TPT1 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 5344.5
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5670.3
Number of samples 105
Samples
Sample Description pTPM
L773 64 years, female, stage:Stage IV, dead, 311 days 13688.8
L791 66 years, female, stage:Stage IIIA, dead, 368 days 11900.3
L602 69 years, female, stage:Stage IA, alive, 2277 days 11663.8
L851 70 years, male, stage:Stage IB, dead, 1315 days 11520.6
L850 77 years, male, stage:Stage IIIA, dead, 997 days 11242.6
L842 62 years, female, stage:Stage IB, alive, 2005 days 10826.9
L473 66 years, female, stage:Stage IA, alive, 3021 days 10653.2
L731 59 years, female, stage:Stage IA, dead, 964 days 9245.6
L867 62 years, female, stage:Stage IIIA, dead, 317 days 8956.9
L683 77 years, female, stage:Stage IIA, dead, 612 days 8738.4
L662 66 years, male, stage:Stage IA, dead, 865 days 8024.5
L782 73 years, female, stage:Stage IIB, alive, 3371 days 7888.2
L673 74 years, female, stage:Stage IA, dead, 568 days 7874.4
L816 73 years, female, stage:Stage IIA, dead, 353 days 7813.2
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 7687.5
L605 74 years, female, stage:Stage IA, alive, 2460 days 7387.9
L561 62 years, female, stage:Stage IA, alive, 2543 days 7197.5
L865 75 years, female, stage:Stage IIB, alive, 1927 days 7183.0
L439 80 years, male, stage:Stage IIB, dead, 2773 days 7178.8
L827 70 years, male, stage:Stage IIB, dead, 1105 days 7070.1
L682 64 years, female, stage:Stage IIB, dead, 840 days 7061.1
L877 70 years, female, stage:Stage IA, alive, 1599 days 6998.9
L688 57 years, male, stage:Stage IIIA, dead, 789 days 6985.6
L875 69 years, female, stage:Stage IA, alive, 1675 days 6704.4
L871 74 years, male, stage:Stage IB, dead, 873 days 6633.6
L413 72 years, female, stage:Stage IIIA, dead, 313 days 6623.4
L656 58 years, male, stage:Stage IA, alive, 2227 days 6610.9
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 6469.4
L404 74 years, female, stage:Stage IIA, dead, 2318 days 6421.3
L829 76 years, male, stage:Stage IA, alive, 2173 days 6307.4
L601 75 years, male, stage:Stage IB, dead, 2068 days 6249.8
L565 59 years, female, stage:Stage IB, dead, 543 days 6226.0
L585 70 years, female, stage:Stage IIA, dead, 402 days 5960.6
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 5870.4
L620 70 years, female, stage:Stage IIIA, dead, 338 days 5862.9
L462 67 years, male, stage:Stage IIIA, dead, 568 days 5855.8
L400 78 years, male, stage:Stage IIA, dead, 1233 days 5752.6
L689 69 years, male, stage:Stage IA, alive, 1943 days 5643.8
L695 68 years, female, stage:Stage IB, dead, 1762 days 5629.2
L872 71 years, female, stage:Stage IA, alive, 1793 days 5557.5
L828 68 years, female, stage:Stage IIB, alive, 2222 days 5529.2
L617 68 years, male, stage:Stage IIIA, dead, 238 days 5519.2
L778 65 years, female, stage:Stage IA, alive, 1600 days 5435.9
L638 65 years, male, stage:Stage IA, alive, 2076 days 5435.6
L532 69 years, female, stage:Stage IA, dead, 301 days 5424.1
L603 70 years, female, stage:Stage IB, dead, 972 days 5414.2
L616 54 years, male, stage:Stage IA, dead, 410 days 5405.1
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 5365.0
L826 45 years, female, stage:Stage IV, dead, 935 days 5344.5
L766 59 years, male, stage:Stage IB, alive, 1793 days 5336.0
L557 81 years, female, stage:Stage IB, alive, 2580 days 5325.5
L551 62 years, male, stage:Stage IA, alive, 2924 days 5314.7
L885 62 years, female, stage:Stage IA, alive, 1618 days 5294.7
L493 56 years, female, stage:Stage IIB, alive, 2945 days 5223.0
L746 64 years, female, stage:Stage IIIA, dead, 594 days 5197.0
L887 77 years, male, stage:Stage IA, dead, 374 days 5186.6
L546 57 years, male, stage:Stage IA, dead, 973 days 5140.9
L832 65 years, female, stage:Stage IA, alive, 2145 days 5102.2
L738 74 years, female, stage:Stage IB, dead, 1314 days 5092.7
L630 65 years, female, stage:Stage IA, dead, 1733 days 5004.5
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 4968.1
L569 76 years, female, stage:Stage IA, alive, 2531 days 4929.5
L890 56 years, female, stage:Stage IIB, dead, 1264 days 4907.9
L545 60 years, female, stage:Stage IA, alive, 2874 days 4862.4
L808 48 years, female, stage:Stage IA, alive, 3001 days 4790.4
L800 66 years, female, stage:Stage IA, dead, 2417 days 4757.4
L566 58 years, male, stage:Stage IB, alive, 2489 days 4753.9
L873 62 years, female, stage:Stage IA, alive, 1740 days 4719.2
L440 80 years, male, stage:Stage IIB, dead, 651 days 4683.7
L810 64 years, female, stage:Stage IIIA, dead, 625 days 4666.8
L530 76 years, female, stage:Stage IIA, dead, 308 days 4656.5
L663 62 years, female, stage:Stage IB, alive, 2018 days 4616.7
L678 65 years, female, stage:Stage IB, dead, 1114 days 4582.3
L710 72 years, female, stage:Stage IIA, alive, 1775 days 4541.2
L703 71 years, male, stage:Stage IIA, dead, 1137 days 4473.3
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 4359.3
L593 78 years, male, stage:Stage IA, dead, 2436 days 4346.8
L838 71 years, female, stage:Stage IA, dead, 1005 days 4305.3
L458 76 years, female, stage:Stage IA, dead, 223 days 4279.3
L879 75 years, male, stage:Stage IV, dead, 873 days 4271.1
L735 75 years, female, stage:Stage IA, alive, 1830 days 4103.8
L543 65 years, male, stage:Stage IA, alive, 2711 days 4081.9
L613 72 years, male, stage:Stage IIIA, dead, 19 days 4064.8
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 4026.4
L606 55 years, male, stage:Stage IA, alive, 2336 days 3937.3
L880 75 years, female, stage:Stage IA, alive, 1767 days 3914.6
L802 62 years, female, stage:Stage IA, dead, 773 days 3859.3
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 3845.0
L504 65 years, female, stage:Stage IA, dead, 1295 days 3822.2
L749 49 years, female, stage:Stage IIIA, dead, 189 days 3761.4
L599 80 years, male, stage:Stage IB, dead, 2083 days 3736.2
L607 59 years, male, stage:Stage IB, alive, 2572 days 3709.6
L531 74 years, male, stage:Stage IB, dead, 928 days 3704.8
L455 52 years, female, stage:Stage IA, alive, 3315 days 3661.3
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 3577.5
L541 70 years, female, stage:Stage IIIA, dead, 915 days 3543.7
L484 64 years, female, stage:Stage IA, alive, 2895 days 3339.9
L768 60 years, male, stage:Stage IIIA, dead, 472 days 3229.3
L626 76 years, female, stage:Stage IA, dead, 1994 days 3194.3
L725 64 years, female, stage:Stage IA, alive, 1830 days 3182.0
L446 71 years, female, stage:Stage IIB, dead, 415 days 3107.0
L728 77 years, male, stage:Stage IIB, dead, 1128 days 2807.6
L831 62 years, female, stage:Stage IB, alive, 2152 days 2632.7
L596 74 years, female, stage:Stage IA, alive, 2319 days 2571.8
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 2240.3
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

TPT1 is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3160.64
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4492.1
Number of samples 489
Samples
Sample Description pTPM
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 20660.6
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 15864.8
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 15226.2
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 12953.8
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 12606.6
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 11902.4
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 11225.2
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 10443.1
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 10425.8
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 10370.5
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 10131.2
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 10046.7
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 9546.1
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 9543.6
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 9339.9
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 9278.1
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 9241.7
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 9235.0
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 9026.7
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 8657.3
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 8562.5
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 8511.5
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 8387.0
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 8358.8
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 8274.8
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 8258.1
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 8145.8
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 8091.9
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 8078.5
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 7976.3
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 7828.9
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 7746.3
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 7727.8
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 7694.4
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 7650.1
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 7631.7
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 7585.0
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 7574.3
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 7514.4
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 7482.3
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 7446.9
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 7338.0
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 7318.3
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 7292.7
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 7270.6
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 7261.8
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 7213.4
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 7211.5
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 7168.0
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 7066.1
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 7058.2
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 7039.4
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 6874.3
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 6766.8
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 6737.8
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 6720.8
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 6657.1
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 6631.0
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 6580.2
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 6564.8
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 6558.1
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 6536.3
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 6458.2
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 6448.4
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 6438.0
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 6389.0
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 6388.1
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 6379.6
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 6379.4
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 6352.8
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 6310.0
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 6301.6
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 6281.9
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 6281.5
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 6277.3
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 6220.8
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 6172.9
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 6162.4
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 6039.7
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 6011.1
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 5925.3
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 5899.8
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 5862.8
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 5837.9
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 5822.1
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 5816.7
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 5795.9
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 5783.8
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 5733.2
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 5733.0
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 5730.3
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 5693.4
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 5681.1
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 5670.3
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 5651.1
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 5639.5
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 5637.5
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 5620.0
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 5611.5
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 5580.2
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 5533.7
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 5526.1
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 5519.9
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 5507.5
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 5482.7
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 5474.4
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 5456.7
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 5456.4
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 5426.1
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 5414.2
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 5387.3
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 5362.9
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 5360.4
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 5343.8
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 5312.6
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 5308.4
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 5303.9
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 5292.5
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 5266.0
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 5260.1
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 5257.4
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 5230.0
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 5214.9
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 5213.1
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 5202.6
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 5194.6
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 5174.3
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 5171.4
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 5151.1
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 5140.9
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 5132.0
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 5130.0
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 5115.7
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 5110.3
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 5107.7
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 5093.6
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 5086.5
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 5078.8
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 5058.8
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 5054.3
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 5008.6
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 5000.1
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 4999.8
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 4995.2
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 4984.6
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 4983.8
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 4973.0
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 4947.8
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 4920.8
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 4919.3
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 4915.8
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 4905.9
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 4903.2
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 4900.7
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 4858.7
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 4857.3
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 4854.5
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 4849.8
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 4833.3
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 4827.3
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 4807.6
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 4790.0
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 4779.2
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 4778.7
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 4776.3
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 4759.4
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 4744.1
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 4703.7
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 4701.0
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 4675.0
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 4673.9
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 4664.8
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 4663.2
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 4654.0
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 4652.1
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 4634.6
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 4633.1
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 4629.0
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 4616.5
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 4614.4
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 4611.8
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 4606.3
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 4591.4
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 4587.7
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 4580.9
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 4578.4
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 4565.9
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 4537.6
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 4524.9
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 4523.0
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 4516.2
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 4510.3
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 4509.3
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 4476.1
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 4473.2
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 4470.6
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 4464.0
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 4460.6
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 4458.5
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 4443.5
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 4415.4
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 4414.6
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 4402.3
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 4396.0
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 4386.5
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 4364.4
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 4357.4
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 4342.8
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 4341.8
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 4333.7
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 4316.5
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 4315.9
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 4314.7
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 4296.1
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 4290.3
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 4281.7
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 4279.5
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 4275.7
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 4262.2
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 4244.5
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 4244.3
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 4241.1
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 4186.4
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 4180.4
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 4170.2
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 4148.1
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 4137.0
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 4136.7
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 4132.3
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 4125.0
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 4108.7
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 4104.3
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 4098.4
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 4089.1
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 4056.7
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 4048.4
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 4045.9
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 4022.6
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 4020.0
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 4013.8
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 4003.3
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 3997.3
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 3985.3
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 3977.8
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 3964.6
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 3964.3
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 3963.3
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 3960.8
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 3936.0
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 3932.5
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 3926.6
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 3906.0
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 3897.0
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 3896.0
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 3875.7
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 3872.2
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 3863.4
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 3860.0
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 3833.4
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 3829.6
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 3817.9
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 3802.4
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 3801.6
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 3789.7
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 3785.7
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 3777.8
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 3769.2
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 3754.2
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 3751.3
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 3749.7
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 3749.0
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 3738.5
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 3733.3
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 3732.8
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 3719.2
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 3718.0
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 3706.9
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 3704.3
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 3695.1
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 3680.5
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 3669.7
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 3665.5
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 3664.1
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 3645.5
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 3642.4
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 3639.5
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 3634.4
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 3614.8
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 3609.0
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 3606.0
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 3585.1
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 3572.9
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 3566.2
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 3551.5
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 3551.3
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 3545.8
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 3541.7
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 3539.4
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 3537.9
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 3532.8
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 3531.5
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 3518.7
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 3516.9
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 3512.3
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 3508.2
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 3506.7
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 3502.3
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 3502.2
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 3501.3
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 3497.6
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 3482.3
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 3476.3
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 3460.5
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 3460.3
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 3453.5
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 3450.6
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 3450.4
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 3441.3
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 3438.3
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 3431.7
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 3431.5
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 3426.8
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 3417.6
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 3416.2
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 3415.6
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 3415.1
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 3408.4
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 3398.2
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 3386.6
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 3371.8
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 3369.1
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 3356.6
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 3356.2
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 3350.2
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 3347.3
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 3341.1
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 3326.4
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 3323.4
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 3320.0
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 3311.5
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 3300.6
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 3286.5
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 3285.5
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 3284.9
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 3266.3
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 3261.8
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 3260.8
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 3259.8
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 3257.3
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 3255.9
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 3248.8
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 3247.4
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 3240.4
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 3223.9
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 3214.1
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 3200.1
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 3197.8
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 3195.5
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 3191.7
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 3184.0
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 3166.9
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 3162.0
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 3160.9
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 3160.6
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 3154.9
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 3148.7
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 3145.9
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 3142.4
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 3139.4
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 3129.8
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 3127.3
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 3121.7
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 3102.6
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 3081.7
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 3081.6
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 3072.5
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 3062.8
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 3051.3
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 3048.1
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 3047.6
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 3045.8
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 3027.3
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 3025.8
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 3024.1
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 3021.2
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 3017.4
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 3007.1
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 2996.7
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 2996.5
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 2990.7
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 2990.0
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 2988.4
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 2983.7
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 2971.5
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 2962.0
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 2959.0
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 2953.5
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 2951.7
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 2943.0
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 2941.1
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 2939.0
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 2919.9
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 2919.1
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 2916.6
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 2916.5
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 2912.5
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 2912.2
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 2905.3
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 2895.1
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 2883.2
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 2869.8
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 2862.5
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 2859.5
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 2848.5
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 2825.8
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 2825.6
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 2821.0
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 2819.2
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 2811.4
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 2785.6
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 2756.2
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 2747.3
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 2746.0
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 2733.4
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 2712.2
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 2709.4
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 2706.1
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 2687.2
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 2678.5
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 2664.9
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 2663.3
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 2639.1
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 2630.3
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 2621.8
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 2613.7
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 2596.3
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 2593.6
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 2584.6
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 2573.6
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 2555.7
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 2555.1
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 2545.5
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 2530.5
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 2523.2
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 2516.1
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 2507.3
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 2504.9
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 2504.9
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 2504.6
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 2487.7
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 2463.8
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 2459.0
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 2433.4
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 2431.2
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 2397.9
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 2376.0
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 2361.3
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 2287.5
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 2269.9
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 2264.8
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 2264.1
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 2263.6
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 2261.1
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 2259.8
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 2233.8
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 2231.0
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 2222.9
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 2219.4
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 2205.5
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 2198.6
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 2135.0
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 2122.9
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 2101.4
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 2100.3
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 2094.1
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 2092.1
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 2078.7
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 2050.1
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 2014.9
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 2014.8
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 1946.5
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 1916.7
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 1896.0
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 1889.2
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 1835.3
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 1737.3
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 1621.5
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 1500.7
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 1254.2
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

TPT1 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4209.21
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4098.2
Number of samples 68
Samples
Sample Description pTPM
L650 69 years, female, stage:Stage IB, dead, 986 days 7621.4
L468 53 years, male, stage:Stage IB, alive, 3004 days 6939.5
L736 67 years, male, stage:Stage IA, dead, 1195 days 6587.1
L447 67 years, male, stage:Stage IIB, alive, 3203 days 6567.2
L852 64 years, male, stage:Stage IB, dead, 700 days 6147.7
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 5494.0
L723 67 years, male, stage:Stage IIA, dead, 433 days 5484.6
L483 65 years, male, stage:Stage IB, dead, 77 days 5433.0
L459 75 years, male, stage:Stage IIA, alive, 3181 days 5302.8
L472 71 years, male, stage:Stage IB, dead, 423 days 5180.2
L563 61 years, female, stage:Stage IIB, dead, 1216 days 4831.2
L420 57 years, female, stage:Stage IIB, dead, 295 days 4765.3
L608 73 years, male, stage:Stage IA, alive, 2350 days 4698.3
L864 66 years, female, stage:Stage IA, alive, 2192 days 4698.2
L442 75 years, female, stage:Stage IB, dead, 2433 days 4683.4
L539 78 years, male, stage:Stage IB, dead, 370 days 4667.4
L633 77 years, female, stage:Stage IA, alive, 2102 days 4625.2
L857 69 years, male, stage:Stage IB, dead, 226 days 4576.8
L592 61 years, male, stage:Stage IB, alive, 2368 days 4573.6
L715 69 years, female, stage:Stage IIIA, dead, 150 days 4547.5
L464 66 years, male, stage:Stage IB, dead, 1935 days 4503.3
L886 71 years, male, stage:Stage IB, dead, 1932 days 4476.0
L854 62 years, female, stage:Stage IB, alive, 2256 days 4376.6
L652 82 years, male, stage:Stage IA, dead, 5 days 4337.3
L881 70 years, male, stage:Stage IB, alive, 1752 days 4274.7
L604 67 years, male, stage:Stage IIA, dead, 286 days 4260.3
L824 70 years, male, stage:Stage IA, dead, 665 days 4244.0
L644 67 years, male, stage:Stage IA, dead, 282 days 4238.3
L856 69 years, male, stage:Stage IA, dead, 1465 days 4209.2
L534 66 years, male, stage:Stage IIA, alive, 2693 days 4146.5
L444 74 years, female, stage:Stage IIB, alive, 3337 days 4050.5
L760 80 years, male, stage:Stage IIA, alive, 1895 days 4037.6
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 3907.4
L568 77 years, female, stage:Stage IIB, dead, 71 days 3895.5
L758 84 years, male, stage:Stage IA, dead, 1562 days 3870.5
L488 61 years, female, stage:Stage IIA, alive, 2993 days 3819.3
L559 72 years, male, stage:Stage IIB, alive, 2615 days 3765.6
L755 82 years, male, stage:Stage IIA, dead, 227 days 3764.1
L406 64 years, male, stage:Stage IA, alive, 3057 days 3746.8
L753 61 years, male, stage:Stage IIA, alive, 1705 days 3745.0
L466 65 years, female, stage:Stage IIIA, dead, 412 days 3730.8
L767 67 years, male, stage:Stage IA, alive, 1718 days 3722.6
L712 61 years, male, stage:Stage IA, alive, 1698 days 3716.7
L820 73 years, female, stage:Stage IA, alive, 2405 days 3688.9
L456 48 years, male, stage:Stage IIA, dead, 1660 days 3651.3
L470 78 years, female, stage:Stage IB, dead, 1774 days 3647.5
L655 62 years, male, stage:Stage IIA, dead, 1603 days 3639.1
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 3614.9
L744 75 years, male, stage:Stage IA, alive, 1614 days 3580.8
L739 49 years, female, stage:Stage IIIA, dead, 352 days 3553.1
L490 58 years, male, stage:Stage IA, dead, 716 days 3508.8
L529 79 years, female, stage:Stage IA, alive, 2775 days 3434.4
L788 54 years, female, stage:Stage IA, alive, 3385 days 3415.5
L685 71 years, female, stage:Stage IIB, alive, 1944 days 3391.0
L661 66 years, male, stage:Stage IA, dead, 1123 days 3381.0
L860 77 years, male, stage:Stage IA, alive, 2056 days 3185.8
L642 67 years, male, stage:Stage IB, dead, 1167 days 3166.2
L818 67 years, male, stage:Stage IB, alive, 2480 days 3130.3
L719 63 years, male, stage:Stage IB, alive, 1615 days 2903.8
L496 77 years, male, stage:Stage IB, alive, 2761 days 2829.2
L884 71 years, male, stage:Stage IIA, alive, 1627 days 2826.5
L457 46 years, female, stage:Stage IIA, alive, 2901 days 2810.1
L658 65 years, female, stage:Stage IIB, alive, 2083 days 2718.4
L586 67 years, male, stage:Stage IIA, dead, 784 days 2674.2
L572 58 years, male, stage:Stage IA, alive, 2532 days 2613.2
L858 69 years, female, stage:Stage IIB, dead, 558 days 2514.7
L747 74 years, female, stage:Stage IA, dead, 1112 days 2462.7
L756 72 years, male, stage:Stage IB, alive, 1796 days 2080.0
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0011710004 Tumor 0.9
CPT0105270003 Tumor 0.8
CPT0084140003 Tumor 0.6
CPT0090170004 Tumor 0.5
CPT0118620003 Tumor 0.5
CPT0090700003 Tumor 0.5
CPT0147080004 Tumor 0.5
CPT0109740004 Tumor 0.5
CPT0063810003 Tumor 0.5
CPT0113210003 Tumor 0.5
CPT0083780003 Tumor 0.4
CPT0001660013 Tumor 0.4
CPT0147380004 Tumor 0.4
CPT0091860003 Tumor 0.4
CPT0070060003 Tumor 0.4
CPT0052170004 Tumor 0.4
CPT0067070003 Tumor 0.4
CPT0115070003 Tumor 0.4
CPT0113990003 Tumor 0.4
CPT0091240003 Tumor 0.4
CPT0021450003 Tumor 0.4
CPT0067940003 Tumor 0.3
CPT0052940004 Tumor 0.3
CPT0118570003 Tumor 0.3
CPT0092240003 Tumor 0.3
CPT0014860003 Tumor 0.3
CPT0067250003 Tumor 0.3
CPT0008450003 Tumor 0.3
CPT0000920017 Tumor 0.3
CPT0098130003 Tumor 0.3
CPT0148280004 Tumor 0.3
CPT0051690004 Tumor 0.3
CPT0086750003 Tumor 0.3
CPT0146980004 Tumor 0.3
CPT0105230003 Tumor 0.3
CPT0069360003 Tumor 0.3
CPT0105060003 Tumor 0.3
CPT0082850004 Tumor 0.3
CPT0148180004 Tumor 0.3
CPT0001380003 Tumor 0.3
CPT0114840003 Tumor 0.3
CPT0023310003 Tumor 0.3
CPT0090340003 Tumor 0.3
CPT0092530003 Tumor 0.2
CPT0097580003 Tumor 0.2
CPT0118160003 Tumor 0.2
CPT0104970003 Tumor 0.2
CPT0110980004 Tumor 0.2
CPT0106110003 Tumor 0.2
CPT0118200003 Tumor 0.2
CPT0117970003 Tumor 0.2
CPT0015410003 Tumor 0.2
CPT0001960003 Tumor 0.2
CPT0112060003 Tumor 0.2
CPT0011930003 Normal 0.2
CPT0105630003 Tumor 0.2
CPT0102450003 Tumor 0.2
CPT0086310003 Tumor 0.2
CPT0105940003 Tumor 0.2
CPT0105710003 Tumor 0.1
CPT0068100003 Tumor 0.1
CPT0082740004 Tumor 0.1
CPT0067450003 Tumor 0.1
CPT0146780004 Tumor 0.1
CPT0001580009 Tumor 0.1
CPT0066890003 Tumor 0.1
CPT0001800013 Tumor 0.1
CPT0001060010 Tumor 0.1
CPT0013880003 Tumor 0.1
CPT0079830003 Tumor 0.1
CPT0055100004 Tumor 0.1
CPT0001070003 Normal 0.1
CPT0105330003 Tumor 0.1
CPT0114010003 Normal 0.1
CPT0104750003 Tumor 0.1
CPT0104630003 Tumor 0.1
CPT0125810003 Tumor 0.0
CPT0068610003 Tumor 0.0
CPT0147980004 Tumor 0.0
CPT0067620003 Tumor 0.0
CPT0067290003 Normal 0.0
CPT0147480004 Tumor 0.0
CPT0086320003 Normal 0.0
CPT0109680004 Tumor 0.0
CPT0084170003 Normal 0.0
CPT0114660004 Tumor 0.0
CPT0011750003 Normal 0.0
CPT0118880003 Tumor 0.0
CPT0089340003 Tumor 0.0
CPT0014930003 Normal 0.0
CPT0008410003 Tumor 0.0
CPT0091260003 Normal 0.0
CPT0118600003 Normal 0.0
CPT0147880004 Tumor 0.0
CPT0105370004 Normal 0.0
CPT0097600003 Normal 0.0
CPT0070080003 Normal 0.0
CPT0014290003 Normal 0.0
CPT0090570004 Tumor 0.0
CPT0105600003 Tumor 0.0
CPT0113220003 Normal 0.0
CPT0053040004 Tumor 0.0
CPT0090720003 Normal -0.1
CPT0105680003 Normal -0.1
CPT0062810003 Normal -0.1
CPT0067950003 Normal -0.1
CPT0014260003 Tumor -0.1
CPT0090860003 Tumor -0.1
CPT0082890003 Normal -0.1
CPT0105510003 Tumor -0.1
CPT0104650003 Normal -0.1
CPT0092930003 Tumor -0.1
CPT0001590003 Normal -0.1
CPT0110890003 Normal -0.1
CPT0066810003 Normal -0.1
CPT0118340003 Tumor -0.1
CPT0021490003 Normal -0.1
CPT0148000003 Normal -0.1
CPT0001810003 Normal -0.1
CPT0112080003 Normal -0.1
CPT0118810003 Tumor -0.1
CPT0105740003 Normal -0.1
CPT0063840003 Normal -0.1
CPT0069720003 Normal -0.1
CPT0105550003 Normal -0.1
CPT0109850003 Normal -0.1
CPT0105190003 Normal -0.1
CPT0001390003 Normal -0.1
CPT0013630003 Normal -0.1
CPT0147500003 Normal -0.1
CPT0090200003 Normal -0.1
CPT0105980003 Normal -0.1
CPT0013910003 Normal -0.1
CPT0105250003 Normal -0.1
CPT0083810003 Normal -0.1
CPT0091870003 Normal -0.1
CPT0001970003 Normal -0.1
CPT0092250003 Normal -0.1
CPT0069520003 Tumor -0.1
CPT0147900003 Normal -0.1
CPT0147100003 Normal -0.1
CPT0110860004 Tumor -0.1
CPT0063750003 Normal -0.1
CPT0146680004 Tumor -0.1
CPT0011910004 Tumor -0.1
CPT0082770003 Normal -0.1
CPT0086770003 Normal -0.1
CPT0090900004 Normal -0.1
CPT0104760003 Normal -0.1
CPT0109700003 Normal -0.1
CPT0013600003 Tumor -0.1
CPT0109760003 Normal -0.1
CPT0068650003 Normal -0.2
CPT0068800003 Tumor -0.2
CPT0114880003 Normal -0.2
CPT0079850003 Normal -0.2
CPT0118360003 Normal -0.2
CPT0115090003 Normal -0.2
CPT0000930003 Normal -0.2
CPT0068130003 Normal -0.2
CPT0083140003 Normal -0.2
CPT0069700003 Tumor -0.2
CPT0148300003 Normal -0.2
CPT0111480003 Normal -0.2
CPT0105010004 Normal -0.2
CPT0092940003 Normal -0.2
CPT0083390004 Tumor -0.2
CPT0001690003 Normal -0.2
CPT0118010003 Normal -0.2
CPT0067470004 Normal -0.2
CPT0102480003 Normal -0.2
CPT0118650003 Normal -0.2
CPT0114690003 Normal -0.2
CPT0023320003 Normal -0.2
CPT0118180003 Normal -0.2
CPT0105610003 Normal -0.2
CPT0118890003 Normal -0.2
CPT0090370003 Normal -0.2
CPT0067770003 Normal -0.2
CPT0147400003 Normal -0.2
CPT0146800003 Normal -0.2
CPT0148100003 Normal -0.2
CPT0109710003 Normal -0.2
CPT0069550003 Normal -0.2
CPT0083420003 Normal -0.2
CPT0067110003 Normal -0.2
CPT0063730003 Tumor -0.2
CPT0015420003 Normal -0.2
CPT0111590003 Normal -0.2
CPT0069370003 Normal -0.3
CPT0146600003 Normal -0.3
CPT0118240003 Normal -0.3
CPT0146700003 Normal -0.3
CPT0147580004 Tumor -0.3
CPT0111300003 Tumor -0.3
CPT0068830003 Normal -0.3
CPT0109830004 Tumor -0.3
CPT0118830003 Normal -0.3
CPT0106100003 Normal -0.3
CPT0147600003 Normal -0.3
CPT0089360003 Normal -0.3
CPT0066780003 Tumor -0.3
CPT0083100003 Tumor -0.3
CPT0148200003 Normal -0.4
CPT0147000003 Normal -0.4
CPT0008420003 Normal -0.4
CPT0146880004 Tumor -0.4
CPT0066930003 Normal -0.4
CPT0125830003 Normal -0.4
CPT0109720004 Tumor -0.4
CPT0090600003 Normal -0.4
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0146380004 Tumor 0.8
CPT0104360003 Tumor 0.6
CPT0105420003 Tumor 0.6
CPT0245830003 Tumor 0.6
CPT0204990003 Tumor 0.6
CPT0197740003 Tumor 0.5
CPT0191860003 Tumor 0.5
CPT0079050003 Tumor 0.5
CPT0117720003 Tumor 0.5
CPT0197090003 Tumor 0.4
CPT0208770003 Tumor 0.4
CPT0130030003 Tumor 0.4
CPT0238110004 Tumor 0.4
CPT0091050003 Tumor 0.4
CPT0237060004 Tumor 0.4
CPT0126450003 Tumor 0.4
CPT0086260003 Tumor 0.4
CPT0192540004 Tumor 0.4
CPT0204600003 Tumor 0.4
CPT0112650003 Tumor 0.4
CPT0104930003 Tumor 0.4
CPT0091820003 Tumor 0.3
CPT0089880003 Tumor 0.3
CPT0237200004 Tumor 0.3
CPT0197150003 Tumor 0.3
CPT0202350004 Tumor 0.3
CPT0079100003 Tumor 0.3
CPT0130410003 Tumor 0.3
CPT0217420003 Tumor 0.3
CPT0209020004 Tumor 0.3
CPT0197480003 Tumor 0.3
CPT0234930004 Tumor 0.3
CPT0221200003 Tumor 0.3
CPT0146480004 Tumor 0.3
CPT0175260003 Tumor 0.3
CPT0187370003 Tumor 0.3
CPT0010050003 Tumor 0.3
CPT0222730003 Tumor 0.3
CPT0091610003 Tumor 0.3
CPT0233320003 Tumor 0.3
CPT0204800003 Tumor 0.3
CPT0195510003 Tumor 0.2
CPT0197210003 Tumor 0.2
CPT0175390003 Tumor 0.2
CPT0234560003 Tumor 0.2
CPT0136640003 Tumor 0.2
CPT0126390003 Tumor 0.2
CPT0001020003 Tumor 0.2
CPT0191930003 Normal 0.2
CPT0227400003 Tumor 0.2
CPT0083980003 Tumor 0.2
CPT0191710003 Tumor 0.2
CPT0090440003 Tumor 0.2
CPT0209490003 Tumor 0.2
CPT0130440004 Normal 0.2
CPT0175560003 Tumor 0.2
CPT0245780003 Tumor 0.2
CPT0007740003 Tumor 0.2
CPT0237690004 Tumor 0.2
CPT0202170003 Tumor 0.2
CPT0233600003 Tumor 0.2
CPT0126830003 Normal 0.2
CPT0102840003 Normal 0.1
CPT0207210003 Tumor 0.1
CPT0202530004 Tumor 0.1
CPT0237410004 Tumor 0.1
CPT0108560003 Tumor 0.1
CPT0202720003 Tumor 0.1
CPT0186130003 Tumor 0.1
CPT0098800003 Normal 0.1
CPT0087190003 Tumor 0.1
CPT0112580003 Tumor 0.1
CPT0225380003 Tumor 0.1
CPT0186180003 Tumor 0.1
CPT0010060003 Normal 0.1
CPT0023470003 Tumor 0.1
CPT0223790003 Tumor 0.1
CPT0023500003 Normal 0.1
CPT0245880003 Tumor 0.1
CPT0221220003 Normal 0.1
CPT0205000003 Normal 0.1
CPT0202580004 Normal 0.1
CPT0068280003 Tumor 0.1
CPT0197380003 Normal 0.1
CPT0223820003 Normal 0.1
CPT0232670003 Tumor 0.0
CPT0126810003 Tumor 0.0
CPT0175410003 Normal 0.0
CPT0126740003 Tumor 0.0
CPT0219360003 Tumor 0.0
CPT0237210003 Normal 0.0
CPT0183270003 Normal 0.0
CPT0236420003 Tumor 0.0
CPT0112720003 Tumor 0.0
CPT0202020008 Tumor 0.0
CPT0218280003 Tumor 0.0
CPT0087210003 Normal 0.0
CPT0126470003 Normal 0.0
CPT0197860003 Normal 0.0
CPT0112540003 Tumor 0.0
CPT0195520003 Normal 0.0
CPT0237760003 Tumor 0.0
CPT0063480003 Tumor 0.0
CPT0147180004 Tumor 0.0
CPT0136660003 Normal 0.0
CPT0069890003 Tumor 0.0
CPT0187380003 Normal 0.0
CPT0091620003 Normal 0.0
CPT0115860003 Normal 0.0
CPT0146400003 Normal 0.0
CPT0202400004 Normal 0.0
CPT0112600003 Normal 0.0
CPT0098770003 Tumor 0.0
CPT0111150004 Tumor 0.0
CPT0186210003 Normal 0.0
CPT0086270003 Normal 0.0
CPT0192590004 Normal 0.0
CPT0105430003 Normal 0.0
CPT0104380003 Normal 0.0
CPT0063430003 Tumor -0.1
CPT0007760003 Normal -0.1
CPT0234790003 Tumor -0.1
CPT0126760003 Normal -0.1
CPT0175270003 Normal -0.1
CPT0233120003 Tumor -0.1
CPT0225470003 Normal -0.1
CPT0130270003 Tumor -0.1
CPT0112660003 Normal -0.1
CPT0245790003 Normal -0.1
CPT0196810003 Tumor -0.1
CPT0115830003 Tumor -0.1
CPT0063440003 Normal -0.1
CPT0234580003 Normal -0.1
CPT0237710003 Normal -0.1
CPT0204820003 Normal -0.1
CPT0069900003 Normal -0.1
CPT0237570003 Normal -0.1
CPT0175120003 Tumor -0.1
CPT0237430003 Normal -0.1
CPT0245890003 Normal -0.1
CPT0202740003 Normal -0.1
CPT0222740003 Normal -0.1
CPT0123370003 Normal -0.1
CPT0117770003 Normal -0.1
CPT0197520003 Normal -0.1
CPT0197170003 Normal -0.1
CPT0237970004 Tumor -0.1
CPT0108600003 Normal -0.1
CPT0186140003 Normal -0.1
CPT0147700003 Normal -0.1
CPT0104950003 Normal -0.1
CPT0241170003 Tumor -0.1
CPT0083990003 Normal -0.1
CPT0202040003 Normal -0.1
CPT0126670003 Tumor -0.1
CPT0237550004 Tumor -0.2
CPT0234950004 Normal -0.2
CPT0130310003 Normal -0.2
CPT0190550003 Tumor -0.2
CPT0241210003 Normal -0.2
CPT0227070003 Normal -0.2
CPT0233330003 Normal -0.2
CPT0202220004 Normal -0.2
CPT0221650003 Tumor -0.2
CPT0237780003 Normal -0.2
CPT0147200003 Normal -0.2
CPT0207250003 Normal -0.2
CPT0218310003 Normal -0.2
CPT0101130003 Tumor -0.2
CPT0233160003 Normal -0.2
CPT0111000004 Normal -0.2
CPT0146500003 Normal -0.2
CPT0068320003 Normal -0.2
CPT0209040003 Normal -0.2
CPT0079110003 Normal -0.2
CPT0175160003 Normal -0.2
CPT0130070003 Normal -0.2
CPT0234820003 Normal -0.2
CPT0197100003 Normal -0.2
CPT0183250004 Tumor -0.3
CPT0147680004 Tumor -0.3
CPT0232690003 Normal -0.3
CPT0238130003 Normal -0.3
CPT0079060003 Normal -0.3
CPT0126400003 Normal -0.3
CPT0221660003 Normal -0.3
CPT0237080003 Normal -0.3
CPT0063500003 Normal -0.3
CPT0217490003 Normal -0.3
CPT0112730003 Normal -0.3
CPT0219390003 Normal -0.3
CPT0208780003 Normal -0.3
CPT0123350003 Tumor -0.3
CPT0245840003 Normal -0.3
CPT0236430003 Normal -0.3
CPT0196820003 Normal -0.3
CPT0128900003 Normal -0.3
CPT0102790003 Tumor -0.4
CPT0237990003 Normal -0.4
CPT0112550003 Normal -0.4
CPT0128890003 Tumor -0.4
CPT0204660003 Normal -0.4
CPT0091090003 Normal -0.4
CPT0191750003 Normal -0.4
CPT0001030003 Normal -0.4
CPT0227420003 Normal -0.4
CPT0233640003 Normal -0.4
CPT0064050003 Normal -0.4
CPT0209510003 Normal -0.4
CPT0064040003 Tumor -0.5
CPT0227020003 Tumor -0.6
CPT0126530003 Tumor -0.8
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA039437

Antibody HPA073929

Antibody CAB008364
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS

Contact

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