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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:75.3 nTPM
HPA Brain:52.1 nTPM
GTEx:75.3 nTPM
FANTOM5:117.1 Scaled Tags Per Million
Pig:75.9 nTPM
Mouse:51.1 nTPM
Allen mouse:0.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010029
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 48.2
2481 Female, age 94, left hemisphere 67.5
1857 Female, age 85, left hemisphere 57.0
1854 Male, age 80, left hemisphere 49.1
2288 Male, age 75, left hemisphere 48.1
2846 Female, age 79, unknown 46.8
1781 Male, age 74, unknown 40.9
2290 Female, age 72, unknown 40.8
2289 Male, age 61, right hemisphere 35.2
Globus pallidus, externus
nTPM: 51.3
1996 Male, age 80, right hemisphere 65.7
2772 Female, age 79, unknown 63.0
2395 Male, age 75, both hemispheres 54.6
2646 Male, age 61, right hemisphere 42.2
2567 Female, age 72, unknown 30.8
Globus pallidus, internus
nTPM: 52.1
2287 Male, age 75, right hemisphere 63.0
2483 Female, age 94, right hemisphere 59.0
2778 Female, age 91, both hemispheres 58.8
2037 Male, age 80, right hemisphere 57.7
1818 Male, age 74, unknown 51.8
2111 Female, age 85, right hemisphere 40.9
2566 Female, age 72, unknown 33.5
Nucleus accumbens
nTPM: 50.6
2286 Male, age 75, left hemisphere 60.4
2391 Female, age 94, left hemisphere 55.1
1856 Female, age 91, right hemisphere 53.5
1806 Female, age 85, left hemisphere 50.3
2824 Male, age 61, right hemisphere 49.6
2698 Female, age 72, unknown 49.5
1783 Male, age 74, unknown 45.8
2732 Male, age 80, right hemisphere 40.5
Nucleus basalis of Meynert
nTPM: 42.8
2393 Male, age 80, right hemisphere 44.5
2821 Male, age 75, both hemispheres 44.4
2569 Male, age 61, both hemispheres 41.3
2484 Female, age 94, left hemisphere 41.0
Nucleus of the diagonal band
nTPM: 45.1
1812 Female, age 91, both hemispheres 57.6
2775 Male, age 80, right hemisphere 46.2
1979 Male, age 74, unknown 44.2
2029 Male, age 61, right hemisphere 39.8
2195 Female, age 85, both hemispheres 37.7
Putamen
nTPM: 44.3
2482 Female, age 94, left hemisphere 58.4
1838 Male, age 80, right hemisphere 51.4
1937 Female, age 91, right hemisphere 51.3
2466 Female, age 79, unknown 46.4
1829 Male, age 74, unknown 41.1
2647 Male, age 75, left hemisphere 31.2
2489 Female, age 72, unknown 30.5
Septal nuclei
nTPM: 42.9
2031 Female, age 72, unknown 51.0
1960 Male, age 74, unknown 45.4
2199 Male, age 80, right hemisphere 43.1
2009 Female, age 91, both hemispheres 42.4
2394 Male, age 61, left hemisphere 40.0
2629 Female, age 94, right hemisphere 39.7
2059 Female, age 85, both hemispheres 38.6
Stria terminalis, bed nucleus
nTPM: 37.9
1974 Female, age 91, both hemispheres 41.0
2486 Female, age 94, both hemispheres 36.4
2201 Male, age 74, unknown 36.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 69.1
Samples: 246

Max nTPM: 145.9
Min nTPM: 43.3
Std nTPM: 12.4
Median nTPM: 67.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 145.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 119.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 115.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 109.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 103.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 102.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 96.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 95.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 95.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 91.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 91.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 90.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 90.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 89.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 88.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 88.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 87.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 86.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 86.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 84.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 84.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 84.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 84.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 84.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 83.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 83.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 83.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 83.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 83.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 82.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 81.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 81.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 81.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 81.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 80.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 80.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 80.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 79.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 78.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 78.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 78.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 78.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 77.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 77.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 77.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 76.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 76.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 76.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 76.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 76.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 76.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 75.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 75.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 75.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 75.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 75.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 75.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 74.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 74.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 74.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 74.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 74.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 74.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 73.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 73.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 73.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 73.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 73.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 72.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 72.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 72.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 72.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 72.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 72.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 72.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 72.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 72.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 72.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 72.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 71.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 71.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 71.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 71.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 70.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 70.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 70.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 70.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 70.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 70.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 70.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 70.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 70.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 70.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 70.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 70.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 70.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 70.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 69.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 69.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 69.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 69.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 69.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 69.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 69.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 69.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 69.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 69.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 69.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 69.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 68.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 68.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 68.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 68.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 68.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 68.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 68.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 67.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 67.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 67.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 67.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 67.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 67.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 67.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 67.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 67.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 66.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 66.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 66.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 66.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 66.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 66.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 66.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 66.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 66.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 66.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 66.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 66.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 66.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 65.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 65.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 65.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 65.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 65.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 65.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 65.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 65.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 64.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 64.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 64.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 64.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 64.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 64.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 63.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 63.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 63.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 63.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 63.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 63.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 63.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 63.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 63.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 63.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 63.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 62.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 62.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 62.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 62.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 62.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 62.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 62.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 62.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 61.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 61.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 61.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 61.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 61.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 61.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 61.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 61.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 61.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 61.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 60.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 60.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 60.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 60.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 60.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 60.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 60.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 60.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 60.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 60.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 60.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 60.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 60.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 59.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 59.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 59.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 59.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 59.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 59.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 59.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 59.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 58.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 58.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 58.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 57.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 57.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 57.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 57.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 56.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 56.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 56.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 56.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 56.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 55.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 55.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 55.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 54.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 54.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 54.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 54.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 53.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 53.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 53.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 53.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 53.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 52.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 52.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 52.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 52.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 52.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 51.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 50.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 50.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 48.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 46.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 43.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 73.2
Samples: 246

Max nTPM: 176.8
Min nTPM: 39.9
Std nTPM: 15.1
Median nTPM: 71.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 176.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 127.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 125.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 115.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 107.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 106.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 104.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 103.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 102.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 101.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 97.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 97.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 96.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 96.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 96.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 94.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 93.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 93.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 93.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 93.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 92.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 92.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 92.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 92.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 89.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 89.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 89.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 88.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 88.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 88.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 88.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 88.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 88.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 86.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 86.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 86.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 86.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 85.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 85.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 85.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 85.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 85.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 84.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 83.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 83.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 83.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 83.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 82.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 82.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 82.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 82.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 82.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 82.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 81.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 81.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 81.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 81.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 81.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 81.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 81.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 80.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 80.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 80.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 80.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 80.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 80.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 80.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 79.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 79.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 79.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 79.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 79.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 79.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 79.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 79.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 79.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 79.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 79.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 78.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 78.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 78.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 78.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 78.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 78.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 78.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 77.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 77.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 76.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 76.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 76.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 76.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 76.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 76.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 75.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 75.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 75.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 75.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 75.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 75.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 75.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 75.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 74.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 74.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 74.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 74.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 73.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 73.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 73.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 73.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 73.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 73.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 73.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 73.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 73.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 72.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 72.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 72.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 72.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 71.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 71.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 71.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 71.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 71.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 71.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 71.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 70.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 70.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 70.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 70.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 70.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 70.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 70.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 70.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 69.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 69.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 69.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 69.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 69.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 69.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 68.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 68.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 68.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 68.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 68.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 68.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 68.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 68.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 68.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 68.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 67.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 67.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 67.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 67.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 67.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 67.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 66.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 66.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 66.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 66.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 66.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 66.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 66.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 66.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 66.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 66.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 66.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 65.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 65.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 65.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 65.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 65.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 64.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 64.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 64.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 64.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 64.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 64.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 64.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 64.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 63.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 63.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 63.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 63.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 63.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 63.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 62.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 62.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 62.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 62.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 62.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 61.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 61.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 61.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 61.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 61.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 60.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 60.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 60.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 60.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 60.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 60.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 60.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 60.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 60.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 60.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 60.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 60.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 59.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 59.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 59.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 59.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 59.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 59.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 58.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 58.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 58.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 58.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 58.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 58.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 58.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 57.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 57.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 57.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 57.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 56.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 56.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 56.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 56.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 56.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 55.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 55.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 55.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 54.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 54.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 53.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 53.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 52.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 49.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 47.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 47.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 47.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 46.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 43.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 39.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 75.3
Samples: 205

Max nTPM: 133.8
Min nTPM: 42.1
Std nTPM: 13.4
Median nTPM: 72.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 133.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 127.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 119.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 119.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 117.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 115.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 104.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 103.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 101.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 99.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 97.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 96.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 94.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 94.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 92.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 92.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 92.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 92.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 91.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 91.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 91.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 91.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 90.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 90.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 89.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 89.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 89.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 88.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 88.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 87.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 87.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 87.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 87.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 86.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 86.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 85.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 85.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 85.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 85.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 85.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 85.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 84.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 84.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 83.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 83.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 83.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 83.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 82.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 82.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 82.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 82.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 81.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 81.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 81.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 81.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 81.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 80.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 80.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 80.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 79.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 79.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 79.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 79.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 78.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 78.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 78.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 78.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 78.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 78.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 78.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 77.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 77.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 77.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 76.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 76.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 76.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 76.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 76.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 76.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 76.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 75.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 75.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 75.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 75.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 75.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 75.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 75.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 75.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 74.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 74.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 74.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 74.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 74.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 74.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 73.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 73.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 73.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 73.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 73.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 73.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 73.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 72.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 72.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 72.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 72.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 72.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 72.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 72.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 72.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 72.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 71.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 71.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 71.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 71.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 71.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 71.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 71.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 71.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 71.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 70.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 70.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 70.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 70.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 70.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 70.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 70.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 70.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 69.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 69.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 69.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 69.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 69.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 69.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 69.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 69.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 69.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 69.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 69.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 69.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 68.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 68.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 68.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 68.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 68.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 68.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 67.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 67.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 67.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 67.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 66.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 66.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 66.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 66.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 66.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 66.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 66.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 65.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 65.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 65.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 65.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 65.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 65.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 64.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 64.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 64.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 64.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 64.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 64.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 64.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 63.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 63.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 63.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 63.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 63.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 62.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 62.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 62.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 62.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 62.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 62.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 62.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 62.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 62.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 61.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 61.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 61.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 61.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 61.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 60.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 60.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 59.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 58.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 58.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 58.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 57.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 57.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 55.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 54.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 53.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 53.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 53.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 52.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 50.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 42.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

117.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 97.0
FF:10164-103B2 76 years, female 97.0
Nucleus accumbens
Scaled Tags Per Million: 91.6
FF:10037-101F1 23-56 years, mixed 91.6
Putamen
Scaled Tags Per Million: 117.1
FF:10176-103C5 60 years, female 117.1
Globus pallidus
Scaled Tags Per Million: 103.8
FF:10175-103C4 60 years, female 121.6
FF:10161-103A8 76 years, female 86.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.9
Pig sample Sample description nTPM
Caudate
nTPM: 62.7
Samples: 4

Max nTPM: 69.6
Min nTPM: 55.0
Sample A Female 55.0
Sample B Female 62.8
Sample C Male 69.6
Sample D Male 63.3
Putamen
nTPM: 76.0
Samples: 4

Max nTPM: 105.5
Min nTPM: 61.3
Sample A Female 64.1
Sample B Female 61.3
Sample C Male 105.5
Sample D Male 72.9
Septum
nTPM: 71.1
Samples: 4

Max nTPM: 85.3
Min nTPM: 64.2
Sample A Female 64.2
Sample B Female 66.2
Sample C Male 85.3
Sample D Male 68.5
Ventral pallidum
nTPM: 63.8
Samples: 4

Max nTPM: 75.7
Min nTPM: 56.5
Sample A Female 56.5
Sample B Female 64.7
Sample C Male 75.7
Sample D Male 58.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 39.0
Samples: 4

Max nTPM: 39.5
Min nTPM: 37.8
Sample A Male 39.2
Sample B Male 37.8
Sample C Female 39.4
Sample D Female 39.5
Septum
nTPM: 51.1
Samples: 4

Max nTPM: 54.8
Min nTPM: 46.9
Sample A Male 46.9
Sample B Male 54.8
Sample C Female 50.7
Sample D Female 51.8
Ventral forebrain
nTPM: 41.1
Samples: 4

Max nTPM: 42.9
Min nTPM: 38.9
Sample A Male 38.9
Sample B Male 41.8
Sample C Female 42.9
Sample D Female 40.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.4
71493129 Antisense, RP_050913_02_C01, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.4
71493129 Antisense, RP_050913_02_C01, Mouse strain C57BL/6J (56 days, male) 0.4

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