PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:211.5 nTPM
FANTOM5:249.6 Scaled Tags Per Million
Pig:297.6 nTPM
Mouse:215.5 nTPM
Allen mouse:5.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 211.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 180.2
2301 Female, age 85, both hemispheres 213.5
2188 Female, age 91, both hemispheres 189.5
2090 Male, age 80, both hemispheres 170.2
1984 Male, age 76, both hemispheres 147.8
Area postrema
nTPM: 163.6
2799 Male, age 61, both hemispheres 171.4
2306 Male, age 80, both hemispheres 166.6
2054 Male, age 76, both hemispheres 152.8
Dorsal cochlear nucleus
nTPM: 179.7
2802 Male, age 74, right hemisphere 217.8
2187 Female, age 91, both hemispheres 197.9
2378 Male, age 80, both hemispheres 186.6
2370 Male, age 61, both hemispheres 156.6
2058 Male, age 76, both hemispheres 139.6
Dorsal medullary reticular nucleus
nTPM: 167.1
2040 Female, age 85, both hemispheres 189.2
2373 Male, age 61, both hemispheres 168.6
2088 Male, age 76, both hemispheres 143.4
Dorsal motor vagal complex
nTPM: 160.7
2797 Male, age 61, both hemispheres 176.7
2000 Male, age 74, unknown 174.3
2133 Female, age 91, both hemispheres 167.7
2643 Male, age 74, both hemispheres 161.5
2844 Male, age 55, unknown 161.4
2807 Female, age 85, both hemispheres 151.3
2813 Female, age 72, unknown 148.7
2185 Male, age 76, both hemispheres 144.0
Dorsal tegmental nucleus
nTPM: 188.3
2083 Male, age 80, both hemispheres 218.1
2326 Male, age 74, both hemispheres 202.4
1936 Male, age 76, left hemisphere 173.8
2358 Male, age 61, both hemispheres 159.0
Dorsolateral tegmental area
nTPM: 184.5
2654 Male, age 80, both hemispheres 222.9
2337 Male, age 61, both hemispheres 206.0
2751 Female, age 85, both hemispheres 188.6
2360 Male, age 74, both hemispheres 163.1
2141 Male, age 76, both hemispheres 142.0
Gigantocellular reticular nuclei, medullary
nTPM: 171.5
2387 Female, age 91, both hemispheres 189.5
2314 Male, age 61, both hemispheres 188.2
1876 Female, age 85, both hemispheres 175.1
2022 Male, age 76, right hemisphere 164.4
2310 Male, age 80, both hemispheres 157.1
2462 Male, age 74, both hemispheres 154.6
Gigantocellular reticular nuclei, pars
nTPM: 160.5
2084 Female, age 85, both hemispheres 182.2
2336 Male, age 61, both hemispheres 175.7
2330 Male, age 80, both hemispheres 153.3
2706 Male, age 80, both hemispheres 146.4
2168 Male, age 76, both hemispheres 145.1
Inferior olive
nTPM: 199.2
2563 Male, age 74, both hemispheres 217.8
2085 Female, age 85, both hemispheres 211.9
2628 Female, age 91, both hemispheres 196.5
2178 Male, age 61, both hemispheres 190.4
2379 Male, age 80, both hemispheres 179.5
Kolliker-Fuse nucleus
nTPM: 187.4
2315 Male, age 76, right hemisphere 216.9
2793 Female, age 91, left hemisphere 183.1
2163 Male, age 80, both hemispheres 162.2
Lateral lemniscal nuclei
nTPM: 174.4
2320 Female, age 91, left hemisphere 189.1
2036 Male, age 80, both hemispheres 179.6
2746 Female, age 85, left hemisphere 176.4
2169 Male, age 76, both hemispheres 164.0
2453 Male, age 74, right hemisphere 162.6
Lateral medullary reticular nucleus
nTPM: 193.9
2305 Male, age 74, both hemispheres 246.7
2852 Male, age 80, both hemispheres 190.1
2374 Male, age 61, both hemispheres 184.8
2190 Female, age 85, both hemispheres 182.9
2044 Male, age 76, both hemispheres 179.8
2804 Female, age 91, both hemispheres 179.0
Lateral parabrachial nucleus
nTPM: 181.7
2139 Female, age 85, right hemisphere 203.8
2792 Male, age 76, both hemispheres 193.6
2013 Male, age 80, both hemispheres 184.2
2790 Male, age 61, both hemispheres 145.1
Lateral vestibular nucleus
nTPM: 162.7
2311 Male, age 80, both hemispheres 174.6
2184 Male, age 76, both hemispheres 150.7
Locus coeruleus
nTPM: 175.9
2123 Female, age 91, both hemispheres 209.0
2014 Male, age 55, unknown 195.2
2317 Female, age 72, unknown 177.6
2720 Male, age 74, both hemispheres 171.5
1980 Male, age 76, both hemispheres 170.1
2788 Male, age 74, unknown 155.2
2162 Male, age 80, both hemispheres 152.5
Medial olivary nucleus
nTPM: 202.4
1943 Male, age 61, both hemispheres 228.7
1962 Male, age 76, both hemispheres 228.3
2138 Female, age 91, both hemispheres 179.8
2851 Male, age 80, both hemispheres 172.8
Medial parabrachial nucleus
nTPM: 170.0
2170 Female, age 91, both hemispheres 199.6
2786 Male, age 76, both hemispheres 179.8
2854 Male, age 80, both hemispheres 170.2
2463 Female, age 85, right hemisphere 150.5
2156 Male, age 61, both hemispheres 149.6
Medial periolivary nuclei
nTPM: 155.2
2791 Male, age 74, right hemisphere 162.2
2063 Male, age 76, both hemispheres 159.8
2081 Male, age 80, both hemispheres 157.1
2458 Female, age 91, both hemispheres 151.7
2171 Female, age 85, both hemispheres 145.4
Medial vestibular nucleus
nTPM: 171.2
2801 Male, age 74, both hemispheres 191.5
2624 Male, age 61, both hemispheres 186.9
2803 Female, age 91, both hemispheres 179.9
2093 Male, age 80, both hemispheres 168.0
2743 Female, age 85, both hemispheres 157.9
2134 Male, age 76, both hemispheres 143.0
Motor facial nucleus
nTPM: 162.9
2365 Male, age 74, right hemisphere 174.1
2697 Female, age 85, both hemispheres 171.9
2062 Male, age 76, both hemispheres 163.5
2795 Female, age 91, both hemispheres 163.4
2126 Male, age 61, both hemispheres 160.2
2327 Male, age 80, both hemispheres 144.5
Motor hypoglossal nucleus
nTPM: 174.7
2132 Female, age 85, both hemispheres 197.4
2125 Female, age 91, both hemispheres 189.2
2182 Male, age 80, both hemispheres 180.8
2461 Male, age 61, both hemispheres 155.6
2277 Male, age 76, both hemispheres 150.5
Motor trigeminal nucleus
nTPM: 169.4
2321 Female, age 91, both hemispheres 199.2
2560 Male, age 74, both hemispheres 189.0
2309 Male, age 76, both hemispheres 167.4
2335 Male, age 61, both hemispheres 148.0
2079 Male, age 80, both hemispheres 143.2
Nuclei of the trapezoid body
nTPM: 169.4
1983 Male, age 76, both hemispheres 210.4
2159 Male, age 61, both hemispheres 178.8
2166 Male, age 80, both hemispheres 153.9
2368 Female, age 91, both hemispheres 153.6
2735 Female, age 85, both hemispheres 150.2
Nucleus ambiguus
nTPM: 159.3
2071 Male, age 76, both hemispheres 193.0
2096 Female, age 85, both hemispheres 125.7
Nucleus cuneatus
nTPM: 178.3
2564 Male, age 74, both hemispheres 232.5
2380 Male, age 80, both hemispheres 188.5
2808 Female, age 85, both hemispheres 179.7
2100 Male, age 76, both hemispheres 173.0
2805 Female, age 91, both hemispheres 171.0
2131 Male, age 76, both hemispheres 168.3
2376 Male, age 61, both hemispheres 167.7
2381 Male, age 80, both hemispheres 164.3
2562 Male, age 61, both hemispheres 159.8
Nucleus gracilis
nTPM: 191.3
2627 Male, age 74, both hemispheres 225.3
2382 Male, age 80, both hemispheres 179.0
2299 Female, age 85, both hemispheres 169.7
Nucleus raphe magnus
nTPM: 161.7
2160 Male, age 61, both hemispheres 175.0
2328 Male, age 80, both hemispheres 174.6
2455 Male, age 74, both hemispheres 167.2
2051 Male, age 76, both hemispheres 166.4
2459 Female, age 91, both hemispheres 152.8
2172 Female, age 85, both hemispheres 134.4
Nucleus raphe obscurus
nTPM: 193.1
2845 Female, age 85, midline 206.8
2142 Male, age 76, midline 190.4
2800 Male, age 61, midline 182.3
Nucleus raphe pallidus
nTPM: 211.5
1924 Male, age 61, midline 263.1
2145 Male, age 76, midline 203.9
2183 Male, age 80, midline 167.6
Nucleus tractus solitarii
nTPM: 137.0
2144 Female, age 91, right hemisphere 165.7
2191 Female, age 85, both hemispheres 139.3
2656 Male, age 76, both hemispheres 130.8
2307 Male, age 80, both hemispheres 112.2
Paramedian reticular nucleus
nTPM: 168.5
2313 Male, age 61, both hemispheres 187.9
2050 Female, age 85, both hemispheres 165.6
2052 Male, age 76, both hemispheres 163.5
2057 Male, age 80, both hemispheres 156.9
Parvicellular reticular nuclei
nTPM: 165.5
2558 Male, age 74, both hemispheres 171.3
2119 Male, age 80, both hemispheres 165.8
2095 Male, age 76, both hemispheres 159.4
Parvicellular reticular nuclei, medullary
nTPM: 166.6
2091 Female, age 85, both hemispheres 193.3
2189 Female, age 91, both hemispheres 165.0
2181 Male, age 80, left hemisphere 141.5
Pedunculopontine tegmental nucleus
nTPM: 167.6
2334 Male, age 80, both hemispheres 176.7
2338 Male, age 61, both hemispheres 172.3
1921 Female, age 85, both hemispheres 154.0
Peritrigeminal nucleus
nTPM: 200.1
2067 Female, age 85, both hemispheres 238.6
2136 Male, age 76, both hemispheres 187.7
2179 Male, age 61, both hemispheres 174.0
Pontine nuclei
nTPM: 192.4
2109 Female, age 72, unknown 207.0
1968 Male, age 76, left hemisphere 195.8
2454 Male, age 74, left hemisphere 193.6
2115 Male, age 80, left hemisphere 192.5
1863 Male, age 55, unknown 192.4
2319 Female, age 91, both hemispheres 191.2
2727 Male, age 61, right hemisphere 188.1
2787 Female, age 85, both hemispheres 178.7
Pontine raphe nucleus
nTPM: 146.8
2122 Female, age 85, midline 151.5
2853 Male, age 76, midline 142.0
Posteroventral cochlear nucleus
nTPM: 182.1
2341 Male, age 80, both hemispheres 228.6
2135 Female, age 91, both hemispheres 203.5
2371 Male, age 61, both hemispheres 178.7
2070 Male, age 76, both hemispheres 155.0
2752 Female, age 85, both hemispheres 144.7
Prepositus hypoglossal nucleus
nTPM: 162.2
2855 Female, age 85, right hemisphere 179.2
2086 Male, age 80, both hemispheres 145.1
Principal sensory trigeminal nucleus
nTPM: 156.2
2367 Female, age 91, left hemisphere 171.3
2158 Male, age 61, both hemispheres 155.6
2324 Male, age 76, both hemispheres 150.3
2008 Male, age 80, left hemisphere 147.6
Reticular pontine nucleus, caudal
nTPM: 169.9
2092 Male, age 76, both hemispheres 191.8
2559 Male, age 74, both hemispheres 189.0
2457 Female, age 91, both hemispheres 164.1
2332 Male, age 80, right hemisphere 134.7
Reticular pontine nucleus, oral
nTPM: 172.0
1939 Male, age 80, both hemispheres 191.9
2366 Female, age 91, both hemispheres 177.1
2012 Female, age 85, both hemispheres 168.5
2361 Male, age 74, both hemispheres 168.5
2167 Male, age 76, both hemispheres 153.9
Reticulotegmental nucleus
nTPM: 172.7
2452 Male, age 74, both hemispheres 196.0
2322 Female, age 91, both hemispheres 174.5
2333 Male, age 80, both hemispheres 168.6
2325 Male, age 76, both hemispheres 151.7
Spinal trigeminal nucleus, caudal
nTPM: 168.6
2312 Male, age 61, both hemispheres 183.8
2390 Female, age 91, both hemispheres 171.5
2447 Male, age 76, both hemispheres 163.2
2308 Male, age 80, both hemispheres 162.4
2642 Male, age 74, both hemispheres 162.2
Spinal trigeminal nucleus, interpolar
nTPM: 169.3
2625 Male, age 61, both hemispheres 189.1
2033 Male, age 80, both hemispheres 178.4
2389 Female, age 91, both hemispheres 168.6
2066 Male, age 76, right hemisphere 161.1
2386 Female, age 85, both hemispheres 149.3
Spinal trigeminal nucleus, oral
nTPM: 163.8
2737 Female, age 85, both hemispheres 166.8
2164 Male, age 80, both hemispheres 162.8
1978 Male, age 76, both hemispheres 161.8
Spinal vestibular nucleus
nTPM: 177.9
2384 Male, age 74, both hemispheres 216.0
2748 Male, age 76, both hemispheres 180.5
2780 Male, age 80, both hemispheres 177.9
2806 Female, age 85, both hemispheres 171.5
2186 Female, age 91, both hemispheres 165.3
2796 Male, age 61, both hemispheres 156.1
Subcoeruleus area
nTPM: 174.8
2451 Male, age 74, both hemispheres 201.1
2369 Female, age 85, left hemisphere 188.4
1958 Male, age 80, both hemispheres 180.0
2323 Female, age 91, left hemisphere 160.2
2089 Male, age 76, left hemisphere 144.1
Superior olive
nTPM: 181.4
2020 Male, age 76, both hemispheres 193.6
2329 Male, age 80, right hemisphere 181.0
2364 Male, age 74, right hemisphere 179.3
1875 Female, age 85, both hemispheres 176.8
2561 Female, age 91, both hemispheres 176.1
Superior vestibular nucleus
nTPM: 173.1
2015 Male, age 80, both hemispheres 177.7
2061 Male, age 76, both hemispheres 176.6
2383 Male, age 74, both hemispheres 164.8
Ventral medullary reticular nucleus
nTPM: 181.3
2372 Male, age 61, both hemispheres 189.5
2060 Male, age 76, both hemispheres 173.1
Ventral periolivary nuclei
nTPM: 165.6
2023 Male, age 76, both hemispheres 221.1
2165 Male, age 80, both hemispheres 152.8
2794 Female, age 91, left hemisphere 149.2
2130 Female, age 85, both hemispheres 139.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 181.6
1986 Male, age 76, both hemispheres 195.8
2180 Male, age 61, both hemispheres 180.4
2118 Male, age 80, both hemispheres 180.0
2302 Female, age 91, both hemispheres 177.7
2741 Female, age 85, both hemispheres 174.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 168.2
1959 Male, age 76, both hemispheres 182.0
2456 Female, age 91, both hemispheres 173.1
2359 Male, age 61, both hemispheres 166.6
2161 Male, age 80, both hemispheres 166.2
2840 Female, age 85, both hemispheres 161.2
2449 Male, age 74, both hemispheres 160.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 249.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 235.3
FF:10182-103D2 60 years, female 286.6
FF:10165-103B3 76 years, female 184.0
Medulla oblongata
Scaled Tags Per Million: 231.0
FF:10174-103C3 60 years, female 257.2
FF:10038-101F2 18-64 years, mixed 252.8
FF:10155-103A2 76 years, female 183.2
Pons
Scaled Tags Per Million: 249.6
FF:10033-101E6 18-54 years, mixed 249.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 297.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 297.7
Samples: 4

Max nTPM: 347.8
Min nTPM: 248.6
Sample A Female 270.9
Sample B Female 248.6
Sample C Male 323.3
Sample D Male 347.8
Pons
nTPM: 277.5
Samples: 4

Max nTPM: 314.5
Min nTPM: 213.6
Sample A Female 303.1
Sample B Female 213.6
Sample C Male 278.8
Sample D Male 314.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 215.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 215.5
Samples: 4

Max nTPM: 223.3
Min nTPM: 209.7
Sample A Male 209.7
Sample B Male 215.4
Sample C Female 213.5
Sample D Female 223.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.9
68191504 Antisense, RP_041129_01_C10, Mouse strain C57BL/6J (56 days, male) 3.9
Pons
Expression energy: 5.4
68191504 Antisense, RP_041129_01_C10, Mouse strain C57BL/6J (56 days, male) 5.4

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