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PPP1R1A
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  • PPP1R1A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:192.0 nTPM
FANTOM5:195.2 Scaled Tags Per Million
Pig:58.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041542Antibody CAB007811
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

192.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 192.0
Samples: 246

Max nTPM: 494.1
Min nTPM: 7.4
Std nTPM: 90.0
Median nTPM: 193.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 494.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 484.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 449.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 418.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 401.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 398.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 384.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 384.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 361.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 357.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 349.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 349.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 346.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 340.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 336.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 334.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 332.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 321.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 319.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 318.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 316.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 306.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 305.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 305.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 300.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 298.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 297.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 296.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 291.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 290.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 290.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 289.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 289.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 286.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 284.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 283.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 283.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 283.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 280.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 279.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 275.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 274.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 274.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 272.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 271.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 270.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 266.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 265.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 264.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 264.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 262.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 262.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 262.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 261.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 260.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 259.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 256.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 254.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 254.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 253.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 252.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 252.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 251.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 250.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 249.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 249.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 247.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 246.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 245.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 245.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 244.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 244.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 243.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 242.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 241.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 240.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 238.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 237.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 233.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 233.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 232.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 231.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 230.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 228.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 227.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 226.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 224.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 223.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 219.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 219.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 217.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 216.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 215.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 214.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 213.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 213.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 210.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 209.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 209.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 208.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 207.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 206.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 206.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 206.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 205.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 205.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 204.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 204.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 204.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 202.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 202.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 201.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 200.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 200.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 200.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 198.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 196.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 196.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 195.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 195.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 195.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 194.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 194.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 192.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 191.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 190.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 189.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 188.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 187.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 187.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 186.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 185.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 184.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 183.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 183.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 182.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 179.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 178.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 175.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 175.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 175.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 169.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 168.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 168.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 168.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 167.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 166.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 165.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 162.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 162.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 162.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 161.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 161.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 159.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 158.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 156.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 156.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 156.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 154.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 152.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 151.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 150.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 147.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 145.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 144.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 143.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 142.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 140.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 140.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 138.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 138.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 137.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 137.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 136.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 131.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 130.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 130.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 127.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 126.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 125.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 123.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 120.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 120.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 119.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 118.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 117.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 117.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 114.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 113.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 113.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 110.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 108.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 107.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 107.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 105.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 105.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 103.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 103.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 102.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 102.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 99.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 98.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 97.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 97.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 92.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 91.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 90.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 90.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 89.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 89.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 88.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 88.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 88.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 88.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 87.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 87.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 86.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 82.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 81.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 80.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 80.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 79.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 79.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 76.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 74.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 66.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 66.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 65.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 64.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 63.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 61.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 61.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 61.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 56.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 51.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 50.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 50.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 46.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 40.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 39.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 34.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 20.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

195.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 195.2
FF:10164-103B2 76 years, female 195.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.7
Pig sample Sample description nTPM
Caudate
nTPM: 58.7
Samples: 4

Max nTPM: 82.7
Min nTPM: 41.9
Sample A Female 41.9
Sample B Female 53.0
Sample C Male 82.7
Sample D Male 57.2

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