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RPS15A
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  • RPS15A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: Medium
Enterocytes: Medium
Enterocytes - Microvilli: Not detected
Goblet cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1585.6 nTPM
HPA:788.4 nTPM
GTEx:1585.6 nTPM
FANTOM5:157.8 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047103
Endocrine cells Medium
Enterocytes Medium
Enterocytes - Microvilli Not detected
Goblet cells Medium


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

788.4
overview
Male, age 65
Small intestine sample 232
nTPM: 960.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 773.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 729.4
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 690.8

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1585.6
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1585.6
Samples: 187

Max nTPM: 4004.0
Min nTPM: 756.4
Std nTPM: 507.0
Median nTPM: 1523.8
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 4004.0
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3315.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3295.3
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2991.6
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2845.2
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2823.3
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2817.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2729.3
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2676.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2608.7
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2455.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2422.4
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2408.3
GTEX-183FY-1626-SM-793D8 20-29 years, male 2387.3
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2376.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2347.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2309.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2292.3
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2268.7
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2257.6
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2186.5
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2172.3
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2090.0
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2085.6
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2076.6
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2053.7
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2028.6
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1978.3
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1963.8
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1944.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1934.7
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1930.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1919.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1908.7
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1908.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1899.6
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1888.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1886.8
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1880.8
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1873.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1868.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1861.3
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1842.2
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1841.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1828.4
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1821.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1814.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1789.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1789.5
GTEX-1192X-2526-SM-59868 50-59 years, male 1789.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1786.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1784.2
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1779.2
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1772.5
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1765.5
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1764.5
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1764.0
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1744.7
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1740.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1733.8
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1729.3
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1728.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1709.3
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1688.9
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1685.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1681.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1680.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1679.0
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1676.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1661.4
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1642.2
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1640.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1636.3
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1635.9
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1619.6
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1615.7
GTEX-1C475-1426-SM-793CH 40-49 years, female 1603.0
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1602.8
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1596.0
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1592.2
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1587.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1582.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1575.2
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1569.3
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1568.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1560.8
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1556.4
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1544.0
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1542.9
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1536.2
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1530.0
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1528.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1523.8
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1523.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1516.3
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1505.8
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1493.5
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1481.4
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1461.7
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1460.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1456.7
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1456.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1454.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1451.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1429.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1416.8
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1413.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1410.1
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1408.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1396.0
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1388.9
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1383.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1372.0
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1369.1
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1365.4
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1357.2
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1352.5
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1349.6
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1345.4
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1342.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1332.7
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1331.8
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1321.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1321.3
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1317.2
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1277.9
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1275.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1261.0
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1256.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1256.2
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1255.1
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1253.7
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1250.9
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1250.1
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1244.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1238.7
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1235.1
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1225.1
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1223.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1223.1
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1217.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1208.2
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1208.1
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1207.1
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1205.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1200.1
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1198.7
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1190.6
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1183.2
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1178.4
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1168.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1162.2
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1152.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1139.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1137.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1134.8
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1126.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1126.4
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1123.6
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1118.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1115.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1114.1
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1107.6
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1099.7
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1090.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1088.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1082.0
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1074.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1065.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1029.5
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1028.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 1027.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1021.3
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1020.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1016.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1004.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 999.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 985.3
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 979.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 961.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 924.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 896.3
GTEX-YFCO-1326-SM-664NV 40-49 years, male 886.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 881.3
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 866.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 844.5
GTEX-ZTSS-0926-SM-59865 40-49 years, male 756.4
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

157.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 157.8
FF:10024-101D6 15,40,85 years, mixed 157.8

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