We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ISCU
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ISCU
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:272.3 nTPM
HPA Brain:160.3 nTPM
GTEx:272.3 nTPM
FANTOM5:349.0 Scaled Tags Per Million
Pig:278.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038602Antibody HPA057592Antibody CAB006329
Glial cells HighLowMedium
Neuronal cells MediumMediumHigh







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 133.1
1857 Female, age 85, left hemisphere 148.8
2481 Female, age 94, left hemisphere 144.2
2288 Male, age 75, left hemisphere 143.7
1854 Male, age 80, left hemisphere 136.4
1781 Male, age 74, unknown 128.8
2290 Female, age 72, unknown 126.4
2846 Female, age 79, unknown 123.1
2289 Male, age 61, right hemisphere 113.3
Globus pallidus, externus
nTPM: 132.3
2772 Female, age 79, unknown 221.6
2395 Male, age 75, both hemispheres 128.6
1996 Male, age 80, right hemisphere 120.1
2567 Female, age 72, unknown 97.4
2646 Male, age 61, right hemisphere 93.7
Globus pallidus, internus
nTPM: 125.7
1818 Male, age 74, unknown 196.1
2483 Female, age 94, right hemisphere 140.1
2037 Male, age 80, right hemisphere 135.5
2287 Male, age 75, right hemisphere 132.3
2778 Female, age 91, both hemispheres 106.6
2566 Female, age 72, unknown 102.5
2111 Female, age 85, right hemisphere 66.9
Nucleus accumbens
nTPM: 148.5
1856 Female, age 91, right hemisphere 214.7
2824 Male, age 61, right hemisphere 167.9
2698 Female, age 72, unknown 160.0
2286 Male, age 75, left hemisphere 158.0
1806 Female, age 85, left hemisphere 142.9
1783 Male, age 74, unknown 142.0
2391 Female, age 94, left hemisphere 106.2
2732 Male, age 80, right hemisphere 96.3
Nucleus basalis of Meynert
nTPM: 109.6
2821 Male, age 75, both hemispheres 124.3
2484 Female, age 94, left hemisphere 116.2
2393 Male, age 80, right hemisphere 104.4
2569 Male, age 61, both hemispheres 93.7
Nucleus of the diagonal band
nTPM: 160.3
1812 Female, age 91, both hemispheres 195.3
2775 Male, age 80, right hemisphere 180.6
2195 Female, age 85, both hemispheres 160.1
2029 Male, age 61, right hemisphere 140.4
1979 Male, age 74, unknown 125.3
Putamen
nTPM: 120.3
1937 Female, age 91, right hemisphere 164.6
1838 Male, age 80, right hemisphere 146.2
2482 Female, age 94, left hemisphere 137.6
2466 Female, age 79, unknown 110.4
1829 Male, age 74, unknown 107.8
2647 Male, age 75, left hemisphere 97.2
2489 Female, age 72, unknown 78.0
Septal nuclei
nTPM: 141.2
1960 Male, age 74, unknown 180.5
2031 Female, age 72, unknown 162.0
2009 Female, age 91, both hemispheres 157.7
2629 Female, age 94, right hemisphere 152.7
2059 Female, age 85, both hemispheres 118.7
2199 Male, age 80, right hemisphere 109.2
2394 Male, age 61, left hemisphere 107.4
Stria terminalis, bed nucleus
nTPM: 158.8
1974 Female, age 91, both hemispheres 194.4
2486 Female, age 94, both hemispheres 148.4
2201 Male, age 74, unknown 133.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

272.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 201.2
Samples: 246

Max nTPM: 461.0
Min nTPM: 99.9
Std nTPM: 52.3
Median nTPM: 188.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 461.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 359.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 357.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 329.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 323.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 323.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 310.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 308.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 308.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 303.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 299.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 299.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 297.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 295.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 294.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 293.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 291.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 290.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 287.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 287.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 280.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 279.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 279.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 279.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 273.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 270.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 269.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 268.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 267.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 266.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 264.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 264.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 262.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 261.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 259.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 258.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 256.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 256.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 255.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 253.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 253.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 250.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 248.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 248.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 247.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 245.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 244.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 244.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 242.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 240.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 239.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 238.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 238.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 235.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 235.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 233.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 232.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 232.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 231.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 231.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 230.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 230.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 230.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 229.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 229.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 228.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 228.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 227.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 227.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 226.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 225.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 223.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 220.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 219.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 219.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 219.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 219.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 218.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 218.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 217.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 215.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 215.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 214.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 214.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 213.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 213.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 212.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 211.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 211.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 210.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 210.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 210.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 209.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 208.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 208.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 208.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 207.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 206.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 206.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 206.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 204.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 202.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 202.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 202.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 202.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 201.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 200.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 200.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 199.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 199.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 198.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 198.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 197.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 196.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 196.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 196.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 193.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 193.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 192.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 192.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 190.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 189.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 189.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 188.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 187.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 187.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 187.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 186.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 186.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 186.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 186.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 185.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 185.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 185.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 184.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 184.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 184.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 182.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 181.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 181.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 181.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 181.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 180.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 179.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 179.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 179.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 178.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 178.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 178.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 177.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 177.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 177.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 176.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 176.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 175.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 175.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 175.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 174.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 174.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 174.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 174.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 173.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 173.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 172.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 172.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 172.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 171.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 171.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 171.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 171.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 170.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 170.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 168.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 167.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 167.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 166.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 166.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 165.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 165.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 165.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 165.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 165.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 165.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 165.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 165.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 164.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 164.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 163.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 163.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 163.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 163.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 163.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 162.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 162.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 162.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 161.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 161.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 160.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 160.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 159.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 158.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 157.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 156.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 156.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 155.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 155.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 155.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 153.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 151.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 151.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 150.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 150.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 149.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 149.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 148.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 147.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 147.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 147.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 145.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 145.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 145.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 143.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 143.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 142.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 141.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 140.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 139.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 138.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 134.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 134.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 133.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 132.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 130.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 129.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 129.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 129.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 128.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 124.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 124.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 124.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 121.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 118.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 118.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 118.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 116.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 99.9
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 272.3
Samples: 246

Max nTPM: 478.1
Min nTPM: 117.0
Std nTPM: 67.3
Median nTPM: 268.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 478.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 456.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 447.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 432.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 415.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 414.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 412.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 410.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 402.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 399.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 398.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 395.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 395.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 384.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 383.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 380.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 374.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 374.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 370.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 370.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 369.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 367.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 365.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 363.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 362.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 361.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 360.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 359.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 357.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 357.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 356.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 354.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 354.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 353.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 346.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 346.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 345.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 344.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 340.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 339.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 339.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 334.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 331.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 331.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 330.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 329.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 328.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 328.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 327.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 327.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 325.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 324.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 323.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 322.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 321.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 320.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 318.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 318.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 316.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 316.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 314.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 314.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 313.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 312.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 311.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 310.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 310.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 310.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 309.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 308.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 308.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 307.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 303.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 302.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 302.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 302.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 301.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 301.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 301.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 301.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 300.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 300.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 299.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 299.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 297.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 296.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 295.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 295.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 294.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 294.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 293.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 293.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 292.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 292.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 292.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 291.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 289.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 289.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 287.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 284.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 284.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 282.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 281.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 280.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 280.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 279.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 279.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 278.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 278.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 278.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 278.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 277.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 274.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 274.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 271.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 271.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 271.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 271.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 270.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 269.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 269.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 268.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 268.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 268.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 268.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 266.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 266.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 266.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 265.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 264.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 263.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 262.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 262.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 262.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 261.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 260.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 260.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 259.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 259.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 258.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 257.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 257.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 256.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 256.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 256.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 255.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 253.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 252.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 252.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 252.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 251.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 251.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 250.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 249.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 248.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 247.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 246.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 246.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 246.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 244.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 243.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 243.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 243.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 242.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 241.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 241.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 241.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 240.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 240.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 240.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 240.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 239.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 239.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 238.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 234.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 233.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 233.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 231.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 231.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 230.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 228.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 225.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 225.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 223.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 223.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 221.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 220.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 219.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 218.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 217.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 217.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 216.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 215.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 215.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 214.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 212.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 212.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 211.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 211.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 211.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 210.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 210.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 209.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 207.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 207.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 204.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 204.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 203.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 202.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 201.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 199.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 199.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 198.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 198.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 198.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 197.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 197.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 196.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 193.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 192.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 191.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 190.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 187.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 183.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 183.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 181.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 178.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 173.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 172.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 169.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 167.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 163.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 162.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 162.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 162.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 160.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 159.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 156.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 153.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 153.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 148.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 145.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 143.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 138.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 126.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 117.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 196.0
Samples: 205

Max nTPM: 388.7
Min nTPM: 98.4
Std nTPM: 50.1
Median nTPM: 187.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 388.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 358.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 330.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 329.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 328.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 321.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 314.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 312.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 297.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 291.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 287.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 282.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 278.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 274.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 270.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 267.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 266.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 265.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 262.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 260.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 260.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 259.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 258.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 258.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 256.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 256.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 255.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 254.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 252.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 251.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 251.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 251.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 249.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 248.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 247.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 247.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 246.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 244.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 243.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 239.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 236.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 235.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 234.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 234.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 232.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 231.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 228.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 227.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 225.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 223.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 223.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 222.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 222.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 220.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 219.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 219.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 218.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 217.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 217.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 217.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 216.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 214.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 214.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 214.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 213.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 211.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 211.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 210.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 210.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 208.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 208.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 206.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 206.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 206.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 206.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 206.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 205.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 205.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 205.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 204.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 202.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 201.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 200.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 199.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 198.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 197.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 196.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 195.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 194.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 193.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 193.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 193.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 193.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 193.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 193.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 192.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 192.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 191.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 189.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 189.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 188.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 188.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 187.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 187.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 185.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 184.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 184.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 184.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 183.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 183.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 183.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 183.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 182.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 182.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 181.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 180.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 179.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 179.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 178.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 177.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 175.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 174.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 174.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 173.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 173.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 172.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 171.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 171.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 170.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 170.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 170.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 169.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 169.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 169.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 168.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 168.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 168.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 168.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 168.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 167.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 166.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 166.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 165.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 164.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 164.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 164.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 164.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 163.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 162.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 162.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 161.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 161.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 160.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 160.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 160.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 159.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 156.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 156.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 155.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 155.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 154.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 153.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 153.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 153.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 153.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 152.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 152.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 150.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 150.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 149.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 148.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 148.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 147.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 146.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 146.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 146.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 145.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 144.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 142.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 141.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 141.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 141.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 140.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 140.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 139.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 139.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 138.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 137.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 137.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 137.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 136.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 135.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 134.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 133.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 133.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 132.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 129.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 128.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 128.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 127.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 123.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 120.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 115.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 101.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 98.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

349.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 309.9
FF:10164-103B2 76 years, female 309.9
Nucleus accumbens
Scaled Tags Per Million: 226.9
FF:10037-101F1 23-56 years, mixed 226.9
Putamen
Scaled Tags Per Million: 349.0
FF:10176-103C5 60 years, female 349.0
Globus pallidus
Scaled Tags Per Million: 169.9
FF:10175-103C4 60 years, female 216.5
FF:10161-103A8 76 years, female 123.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

278.1
Pig sample Sample description nTPM
Caudate
nTPM: 253.6
Samples: 4

Max nTPM: 344.1
Min nTPM: 190.3
Sample A Female 190.3
Sample B Female 268.8
Sample C Male 344.1
Sample D Male 211.2
Putamen
nTPM: 278.1
Samples: 4

Max nTPM: 378.0
Min nTPM: 216.1
Sample A Female 216.1
Sample B Female 223.0
Sample C Male 378.0
Sample D Male 295.2
Septum
nTPM: 256.4
Samples: 4

Max nTPM: 275.2
Min nTPM: 234.8
Sample A Female 234.8
Sample B Female 241.0
Sample C Male 275.2
Sample D Male 274.7
Ventral pallidum
nTPM: 246.8
Samples: 4

Max nTPM: 276.3
Min nTPM: 217.1
Sample A Female 217.1
Sample B Female 251.7
Sample C Male 276.3
Sample D Male 242.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org