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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
483.7
nTPM
FANTOM5:
782.7
Scaled Tags Per Million
Pig:
321.8
nTPM
Allen mouse:
10.3
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
483.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 483.7
2188
Female, age 91, both hemispheres
612.7
2301
Female, age 85, both hemispheres
572.9
2090
Male, age 80, both hemispheres
502.1
1984
Male, age 76, both hemispheres
247.2
Dorsal cochlear nucleus nTPM: 361.8
2187
Female, age 91, both hemispheres
446.6
2378
Male, age 80, both hemispheres
434.3
2802
Male, age 74, right hemisphere
330.0
2058
Male, age 76, both hemispheres
321.1
2370
Male, age 61, both hemispheres
276.9
Dorsal tegmental nucleus nTPM: 326.0
2083
Male, age 80, both hemispheres
436.8
2326
Male, age 74, both hemispheres
322.5
1936
Male, age 76, left hemisphere
309.6
2358
Male, age 61, both hemispheres
235.1
Dorsolateral tegmental area nTPM: 316.1
2751
Female, age 85, both hemispheres
501.4
2654
Male, age 80, both hemispheres
378.6
2337
Male, age 61, both hemispheres
344.8
2141
Male, age 76, both hemispheres
178.0
2360
Male, age 74, both hemispheres
177.6
Kolliker-Fuse nucleus nTPM: 414.9
2793
Female, age 91, left hemisphere
671.1
2163
Male, age 80, both hemispheres
344.4
2315
Male, age 76, right hemisphere
229.2
Lateral lemniscal nuclei nTPM: 341.1
2320
Female, age 91, left hemisphere
427.9
2169
Male, age 76, both hemispheres
362.0
2453
Male, age 74, right hemisphere
349.1
2036
Male, age 80, both hemispheres
289.0
2746
Female, age 85, left hemisphere
277.3
Lateral parabrachial nucleus nTPM: 417.4
2792
Male, age 76, both hemispheres
761.8
2013
Male, age 80, both hemispheres
405.9
2790
Male, age 61, both hemispheres
257.9
2139
Female, age 85, right hemisphere
243.9
Lateral vestibular nucleus nTPM: 390.2
2311
Male, age 80, both hemispheres
438.6
2184
Male, age 76, both hemispheres
341.8
Locus coeruleus nTPM: 168.5
2720
Male, age 74, both hemispheres
291.3
2162
Male, age 80, both hemispheres
228.4
2788
Male, age 74, unknown
204.0
2317
Female, age 72, unknown
135.1
2123
Female, age 91, both hemispheres
127.0
2014
Male, age 55, unknown
111.4
1980
Male, age 76, both hemispheres
82.1
Medial parabrachial nucleus nTPM: 396.1
2854
Male, age 80, both hemispheres
522.5
2170
Female, age 91, both hemispheres
461.5
2463
Female, age 85, right hemisphere
360.0
2786
Male, age 76, both hemispheres
356.4
2156
Male, age 61, both hemispheres
280.4
Medial periolivary nuclei nTPM: 356.3
2458
Female, age 91, both hemispheres
492.9
2081
Male, age 80, both hemispheres
390.4
2063
Male, age 76, both hemispheres
348.9
2791
Male, age 74, right hemisphere
317.1
2171
Female, age 85, both hemispheres
232.4
Motor facial nucleus nTPM: 399.2
2697
Female, age 85, both hemispheres
637.7
2365
Male, age 74, right hemisphere
440.9
2126
Male, age 61, both hemispheres
384.3
2795
Female, age 91, both hemispheres
375.3
2327
Male, age 80, both hemispheres
309.3
2062
Male, age 76, both hemispheres
247.6
Motor trigeminal nucleus nTPM: 344.1
2321
Female, age 91, both hemispheres
417.0
2309
Male, age 76, both hemispheres
381.8
2079
Male, age 80, both hemispheres
319.7
2560
Male, age 74, both hemispheres
308.9
2335
Male, age 61, both hemispheres
292.9
Nuclei of the trapezoid body nTPM: 298.7
2166
Male, age 80, both hemispheres
383.8
2368
Female, age 91, both hemispheres
358.2
1983
Male, age 76, both hemispheres
310.2
2159
Male, age 61, both hemispheres
278.5
2735
Female, age 85, both hemispheres
162.8
Nucleus raphe magnus nTPM: 318.0
2328
Male, age 80, both hemispheres
422.9
2051
Male, age 76, both hemispheres
414.9
2459
Female, age 91, both hemispheres
393.8
2455
Male, age 74, both hemispheres
326.3
2172
Female, age 85, both hemispheres
177.2
2160
Male, age 61, both hemispheres
173.2
Paramedian reticular nucleus nTPM: 422.9
2052
Male, age 76, both hemispheres
701.3
2050
Female, age 85, both hemispheres
354.6
2057
Male, age 80, both hemispheres
336.1
2313
Male, age 61, both hemispheres
299.6
Pedunculopontine tegmental nucleus nTPM: 350.0
2338
Male, age 61, both hemispheres
436.0
2334
Male, age 80, both hemispheres
360.4
1921
Female, age 85, both hemispheres
253.7
Pontine nuclei nTPM: 348.7
2454
Male, age 74, left hemisphere
532.2
2319
Female, age 91, both hemispheres
502.7
1968
Male, age 76, left hemisphere
378.5
2109
Female, age 72, unknown
361.7
1863
Male, age 55, unknown
318.0
2115
Male, age 80, left hemisphere
282.5
2727
Male, age 61, right hemisphere
208.8
2787
Female, age 85, both hemispheres
205.6
Pontine raphe nucleus nTPM: 220.7
2122
Female, age 85, midline
223.1
2853
Male, age 76, midline
218.3
Posteroventral cochlear nucleus nTPM: 464.1
2341
Male, age 80, both hemispheres
736.7
2135
Female, age 91, both hemispheres
556.6
2070
Male, age 76, both hemispheres
415.4
2371
Male, age 61, both hemispheres
356.4
2752
Female, age 85, both hemispheres
255.4
Principal sensory trigeminal nucleus nTPM: 346.9
2367
Female, age 91, left hemisphere
579.8
2324
Male, age 76, both hemispheres
344.5
2008
Male, age 80, left hemisphere
269.4
2158
Male, age 61, both hemispheres
194.0
Reticular pontine nucleus, caudal nTPM: 451.0
2457
Female, age 91, both hemispheres
681.9
2092
Male, age 76, both hemispheres
476.5
2559
Male, age 74, both hemispheres
373.2
2332
Male, age 80, right hemisphere
272.3
Reticular pontine nucleus, oral nTPM: 467.8
2366
Female, age 91, both hemispheres
729.9
2167
Male, age 76, both hemispheres
442.5
2361
Male, age 74, both hemispheres
419.5
1939
Male, age 80, both hemispheres
401.0
2012
Female, age 85, both hemispheres
346.2
Reticulotegmental nucleus nTPM: 330.5
2322
Female, age 91, both hemispheres
444.3
2333
Male, age 80, both hemispheres
358.8
2452
Male, age 74, both hemispheres
283.6
2325
Male, age 76, both hemispheres
235.2
Spinal trigeminal nucleus, oral nTPM: 320.7
2164
Male, age 80, both hemispheres
429.2
1978
Male, age 76, both hemispheres
327.8
2737
Female, age 85, both hemispheres
205.2
Subcoeruleus area nTPM: 356.3
2369
Female, age 85, left hemisphere
597.6
1958
Male, age 80, both hemispheres
393.2
2089
Male, age 76, left hemisphere
327.6
2323
Female, age 91, left hemisphere
237.1
2451
Male, age 74, both hemispheres
226.3
Superior olive nTPM: 401.1
2020
Male, age 76, both hemispheres
568.2
2329
Male, age 80, right hemisphere
397.5
2561
Female, age 91, both hemispheres
376.1
2364
Male, age 74, right hemisphere
352.8
1875
Female, age 85, both hemispheres
311.0
Ventral periolivary nuclei nTPM: 375.5
2023
Male, age 76, both hemispheres
627.1
2165
Male, age 80, both hemispheres
355.3
2794
Female, age 91, left hemisphere
291.1
2130
Female, age 85, both hemispheres
228.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 413.7
2840
Female, age 85, both hemispheres
508.6
1959
Male, age 76, both hemispheres
480.0
2359
Male, age 61, both hemispheres
404.0
2456
Female, age 91, both hemispheres
381.2
2161
Male, age 80, both hemispheres
372.4
2449
Male, age 74, both hemispheres
335.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
321.8
Pig sample
Sample description
nTPM
Pons nTPM: 321.8
Samples: 4
Max nTPM: 506.3
Min nTPM: 215.2
Sample A
Female
224.6
Sample B
Female
215.2
Sample C
Male
341.1
Sample D
Male
506.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
