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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:217.4 nTPM
HPA Brain:587.3 nTPM
GTEx:217.4 nTPM
FANTOM5:1101.9 Scaled Tags Per Million
Pig:388.8 nTPM
Mouse:189.0 nTPM
Allen mouse:19.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018790Antibody HPA048800
Glial cells MediumNot detected
Neuronal cells Not detectedMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

587.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 501.5
1781 Male, age 74, unknown 568.3
2288 Male, age 75, left hemisphere 541.9
2846 Female, age 79, unknown 536.5
2290 Female, age 72, unknown 535.4
2289 Male, age 61, right hemisphere 510.5
1857 Female, age 85, left hemisphere 455.2
1854 Male, age 80, left hemisphere 447.4
2481 Female, age 94, left hemisphere 416.9
Globus pallidus, externus
nTPM: 363.4
2772 Female, age 79, unknown 485.0
2646 Male, age 61, right hemisphere 380.8
2395 Male, age 75, both hemispheres 324.5
2567 Female, age 72, unknown 320.8
1996 Male, age 80, right hemisphere 306.0
Globus pallidus, internus
nTPM: 372.8
2287 Male, age 75, right hemisphere 499.0
1818 Male, age 74, unknown 444.9
2483 Female, age 94, right hemisphere 389.4
2778 Female, age 91, both hemispheres 386.0
2566 Female, age 72, unknown 315.1
2037 Male, age 80, right hemisphere 300.6
2111 Female, age 85, right hemisphere 274.4
Nucleus accumbens
nTPM: 443.9
1856 Female, age 91, right hemisphere 510.5
2286 Male, age 75, left hemisphere 494.7
1783 Male, age 74, unknown 489.0
2824 Male, age 61, right hemisphere 469.9
1806 Female, age 85, left hemisphere 447.8
2698 Female, age 72, unknown 432.6
2391 Female, age 94, left hemisphere 410.7
2732 Male, age 80, right hemisphere 296.0
Nucleus basalis of Meynert
nTPM: 384.3
2484 Female, age 94, left hemisphere 433.0
2821 Male, age 75, both hemispheres 388.6
2393 Male, age 80, right hemisphere 369.2
2569 Male, age 61, both hemispheres 346.5
Nucleus of the diagonal band
nTPM: 586.5
2195 Female, age 85, both hemispheres 668.9
2775 Male, age 80, right hemisphere 654.9
1812 Female, age 91, both hemispheres 618.7
2029 Male, age 61, right hemisphere 582.0
1979 Male, age 74, unknown 408.1
Putamen
nTPM: 472.3
2466 Female, age 79, unknown 551.8
1838 Male, age 80, right hemisphere 510.8
1937 Female, age 91, right hemisphere 492.8
1829 Male, age 74, unknown 488.7
2647 Male, age 75, left hemisphere 449.6
2489 Female, age 72, unknown 406.9
2482 Female, age 94, left hemisphere 405.3
Septal nuclei
nTPM: 510.0
1960 Male, age 74, unknown 698.1
2629 Female, age 94, right hemisphere 593.6
2031 Female, age 72, unknown 561.2
2009 Female, age 91, both hemispheres 533.4
2059 Female, age 85, both hemispheres 499.6
2394 Male, age 61, left hemisphere 372.4
2199 Male, age 80, right hemisphere 311.9
Stria terminalis, bed nucleus
nTPM: 587.3
1974 Female, age 91, both hemispheres 695.9
2486 Female, age 94, both hemispheres 611.0
2201 Male, age 74, unknown 455.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 217.4
Samples: 246

Max nTPM: 439.1
Min nTPM: 84.9
Std nTPM: 66.0
Median nTPM: 213.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 439.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 390.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 383.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 378.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 347.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 347.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 347.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 344.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 341.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 333.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 333.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 327.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 325.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 324.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 323.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 322.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 322.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 320.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 317.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 317.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 316.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 316.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 315.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 314.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 310.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 307.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 304.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 302.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 301.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 300.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 300.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 298.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 294.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 294.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 293.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 291.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 291.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 291.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 289.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 287.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 283.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 281.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 281.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 279.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 278.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 278.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 276.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 275.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 273.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 273.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 272.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 271.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 270.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 269.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 267.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 266.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 266.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 263.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 263.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 262.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 262.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 262.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 262.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 260.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 260.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 256.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 256.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 256.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 255.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 255.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 254.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 252.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 252.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 252.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 251.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 251.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 250.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 250.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 250.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 249.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 247.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 246.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 246.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 245.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 244.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 243.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 243.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 241.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 239.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 237.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 237.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 237.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 237.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 236.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 236.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 235.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 234.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 234.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 234.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 233.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 232.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 232.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 232.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 231.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 230.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 230.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 230.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 229.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 229.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 226.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 226.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 221.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 221.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 221.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 221.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 221.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 220.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 218.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 217.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 217.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 217.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 214.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 214.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 213.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 213.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 213.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 212.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 212.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 211.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 211.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 210.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 208.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 207.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 204.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 204.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 203.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 201.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 200.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 200.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 199.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 199.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 199.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 198.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 198.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 197.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 195.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 195.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 194.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 192.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 192.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 192.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 192.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 191.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 191.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 190.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 190.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 190.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 188.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 188.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 187.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 186.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 183.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 183.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 183.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 182.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 181.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 181.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 179.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 178.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 178.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 177.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 176.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 176.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 175.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 174.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 171.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 171.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 171.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 171.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 170.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 168.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 168.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 167.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 167.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 166.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 165.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 164.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 164.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 162.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 162.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 162.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 160.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 160.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 159.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 158.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 158.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 156.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 155.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 153.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 151.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 151.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 151.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 151.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 150.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 150.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 149.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 148.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 147.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 146.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 143.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 142.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 140.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 139.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 138.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 137.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 136.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 135.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 133.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 127.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 126.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 126.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 126.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 125.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 125.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 125.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 124.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 123.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 123.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 123.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 122.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 122.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 121.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 120.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 119.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 117.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 116.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 116.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 114.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 113.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 113.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 108.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 107.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 107.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 104.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 95.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 84.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 214.5
Samples: 246

Max nTPM: 390.1
Min nTPM: 39.3
Std nTPM: 65.5
Median nTPM: 218.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 390.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 370.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 366.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 353.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 349.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 339.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 336.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 334.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 334.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 329.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 328.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 325.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 318.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 318.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 317.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 315.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 313.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 308.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 308.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 307.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 306.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 304.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 302.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 301.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 298.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 298.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 298.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 297.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 296.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 295.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 293.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 292.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 292.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 288.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 285.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 284.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 283.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 283.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 280.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 280.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 279.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 277.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 276.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 274.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 271.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 269.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 268.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 268.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 267.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 267.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 267.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 265.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 264.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 263.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 262.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 261.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 260.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 258.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 258.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 257.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 257.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 257.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 256.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 256.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 256.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 254.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 254.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 253.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 251.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 251.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 251.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 250.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 248.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 246.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 246.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 246.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 245.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 245.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 245.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 243.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 243.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 242.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 242.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 242.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 241.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 241.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 240.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 240.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 239.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 239.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 238.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 238.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 237.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 237.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 237.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 237.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 237.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 236.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 236.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 235.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 234.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 234.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 233.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 233.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 232.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 231.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 228.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 227.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 226.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 225.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 225.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 224.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 224.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 224.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 223.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 223.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 222.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 221.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 221.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 220.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 219.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 218.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 218.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 218.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 217.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 217.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 217.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 215.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 215.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 214.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 214.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 214.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 214.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 213.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 212.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 211.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 211.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 210.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 210.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 207.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 206.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 206.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 206.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 205.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 205.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 204.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 204.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 203.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 203.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 203.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 203.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 201.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 197.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 196.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 193.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 191.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 191.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 190.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 190.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 190.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 188.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 188.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 188.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 186.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 186.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 186.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 184.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 183.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 183.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 182.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 181.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 178.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 178.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 176.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 176.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 176.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 176.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 175.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 174.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 171.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 171.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 170.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 170.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 168.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 167.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 164.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 163.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 160.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 159.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 159.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 158.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 157.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 156.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 156.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 154.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 152.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 151.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 150.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 150.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 149.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 149.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 145.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 144.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 143.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 143.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 142.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 142.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 140.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 140.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 140.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 140.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 138.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 137.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 136.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 136.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 134.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 134.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 133.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 129.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 128.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 127.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 125.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 124.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 120.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 119.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 118.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 118.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 118.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 115.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 115.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 114.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 114.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 112.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 110.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 108.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 106.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 102.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 100.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 95.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 94.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 79.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 78.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 74.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 69.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 67.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 39.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 208.1
Samples: 205

Max nTPM: 342.9
Min nTPM: 70.9
Std nTPM: 61.6
Median nTPM: 204.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 342.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 331.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 317.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 317.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 317.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 316.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 311.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 308.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 307.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 303.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 299.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 299.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 297.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 297.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 295.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 295.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 295.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 294.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 294.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 293.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 293.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 293.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 292.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 291.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 291.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 290.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 290.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 286.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 285.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 284.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 282.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 281.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 281.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 277.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 277.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 276.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 276.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 275.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 275.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 273.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 271.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 270.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 269.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 269.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 265.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 265.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 264.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 264.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 263.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 262.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 262.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 260.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 259.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 258.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 257.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 257.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 257.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 255.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 253.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 252.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 252.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 252.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 248.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 246.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 244.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 243.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 242.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 241.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 236.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 235.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 234.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 232.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 230.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 230.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 230.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 230.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 230.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 229.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 229.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 228.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 227.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 227.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 226.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 226.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 225.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 224.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 220.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 220.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 220.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 219.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 218.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 217.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 217.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 216.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 213.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 213.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 212.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 211.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 210.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 209.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 207.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 206.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 204.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 204.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 204.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 204.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 202.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 202.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 200.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 199.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 199.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 199.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 198.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 198.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 198.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 197.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 196.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 194.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 190.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 190.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 190.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 189.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 188.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 187.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 186.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 186.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 185.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 184.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 184.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 181.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 180.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 180.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 179.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 178.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 177.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 177.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 176.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 175.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 175.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 175.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 172.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 172.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 170.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 168.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 164.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 163.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 163.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 163.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 163.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 162.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 160.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 159.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 158.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 155.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 155.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 155.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 154.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 154.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 154.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 153.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 152.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 151.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 151.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 151.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 151.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 146.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 143.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 142.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 140.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 140.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 134.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 132.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 132.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 132.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 130.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 129.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 128.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 127.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 127.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 127.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 125.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 125.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 124.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 123.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 123.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 122.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 121.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 119.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 119.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 119.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 118.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 118.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 117.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 117.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 116.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 115.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 113.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 110.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 109.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 107.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 104.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 101.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 101.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 91.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 70.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1101.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 441.5
FF:10164-103B2 76 years, female 441.5
Nucleus accumbens
Scaled Tags Per Million: 1101.9
FF:10037-101F1 23-56 years, mixed 1101.9
Putamen
Scaled Tags Per Million: 824.7
FF:10176-103C5 60 years, female 824.7
Globus pallidus
Scaled Tags Per Million: 345.7
FF:10175-103C4 60 years, female 371.9
FF:10161-103A8 76 years, female 319.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

388.8
Pig sample Sample description nTPM
Caudate
nTPM: 388.8
Samples: 4

Max nTPM: 462.5
Min nTPM: 300.5
Sample A Female 300.5
Sample B Female 438.4
Sample C Male 462.5
Sample D Male 353.9
Putamen
nTPM: 380.1
Samples: 4

Max nTPM: 477.1
Min nTPM: 276.0
Sample A Female 276.0
Sample B Female 348.6
Sample C Male 477.1
Sample D Male 418.7
Septum
nTPM: 378.2
Samples: 4

Max nTPM: 447.9
Min nTPM: 351.1
Sample A Female 354.6
Sample B Female 359.1
Sample C Male 447.9
Sample D Male 351.1
Ventral pallidum
nTPM: 372.4
Samples: 4

Max nTPM: 485.5
Min nTPM: 315.6
Sample A Female 334.2
Sample B Female 354.1
Sample C Male 485.5
Sample D Male 315.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 101.3
Samples: 4

Max nTPM: 111.7
Min nTPM: 93.2
Sample A Male 93.2
Sample B Male 96.6
Sample C Female 103.5
Sample D Female 111.7
Septum
nTPM: 189.0
Samples: 4

Max nTPM: 211.4
Min nTPM: 179.8
Sample A Male 211.4
Sample B Male 179.8
Sample C Female 185.0
Sample D Female 179.9
Ventral forebrain
nTPM: 152.0
Samples: 4

Max nTPM: 171.7
Min nTPM: 131.7
Sample A Male 131.7
Sample B Male 171.7
Sample C Female 157.8
Sample D Female 146.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.2
385775 Antisense, RP_040625_01_E03, Mouse strain C57BL/6J (56 days, male) 13.2
Pallidum
Expression energy: 19.8
385775 Antisense, RP_040625_01_E03, Mouse strain C57BL/6J (56 days, male) 19.8

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