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RPS15A
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  • RPS15A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:547.1 nTPM
FANTOM5:18.2 Scaled Tags Per Million
Pig:72.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047103
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

547.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 547.1
Samples: 246

Max nTPM: 1485.8
Min nTPM: 243.5
Std nTPM: 171.6
Median nTPM: 510.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1485.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1310.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1302.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1052.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 997.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 996.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 958.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 948.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 938.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 928.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 927.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 861.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 859.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 821.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 809.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 804.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 801.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 788.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 785.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 784.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 773.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 769.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 766.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 744.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 738.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 734.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 732.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 732.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 716.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 705.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 701.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 699.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 698.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 696.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 695.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 691.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 689.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 686.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 685.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 684.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 683.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 675.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 672.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 667.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 666.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 664.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 664.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 656.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 648.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 645.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 645.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 644.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 640.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 638.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 636.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 635.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 630.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 626.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 626.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 620.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 618.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 616.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 615.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 614.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 614.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 613.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 612.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 611.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 609.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 607.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 604.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 604.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 604.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 603.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 603.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 601.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 596.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 594.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 593.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 591.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 591.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 588.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 587.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 580.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 579.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 574.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 567.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 567.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 567.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 566.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 566.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 563.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 562.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 559.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 558.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 558.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 556.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 552.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 548.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 546.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 542.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 539.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 537.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 536.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 536.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 534.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 533.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 528.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 527.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 523.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 522.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 520.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 520.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 519.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 519.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 519.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 517.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 517.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 517.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 514.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 514.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 514.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 510.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 510.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 509.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 508.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 505.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 505.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 505.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 504.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 502.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 502.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 502.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 500.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 500.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 500.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 499.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 498.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 497.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 497.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 495.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 494.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 494.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 493.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 491.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 490.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 489.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 487.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 486.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 483.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 481.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 480.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 479.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 479.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 478.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 477.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 476.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 474.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 473.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 473.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 471.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 471.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 471.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 470.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 467.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 465.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 463.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 463.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 460.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 460.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 459.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 459.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 459.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 458.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 455.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 454.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 454.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 453.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 452.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 452.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 451.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 450.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 448.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 445.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 442.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 441.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 441.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 440.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 438.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 433.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 432.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 430.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 429.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 428.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 414.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 414.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 414.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 414.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 413.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 413.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 411.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 409.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 406.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 402.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 400.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 399.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 394.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 388.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 387.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 387.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 386.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 385.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 385.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 384.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 374.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 374.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 363.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 363.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 362.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 362.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 362.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 360.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 360.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 355.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 355.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 354.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 348.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 348.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 347.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 346.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 345.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 345.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 343.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 341.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 340.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 337.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 335.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 332.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 332.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 330.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 326.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 312.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 310.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 309.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 291.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 243.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

18.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 18.2
FF:10164-103B2 76 years, female 18.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.3
Pig sample Sample description nTPM
Caudate
nTPM: 72.4
Samples: 4

Max nTPM: 79.3
Min nTPM: 63.8
Sample A Female 79.3
Sample B Female 67.1
Sample C Male 79.2
Sample D Male 63.8

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