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ITM2B
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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:268.7 nTPM
HPA Brain:452.4 nTPM
GTEx:268.7 nTPM
FANTOM5:935.9 Scaled Tags Per Million
Pig:579.4 nTPM
Mouse:587.9 nTPM
Allen mouse:17.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029292Antibody HPA071992
Glial cells LowMedium
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

452.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 366.5
2288 Male, age 75, left hemisphere 423.2
2481 Female, age 94, left hemisphere 420.3
2846 Female, age 79, unknown 398.5
2290 Female, age 72, unknown 387.0
1857 Female, age 85, left hemisphere 369.4
1781 Male, age 74, unknown 328.1
1854 Male, age 80, left hemisphere 321.0
2289 Male, age 61, right hemisphere 284.8
Globus pallidus, externus
nTPM: 426.3
2772 Female, age 79, unknown 554.1
1996 Male, age 80, right hemisphere 552.3
2395 Male, age 75, both hemispheres 397.0
2646 Male, age 61, right hemisphere 383.2
2567 Female, age 72, unknown 244.7
Globus pallidus, internus
nTPM: 452.4
2287 Male, age 75, right hemisphere 551.5
2037 Male, age 80, right hemisphere 520.2
2778 Female, age 91, both hemispheres 518.8
1818 Male, age 74, unknown 442.0
2483 Female, age 94, right hemisphere 427.8
2111 Female, age 85, right hemisphere 375.4
2566 Female, age 72, unknown 331.0
Nucleus accumbens
nTPM: 361.0
2286 Male, age 75, left hemisphere 474.0
2391 Female, age 94, left hemisphere 407.9
2698 Female, age 72, unknown 403.7
1856 Female, age 91, right hemisphere 377.4
1806 Female, age 85, left hemisphere 338.9
1783 Male, age 74, unknown 303.3
2824 Male, age 61, right hemisphere 301.9
2732 Male, age 80, right hemisphere 281.1
Nucleus basalis of Meynert
nTPM: 371.9
2821 Male, age 75, both hemispheres 415.9
2569 Male, age 61, both hemispheres 400.3
2484 Female, age 94, left hemisphere 353.9
2393 Male, age 80, right hemisphere 317.6
Nucleus of the diagonal band
nTPM: 407.3
2029 Male, age 61, right hemisphere 436.0
1812 Female, age 91, both hemispheres 416.2
2775 Male, age 80, right hemisphere 409.1
2195 Female, age 85, both hemispheres 404.2
1979 Male, age 74, unknown 370.8
Putamen
nTPM: 337.0
2482 Female, age 94, left hemisphere 442.8
1937 Female, age 91, right hemisphere 367.0
1829 Male, age 74, unknown 340.3
2647 Male, age 75, left hemisphere 329.0
2466 Female, age 79, unknown 299.1
1838 Male, age 80, right hemisphere 294.5
2489 Female, age 72, unknown 286.0
Septal nuclei
nTPM: 357.1
2031 Female, age 72, unknown 438.5
2199 Male, age 80, right hemisphere 398.3
2629 Female, age 94, right hemisphere 388.8
1960 Male, age 74, unknown 353.8
2009 Female, age 91, both hemispheres 350.4
2059 Female, age 85, both hemispheres 296.4
2394 Male, age 61, left hemisphere 273.3
Stria terminalis, bed nucleus
nTPM: 343.1
1974 Female, age 91, both hemispheres 378.7
2201 Male, age 74, unknown 344.3
2486 Female, age 94, both hemispheres 306.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 267.6
Samples: 246

Max nTPM: 586.7
Min nTPM: 182.1
Std nTPM: 47.1
Median nTPM: 259.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 586.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 419.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 398.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 393.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 385.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 374.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 370.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 369.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 368.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 365.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 364.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 362.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 355.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 345.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 341.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 339.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 338.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 337.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 333.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 333.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 332.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 331.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 329.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 328.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 326.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 325.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 323.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 323.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 322.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 322.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 321.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 321.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 321.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 315.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 315.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 314.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 314.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 313.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 310.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 310.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 307.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 306.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 302.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 301.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 298.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 298.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 298.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 298.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 296.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 295.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 295.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 292.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 292.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 292.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 291.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 291.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 291.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 291.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 290.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 289.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 288.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 288.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 288.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 287.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 287.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 285.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 285.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 285.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 284.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 284.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 283.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 282.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 281.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 281.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 281.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 281.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 281.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 281.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 281.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 280.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 279.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 279.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 278.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 277.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 276.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 275.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 275.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 274.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 274.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 274.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 272.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 272.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 271.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 271.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 271.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 270.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 270.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 269.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 269.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 268.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 268.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 268.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 267.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 266.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 266.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 266.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 266.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 266.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 265.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 265.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 265.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 264.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 264.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 264.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 263.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 263.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 263.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 262.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 262.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 261.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 260.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 259.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 259.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 259.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 259.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 258.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 257.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 257.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 256.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 256.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 256.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 256.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 256.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 255.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 255.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 254.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 254.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 253.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 253.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 253.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 252.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 252.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 251.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 251.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 251.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 250.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 250.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 250.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 250.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 249.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 249.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 249.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 248.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 248.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 248.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 248.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 247.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 247.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 247.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 247.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 247.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 246.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 245.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 245.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 245.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 244.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 244.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 244.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 243.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 243.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 242.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 242.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 242.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 242.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 241.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 241.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 241.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 241.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 241.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 241.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 240.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 240.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 240.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 240.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 239.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 238.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 238.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 238.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 238.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 238.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 237.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 236.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 236.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 236.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 234.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 233.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 233.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 233.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 232.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 231.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 231.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 229.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 229.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 228.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 226.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 226.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 225.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 225.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 224.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 224.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 223.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 223.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 222.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 222.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 221.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 220.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 220.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 219.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 219.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 218.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 218.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 217.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 214.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 213.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 212.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 212.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 212.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 210.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 210.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 209.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 209.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 207.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 205.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 205.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 203.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 203.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 203.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 203.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 201.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 200.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 198.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 197.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 195.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 193.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 189.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 182.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 244.5
Samples: 246

Max nTPM: 428.6
Min nTPM: 165.5
Std nTPM: 44.4
Median nTPM: 235.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 428.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 394.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 393.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 390.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 379.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 362.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 349.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 348.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 348.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 343.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 340.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 338.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 327.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 322.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 319.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 319.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 319.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 316.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 315.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 312.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 309.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 308.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 305.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 305.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 304.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 303.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 303.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 302.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 302.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 301.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 301.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 298.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 296.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 293.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 293.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 292.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 290.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 288.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 286.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 286.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 284.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 284.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 284.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 284.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 284.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 283.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 281.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 277.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 277.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 274.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 273.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 273.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 272.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 271.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 268.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 267.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 267.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 266.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 265.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 264.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 264.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 264.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 263.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 263.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 262.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 261.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 260.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 259.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 258.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 258.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 256.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 256.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 256.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 255.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 255.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 254.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 254.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 254.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 253.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 252.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 252.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 251.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 250.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 250.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 250.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 250.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 250.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 249.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 249.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 249.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 248.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 248.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 247.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 247.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 246.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 246.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 246.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 245.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 245.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 243.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 243.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 243.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 242.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 242.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 241.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 241.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 241.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 240.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 240.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 239.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 239.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 239.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 239.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 238.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 238.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 237.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 237.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 237.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 236.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 236.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 236.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 236.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 235.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 235.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 234.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 234.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 233.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 233.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 232.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 232.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 231.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 231.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 231.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 230.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 230.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 229.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 229.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 229.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 229.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 228.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 228.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 227.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 227.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 227.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 227.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 227.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 227.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 225.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 225.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 225.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 225.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 225.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 225.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 224.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 224.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 223.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 222.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 222.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 222.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 222.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 221.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 221.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 221.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 221.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 221.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 221.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 220.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 219.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 219.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 219.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 219.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 219.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 219.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 219.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 219.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 219.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 219.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 218.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 218.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 217.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 217.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 216.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 216.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 216.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 216.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 216.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 216.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 216.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 216.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 214.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 213.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 213.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 213.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 213.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 213.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 212.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 212.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 212.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 212.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 211.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 211.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 208.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 207.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 206.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 206.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 205.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 205.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 205.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 205.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 205.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 205.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 204.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 204.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 204.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 203.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 203.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 203.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 202.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 201.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 200.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 199.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 197.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 196.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 196.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 193.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 192.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 192.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 191.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 190.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 190.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 189.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 188.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 188.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 187.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 184.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 183.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 183.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 182.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 181.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 180.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 180.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 176.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 172.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 170.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 169.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 165.5
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 268.7
Samples: 205

Max nTPM: 482.5
Min nTPM: 185.1
Std nTPM: 49.7
Median nTPM: 263.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 482.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 434.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 426.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 395.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 380.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 373.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 366.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 366.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 366.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 364.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 362.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 361.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 358.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 357.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 356.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 352.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 351.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 341.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 336.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 336.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 336.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 335.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 334.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 333.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 332.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 331.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 328.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 325.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 321.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 314.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 314.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 312.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 309.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 308.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 308.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 307.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 304.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 303.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 303.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 303.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 302.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 302.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 302.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 300.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 300.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 299.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 298.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 298.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 297.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 297.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 296.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 295.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 294.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 293.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 291.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 290.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 289.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 289.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 288.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 287.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 287.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 286.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 286.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 286.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 285.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 284.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 284.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 284.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 284.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 284.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 283.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 283.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 282.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 281.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 280.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 279.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 279.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 279.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 278.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 278.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 276.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 276.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 275.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 275.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 274.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 274.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 274.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 274.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 273.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 273.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 273.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 272.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 269.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 269.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 269.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 268.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 267.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 267.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 265.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 265.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 264.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 264.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 263.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 262.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 262.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 260.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 259.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 256.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 256.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 256.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 256.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 253.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 251.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 250.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 248.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 247.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 246.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 246.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 246.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 246.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 246.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 246.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 245.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 245.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 245.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 245.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 245.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 245.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 244.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 244.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 244.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 244.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 243.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 243.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 243.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 242.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 242.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 242.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 241.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 240.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 239.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 239.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 239.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 238.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 237.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 236.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 235.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 235.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 234.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 233.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 232.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 232.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 231.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 230.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 230.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 229.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 229.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 228.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 228.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 228.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 228.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 228.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 228.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 227.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 226.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 226.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 226.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 225.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 224.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 223.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 223.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 223.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 222.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 221.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 221.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 221.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 220.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 220.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 220.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 218.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 215.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 215.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 213.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 213.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 213.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 212.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 212.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 211.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 211.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 210.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 208.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 207.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 206.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 205.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 201.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 200.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 198.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 195.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 194.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 193.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 192.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 191.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 189.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 186.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 185.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

935.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 799.1
FF:10164-103B2 76 years, female 799.1
Nucleus accumbens
Scaled Tags Per Million: 891.1
FF:10037-101F1 23-56 years, mixed 891.1
Putamen
Scaled Tags Per Million: 791.3
FF:10176-103C5 60 years, female 791.3
Globus pallidus
Scaled Tags Per Million: 935.9
FF:10175-103C4 60 years, female 1030.4
FF:10161-103A8 76 years, female 841.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

579.4
Pig sample Sample description nTPM
Caudate
nTPM: 386.6
Samples: 4

Max nTPM: 440.8
Min nTPM: 334.3
Sample A Female 406.4
Sample B Female 364.7
Sample C Male 440.8
Sample D Male 334.3
Putamen
nTPM: 579.4
Samples: 4

Max nTPM: 700.4
Min nTPM: 454.4
Sample A Female 700.4
Sample B Female 454.4
Sample C Male 658.0
Sample D Male 504.8
Septum
nTPM: 558.1
Samples: 4

Max nTPM: 603.4
Min nTPM: 464.5
Sample A Female 591.2
Sample B Female 464.5
Sample C Male 603.4
Sample D Male 573.1
Ventral pallidum
nTPM: 478.4
Samples: 4

Max nTPM: 508.5
Min nTPM: 407.7
Sample A Female 407.7
Sample B Female 497.3
Sample C Male 508.5
Sample D Male 500.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

587.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 548.7
Samples: 4

Max nTPM: 572.3
Min nTPM: 530.4
Sample A Male 546.1
Sample B Male 546.0
Sample C Female 530.4
Sample D Female 572.3
Septum
nTPM: 587.9
Samples: 4

Max nTPM: 649.2
Min nTPM: 509.2
Sample A Male 509.2
Sample B Male 649.2
Sample C Female 624.4
Sample D Female 568.9
Ventral forebrain
nTPM: 543.0
Samples: 4

Max nTPM: 613.0
Min nTPM: 504.0
Sample A Male 551.0
Sample B Male 504.0
Sample C Female 613.0
Sample D Female 504.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 17.5
532581 Antisense, RP_040810_02_C03, Mouse strain C57BL/6J (56 days, male) 17.5
Pallidum
Expression energy: 17.7
532581 Antisense, RP_040810_02_C03, Mouse strain C57BL/6J (56 days, male) 17.7

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