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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
678.6
nTPM
FANTOM5:
1288.8
Scaled Tags Per Million
Pig:
496.2
nTPM
Allen mouse:
18.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
678.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 419.4
2301
Female, age 85, both hemispheres
474.4
2188
Female, age 91, both hemispheres
432.5
1984
Male, age 76, both hemispheres
404.9
2090
Male, age 80, both hemispheres
366.0
Dorsal cochlear nucleus nTPM: 401.1
2187
Female, age 91, both hemispheres
474.4
2370
Male, age 61, both hemispheres
443.4
2058
Male, age 76, both hemispheres
433.4
2802
Male, age 74, right hemisphere
348.4
2378
Male, age 80, both hemispheres
305.9
Dorsal tegmental nucleus nTPM: 384.2
2083
Male, age 80, both hemispheres
494.3
1936
Male, age 76, left hemisphere
367.9
2358
Male, age 61, both hemispheres
354.7
2326
Male, age 74, both hemispheres
320.0
Dorsolateral tegmental area nTPM: 377.8
2141
Male, age 76, both hemispheres
455.8
2654
Male, age 80, both hemispheres
434.7
2751
Female, age 85, both hemispheres
410.4
2360
Male, age 74, both hemispheres
367.4
2337
Male, age 61, both hemispheres
220.5
Kolliker-Fuse nucleus nTPM: 459.2
2163
Male, age 80, both hemispheres
573.3
2793
Female, age 91, left hemisphere
518.6
2315
Male, age 76, right hemisphere
285.6
Lateral lemniscal nuclei nTPM: 643.6
2169
Male, age 76, both hemispheres
777.4
2036
Male, age 80, both hemispheres
701.1
2453
Male, age 74, right hemisphere
671.4
2746
Female, age 85, left hemisphere
589.4
2320
Female, age 91, left hemisphere
478.5
Lateral parabrachial nucleus nTPM: 455.3
2139
Female, age 85, right hemisphere
696.5
2013
Male, age 80, both hemispheres
427.2
2790
Male, age 61, both hemispheres
425.3
2792
Male, age 76, both hemispheres
272.2
Lateral vestibular nucleus nTPM: 490.2
2184
Male, age 76, both hemispheres
558.6
2311
Male, age 80, both hemispheres
421.8
Locus coeruleus nTPM: 516.2
2123
Female, age 91, both hemispheres
669.2
2014
Male, age 55, unknown
579.3
1980
Male, age 76, both hemispheres
511.4
2162
Male, age 80, both hemispheres
487.7
2720
Male, age 74, both hemispheres
473.1
2788
Male, age 74, unknown
453.3
2317
Female, age 72, unknown
439.2
Medial parabrachial nucleus nTPM: 465.3
2854
Male, age 80, both hemispheres
531.0
2170
Female, age 91, both hemispheres
525.4
2156
Male, age 61, both hemispheres
455.8
2786
Male, age 76, both hemispheres
442.6
2463
Female, age 85, right hemisphere
371.9
Medial periolivary nuclei nTPM: 583.4
2171
Female, age 85, both hemispheres
820.0
2063
Male, age 76, both hemispheres
713.4
2791
Male, age 74, right hemisphere
551.4
2458
Female, age 91, both hemispheres
433.6
2081
Male, age 80, both hemispheres
398.8
Motor facial nucleus nTPM: 584.2
2062
Male, age 76, both hemispheres
774.8
2365
Male, age 74, right hemisphere
646.4
2327
Male, age 80, both hemispheres
593.0
2697
Female, age 85, both hemispheres
559.3
2795
Female, age 91, both hemispheres
467.4
2126
Male, age 61, both hemispheres
464.2
Motor trigeminal nucleus nTPM: 518.1
2560
Male, age 74, both hemispheres
602.6
2079
Male, age 80, both hemispheres
595.7
2309
Male, age 76, both hemispheres
479.2
2335
Male, age 61, both hemispheres
463.4
2321
Female, age 91, both hemispheres
449.5
Nuclei of the trapezoid body nTPM: 644.1
2735
Female, age 85, both hemispheres
792.5
2159
Male, age 61, both hemispheres
738.7
1983
Male, age 76, both hemispheres
697.1
2166
Male, age 80, both hemispheres
531.8
2368
Female, age 91, both hemispheres
460.2
Nucleus raphe magnus nTPM: 678.6
2172
Female, age 85, both hemispheres
901.0
2160
Male, age 61, both hemispheres
883.8
2455
Male, age 74, both hemispheres
677.6
2328
Male, age 80, both hemispheres
559.5
2051
Male, age 76, both hemispheres
528.5
2459
Female, age 91, both hemispheres
521.3
Paramedian reticular nucleus nTPM: 467.7
2050
Female, age 85, both hemispheres
583.9
2057
Male, age 80, both hemispheres
503.3
2313
Male, age 61, both hemispheres
493.7
2052
Male, age 76, both hemispheres
290.0
Pedunculopontine tegmental nucleus nTPM: 413.0
1921
Female, age 85, both hemispheres
454.9
2334
Male, age 80, both hemispheres
451.2
2338
Male, age 61, both hemispheres
332.7
Pontine nuclei nTPM: 646.8
2787
Female, age 85, both hemispheres
967.3
2727
Male, age 61, right hemisphere
741.1
1863
Male, age 55, unknown
718.7
1968
Male, age 76, left hemisphere
704.7
2109
Female, age 72, unknown
619.3
2454
Male, age 74, left hemisphere
528.6
2115
Male, age 80, left hemisphere
462.9
2319
Female, age 91, both hemispheres
432.2
Pontine raphe nucleus nTPM: 567.0
2122
Female, age 85, midline
669.6
2853
Male, age 76, midline
464.3
Posteroventral cochlear nucleus nTPM: 395.5
2752
Female, age 85, both hemispheres
534.6
2070
Male, age 76, both hemispheres
433.3
2371
Male, age 61, both hemispheres
397.2
2135
Female, age 91, both hemispheres
335.3
2341
Male, age 80, both hemispheres
277.0
Principal sensory trigeminal nucleus nTPM: 573.8
2158
Male, age 61, both hemispheres
750.0
2008
Male, age 80, left hemisphere
594.9
2324
Male, age 76, both hemispheres
493.1
2367
Female, age 91, left hemisphere
457.1
Reticular pontine nucleus, caudal nTPM: 506.3
2332
Male, age 80, right hemisphere
611.5
2092
Male, age 76, both hemispheres
569.7
2457
Female, age 91, both hemispheres
444.2
2559
Male, age 74, both hemispheres
399.9
Reticular pontine nucleus, oral nTPM: 487.4
2361
Male, age 74, both hemispheres
595.1
2012
Female, age 85, both hemispheres
535.0
2167
Male, age 76, both hemispheres
462.2
2366
Female, age 91, both hemispheres
424.1
1939
Male, age 80, both hemispheres
420.5
Reticulotegmental nucleus nTPM: 489.3
2325
Male, age 76, both hemispheres
585.7
2452
Male, age 74, both hemispheres
468.4
2333
Male, age 80, both hemispheres
452.8
2322
Female, age 91, both hemispheres
450.2
Spinal trigeminal nucleus, oral nTPM: 474.0
2737
Female, age 85, both hemispheres
492.7
1978
Male, age 76, both hemispheres
471.4
2164
Male, age 80, both hemispheres
457.9
Subcoeruleus area nTPM: 481.3
2089
Male, age 76, left hemisphere
612.0
2323
Female, age 91, left hemisphere
540.4
1958
Male, age 80, both hemispheres
535.1
2451
Male, age 74, both hemispheres
364.0
2369
Female, age 85, left hemisphere
355.1
Superior olive nTPM: 554.1
1875
Female, age 85, both hemispheres
683.8
2364
Male, age 74, right hemisphere
544.7
2329
Male, age 80, right hemisphere
534.4
2020
Male, age 76, both hemispheres
529.8
2561
Female, age 91, both hemispheres
477.8
Ventral periolivary nuclei nTPM: 627.5
2130
Female, age 85, both hemispheres
883.4
2165
Male, age 80, both hemispheres
675.2
2794
Female, age 91, left hemisphere
481.1
2023
Male, age 76, both hemispheres
470.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 514.3
2449
Male, age 74, both hemispheres
674.0
1959
Male, age 76, both hemispheres
563.7
2840
Female, age 85, both hemispheres
540.1
2161
Male, age 80, both hemispheres
495.4
2456
Female, age 91, both hemispheres
448.9
2359
Male, age 61, both hemispheres
363.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
496.2
Pig sample
Sample description
nTPM
Pons nTPM: 496.2
Samples: 4
Max nTPM: 628.5
Min nTPM: 398.8
Sample A
Female
628.5
Sample B
Female
398.8
Sample C
Male
400.3
Sample D
Male
557.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
