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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:86.3 nTPM
HPA Brain:207.4 nTPM
GTEx:86.3 nTPM
FANTOM5:145.4 Scaled Tags Per Million
Pig:141.0 nTPM
Mouse:163.9 nTPM
Allen mouse:12.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA024517
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

207.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 168.4
2481 Female, age 94, left hemisphere 214.3
1857 Female, age 85, left hemisphere 180.1
1854 Male, age 80, left hemisphere 166.9
2289 Male, age 61, right hemisphere 165.1
2290 Female, age 72, unknown 163.5
2288 Male, age 75, left hemisphere 156.6
1781 Male, age 74, unknown 151.8
2846 Female, age 79, unknown 149.2
Globus pallidus, externus
nTPM: 197.7
2646 Male, age 61, right hemisphere 245.4
2772 Female, age 79, unknown 201.0
2395 Male, age 75, both hemispheres 194.7
1996 Male, age 80, right hemisphere 191.2
2567 Female, age 72, unknown 156.0
Globus pallidus, internus
nTPM: 187.9
2483 Female, age 94, right hemisphere 253.9
2287 Male, age 75, right hemisphere 207.6
2778 Female, age 91, both hemispheres 203.3
2037 Male, age 80, right hemisphere 171.7
1818 Male, age 74, unknown 168.2
2111 Female, age 85, right hemisphere 159.0
2566 Female, age 72, unknown 151.8
Nucleus accumbens
nTPM: 172.7
2824 Male, age 61, right hemisphere 215.7
2286 Male, age 75, left hemisphere 178.9
1856 Female, age 91, right hemisphere 171.3
1783 Male, age 74, unknown 169.4
1806 Female, age 85, left hemisphere 169.4
2698 Female, age 72, unknown 165.0
2391 Female, age 94, left hemisphere 163.2
2732 Male, age 80, right hemisphere 148.4
Nucleus basalis of Meynert
nTPM: 182.6
2569 Male, age 61, both hemispheres 272.3
2484 Female, age 94, left hemisphere 167.8
2393 Male, age 80, right hemisphere 153.9
2821 Male, age 75, both hemispheres 136.5
Nucleus of the diagonal band
nTPM: 207.4
1812 Female, age 91, both hemispheres 246.3
2029 Male, age 61, right hemisphere 214.0
2775 Male, age 80, right hemisphere 212.6
2195 Female, age 85, both hemispheres 203.4
1979 Male, age 74, unknown 160.9
Putamen
nTPM: 156.1
2647 Male, age 75, left hemisphere 178.7
2466 Female, age 79, unknown 161.6
2482 Female, age 94, left hemisphere 161.2
1937 Female, age 91, right hemisphere 158.2
1838 Male, age 80, right hemisphere 155.3
1829 Male, age 74, unknown 154.6
2489 Female, age 72, unknown 123.3
Septal nuclei
nTPM: 188.1
2031 Female, age 72, unknown 219.9
1960 Male, age 74, unknown 216.9
2009 Female, age 91, both hemispheres 204.0
2059 Female, age 85, both hemispheres 193.3
2629 Female, age 94, right hemisphere 171.0
2394 Male, age 61, left hemisphere 157.9
2199 Male, age 80, right hemisphere 153.4
Stria terminalis, bed nucleus
nTPM: 162.4
1974 Female, age 91, both hemispheres 183.4
2201 Male, age 74, unknown 156.5
2486 Female, age 94, both hemispheres 147.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 82.3
Samples: 246

Max nTPM: 161.3
Min nTPM: 50.2
Std nTPM: 14.7
Median nTPM: 81.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 161.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 142.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 127.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 126.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 125.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 117.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 117.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 113.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 112.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 111.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 110.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 109.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 108.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 105.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 105.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 105.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 104.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 104.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 102.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 100.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 100.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 100.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 100.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 100.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 99.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 99.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 99.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 99.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 98.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 97.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 97.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 96.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 95.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 95.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 95.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 95.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 95.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 94.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 94.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 94.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 94.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 94.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 93.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 93.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 93.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 93.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 93.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 93.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 93.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 92.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 92.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 91.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 91.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 91.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 91.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 91.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 91.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 91.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 90.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 90.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 89.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 89.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 89.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 89.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 89.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 88.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 88.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 87.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 87.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 87.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 87.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 87.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 87.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 87.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 86.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 86.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 86.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 85.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 85.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 85.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 85.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 84.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 84.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 84.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 84.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 84.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 84.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 84.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 84.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 84.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 84.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 83.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 83.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 83.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 83.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 83.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 83.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 82.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 82.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 82.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 82.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 82.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 82.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 82.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 82.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 81.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 81.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 81.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 81.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 81.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 81.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 81.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 81.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 81.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 81.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 81.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 81.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 81.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 81.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 81.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 81.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 80.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 80.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 80.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 80.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 80.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 80.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 80.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 80.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 80.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 79.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 79.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 79.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 79.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 79.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 79.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 79.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 79.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 78.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 78.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 78.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 78.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 78.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 78.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 78.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 78.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 78.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 78.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 78.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 77.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 77.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 77.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 77.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 77.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 77.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 77.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 77.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 77.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 77.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 77.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 76.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 76.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 76.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 76.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 75.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 75.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 75.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 75.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 75.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 75.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 75.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 74.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 74.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 74.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 74.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 73.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 73.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 73.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 73.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 73.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 73.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 73.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 73.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 72.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 72.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 72.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 72.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 72.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 72.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 72.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 71.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 71.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 71.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 70.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 70.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 70.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 70.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 70.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 69.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 69.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 69.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 69.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 69.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 69.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 68.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 68.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 68.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 68.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 67.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 67.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 67.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 67.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 67.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 67.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 66.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 65.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 65.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 65.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 65.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 65.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 65.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 65.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 64.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 64.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 63.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 62.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 61.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 61.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 61.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 61.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 60.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 59.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 58.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 57.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 56.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 56.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 56.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 54.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 50.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 50.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 86.3
Samples: 246

Max nTPM: 135.9
Min nTPM: 33.0
Std nTPM: 15.2
Median nTPM: 86.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 135.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 126.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 124.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 122.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 122.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 118.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 116.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 116.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 114.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 114.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 113.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 109.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 108.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 107.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 107.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 106.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 106.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 106.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 106.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 105.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 105.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 105.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 104.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 104.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 104.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 104.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 103.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 103.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 103.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 102.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 102.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 101.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 101.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 101.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 101.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 101.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 101.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 101.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 101.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 100.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 100.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 100.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 100.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 99.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 99.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 99.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 98.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 98.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 98.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 98.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 98.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 97.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 97.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 97.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 97.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 97.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 97.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 97.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 97.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 96.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 96.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 96.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 96.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 96.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 95.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 95.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 95.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 94.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 94.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 94.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 94.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 94.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 94.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 94.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 94.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 93.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 93.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 93.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 93.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 93.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 92.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 92.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 92.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 92.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 92.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 91.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 91.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 91.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 90.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 90.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 90.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 90.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 90.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 90.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 90.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 90.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 89.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 89.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 89.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 89.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 89.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 89.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 89.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 89.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 89.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 89.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 88.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 88.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 88.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 88.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 88.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 88.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 88.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 88.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 87.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 87.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 87.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 87.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 87.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 87.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 87.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 87.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 87.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 86.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 86.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 86.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 86.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 86.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 86.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 86.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 85.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 85.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 85.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 85.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 85.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 85.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 85.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 84.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 84.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 84.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 84.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 84.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 84.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 84.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 84.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 83.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 83.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 83.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 83.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 83.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 83.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 83.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 83.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 83.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 83.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 83.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 82.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 82.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 82.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 82.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 82.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 81.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 81.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 81.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 81.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 81.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 80.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 80.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 80.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 79.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 79.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 79.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 79.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 79.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 79.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 79.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 79.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 78.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 78.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 78.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 78.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 78.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 78.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 78.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 78.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 77.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 77.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 76.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 76.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 76.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 76.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 75.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 74.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 74.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 74.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 74.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 73.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 73.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 72.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 72.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 72.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 71.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 71.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 71.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 71.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 71.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 70.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 70.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 70.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 69.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 69.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 69.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 69.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 68.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 68.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 67.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 67.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 67.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 67.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 67.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 67.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 65.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 65.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 64.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 64.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 63.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 63.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 63.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 62.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 62.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 62.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 62.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 61.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 59.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 59.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 59.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 59.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 58.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 58.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 57.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 54.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 53.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 53.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 50.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 45.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 33.0
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Brain - Putamen (basal ganglia)
Average nTPM: 77.8
Samples: 205

Max nTPM: 161.6
Min nTPM: 37.4
Std nTPM: 14.1
Median nTPM: 75.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 161.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 124.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 118.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 117.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 110.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 108.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 107.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 106.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 104.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 104.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 104.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 102.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 102.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 100.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 99.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 96.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 96.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 96.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 96.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 95.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 94.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 93.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 93.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 93.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 92.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 92.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 92.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 92.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 91.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 91.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 89.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 89.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 88.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 88.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 88.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 88.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 87.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 87.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 87.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 87.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 87.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 86.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 86.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 86.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 85.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 85.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 85.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 85.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 84.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 84.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 84.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 84.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 83.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 83.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 83.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 83.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 82.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 82.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 82.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 82.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 81.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 81.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 81.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 81.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 81.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 81.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 81.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 81.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 81.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 80.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 80.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 80.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 80.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 79.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 79.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 79.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 79.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 79.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 79.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 79.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 78.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 78.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 78.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 78.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 78.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 77.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 77.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 77.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 77.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 77.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 77.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 77.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 77.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 76.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 76.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 76.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 76.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 76.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 76.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 76.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 76.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 76.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 75.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 75.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 75.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 75.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 75.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 75.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 75.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 74.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 74.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 74.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 74.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 74.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 74.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 74.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 74.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 74.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 74.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 73.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 73.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 73.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 73.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 72.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 72.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 72.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 72.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 72.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 72.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 72.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 72.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 72.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 72.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 72.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 72.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 72.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 71.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 71.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 71.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 71.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 71.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 71.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 71.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 70.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 70.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 70.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 70.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 70.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 70.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 69.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 69.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 69.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 69.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 69.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 69.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 69.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 69.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 68.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 68.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 68.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 68.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 67.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 67.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 67.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 67.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 67.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 67.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 67.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 67.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 66.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 66.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 66.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 66.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 66.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 65.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 65.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 65.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 65.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 64.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 64.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 64.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 63.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 63.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 63.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 63.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 63.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 63.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 63.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 62.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 62.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 61.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 60.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 59.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 59.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 58.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 57.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 57.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 54.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 54.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 53.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 53.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 51.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 37.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

145.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 123.9
FF:10164-103B2 76 years, female 123.9
Nucleus accumbens
Scaled Tags Per Million: 126.1
FF:10037-101F1 23-56 years, mixed 126.1
Putamen
Scaled Tags Per Million: 145.4
FF:10176-103C5 60 years, female 145.4
Globus pallidus
Scaled Tags Per Million: 107.5
FF:10175-103C4 60 years, female 119.2
FF:10161-103A8 76 years, female 95.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.0
Pig sample Sample description nTPM
Caudate
nTPM: 139.0
Samples: 4

Max nTPM: 171.8
Min nTPM: 101.3
Sample A Female 101.3
Sample B Female 134.6
Sample C Male 171.8
Sample D Male 148.4
Putamen
nTPM: 141.0
Samples: 4

Max nTPM: 194.2
Min nTPM: 84.2
Sample A Female 84.2
Sample B Female 129.0
Sample C Male 194.2
Sample D Male 156.5
Septum
nTPM: 96.5
Samples: 4

Max nTPM: 111.5
Min nTPM: 68.2
Sample A Female 111.5
Sample B Female 110.5
Sample C Male 95.6
Sample D Male 68.2
Ventral pallidum
nTPM: 121.1
Samples: 4

Max nTPM: 140.3
Min nTPM: 109.6
Sample A Female 140.3
Sample B Female 109.6
Sample C Male 109.9
Sample D Male 124.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

163.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 163.9
Samples: 4

Max nTPM: 185.1
Min nTPM: 147.4
Sample A Male 174.6
Sample B Male 185.1
Sample C Female 147.4
Sample D Female 148.4
Septum
nTPM: 132.1
Samples: 4

Max nTPM: 144.4
Min nTPM: 117.5
Sample A Male 144.4
Sample B Male 117.5
Sample C Female 126.8
Sample D Female 139.7
Ventral forebrain
nTPM: 125.0
Samples: 4

Max nTPM: 133.4
Min nTPM: 113.8
Sample A Male 127.5
Sample B Male 133.4
Sample C Female 113.8
Sample D Female 125.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.8
74357551 Antisense, RP_051214_01_B03, Mouse strain C57BL/6J (56 days, male) 16.5
68795416 Antisense, RP_041122_01_C04, Mouse strain C57BL/6J (56 days, male) 9.1
Pallidum
Expression energy: 9.4
74357551 Antisense, RP_051214_01_B03, Mouse strain C57BL/6J (56 days, male) 11.8
68795416 Antisense, RP_041122_01_C04, Mouse strain C57BL/6J (56 days, male) 7.0

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