PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:648.4 nTPM
FANTOM5:782.7 Scaled Tags Per Million
Pig:518.9 nTPM
Mouse:188.6 nTPM
Allen mouse:10.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 648.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 483.7
2188 Female, age 91, both hemispheres 612.7
2301 Female, age 85, both hemispheres 572.9
2090 Male, age 80, both hemispheres 502.1
1984 Male, age 76, both hemispheres 247.2
Area postrema
nTPM: 375.9
2306 Male, age 80, both hemispheres 631.9
2799 Male, age 61, both hemispheres 293.0
2054 Male, age 76, both hemispheres 202.8
Dorsal cochlear nucleus
nTPM: 361.8
2187 Female, age 91, both hemispheres 446.6
2378 Male, age 80, both hemispheres 434.3
2802 Male, age 74, right hemisphere 330.0
2058 Male, age 76, both hemispheres 321.1
2370 Male, age 61, both hemispheres 276.9
Dorsal medullary reticular nucleus
nTPM: 398.1
2373 Male, age 61, both hemispheres 439.9
2040 Female, age 85, both hemispheres 381.7
2088 Male, age 76, both hemispheres 372.8
Dorsal motor vagal complex
nTPM: 297.0
2185 Male, age 76, both hemispheres 426.7
2797 Male, age 61, both hemispheres 413.6
2807 Female, age 85, both hemispheres 322.2
2643 Male, age 74, both hemispheres 279.7
2133 Female, age 91, both hemispheres 275.0
2000 Male, age 74, unknown 258.2
2813 Female, age 72, unknown 256.8
2844 Male, age 55, unknown 143.9
Dorsal tegmental nucleus
nTPM: 326.0
2083 Male, age 80, both hemispheres 436.8
2326 Male, age 74, both hemispheres 322.5
1936 Male, age 76, left hemisphere 309.6
2358 Male, age 61, both hemispheres 235.1
Dorsolateral tegmental area
nTPM: 316.1
2751 Female, age 85, both hemispheres 501.4
2654 Male, age 80, both hemispheres 378.6
2337 Male, age 61, both hemispheres 344.8
2141 Male, age 76, both hemispheres 178.0
2360 Male, age 74, both hemispheres 177.6
Gigantocellular reticular nuclei, medullary
nTPM: 409.7
2314 Male, age 61, both hemispheres 715.7
1876 Female, age 85, both hemispheres 460.4
2387 Female, age 91, both hemispheres 458.3
2310 Male, age 80, both hemispheres 330.4
2022 Male, age 76, right hemisphere 310.4
2462 Male, age 74, both hemispheres 183.0
Gigantocellular reticular nuclei, pars
nTPM: 394.6
2336 Male, age 61, both hemispheres 474.2
2330 Male, age 80, both hemispheres 469.5
2706 Male, age 80, both hemispheres 438.3
2084 Female, age 85, both hemispheres 301.2
2168 Male, age 76, both hemispheres 289.6
Inferior olive
nTPM: 465.2
2178 Male, age 61, both hemispheres 559.4
2628 Female, age 91, both hemispheres 549.4
2379 Male, age 80, both hemispheres 436.0
2085 Female, age 85, both hemispheres 431.0
2563 Male, age 74, both hemispheres 350.4
Kolliker-Fuse nucleus
nTPM: 414.9
2793 Female, age 91, left hemisphere 671.1
2163 Male, age 80, both hemispheres 344.4
2315 Male, age 76, right hemisphere 229.2
Lateral lemniscal nuclei
nTPM: 341.1
2320 Female, age 91, left hemisphere 427.9
2169 Male, age 76, both hemispheres 362.0
2453 Male, age 74, right hemisphere 349.1
2036 Male, age 80, both hemispheres 289.0
2746 Female, age 85, left hemisphere 277.3
Lateral medullary reticular nucleus
nTPM: 480.6
2374 Male, age 61, both hemispheres 726.1
2190 Female, age 85, both hemispheres 499.6
2852 Male, age 80, both hemispheres 475.0
2305 Male, age 74, both hemispheres 413.3
2044 Male, age 76, both hemispheres 396.4
2804 Female, age 91, both hemispheres 373.0
Lateral parabrachial nucleus
nTPM: 417.4
2792 Male, age 76, both hemispheres 761.8
2013 Male, age 80, both hemispheres 405.9
2790 Male, age 61, both hemispheres 257.9
2139 Female, age 85, right hemisphere 243.9
Lateral vestibular nucleus
nTPM: 390.2
2311 Male, age 80, both hemispheres 438.6
2184 Male, age 76, both hemispheres 341.8
Locus coeruleus
nTPM: 168.5
2720 Male, age 74, both hemispheres 291.3
2162 Male, age 80, both hemispheres 228.4
2788 Male, age 74, unknown 204.0
2317 Female, age 72, unknown 135.1
2123 Female, age 91, both hemispheres 127.0
2014 Male, age 55, unknown 111.4
1980 Male, age 76, both hemispheres 82.1
Medial olivary nucleus
nTPM: 611.6
1962 Male, age 76, both hemispheres 782.1
1943 Male, age 61, both hemispheres 661.4
2851 Male, age 80, both hemispheres 603.5
2138 Female, age 91, both hemispheres 399.2
Medial parabrachial nucleus
nTPM: 396.1
2854 Male, age 80, both hemispheres 522.5
2170 Female, age 91, both hemispheres 461.5
2463 Female, age 85, right hemisphere 360.0
2786 Male, age 76, both hemispheres 356.4
2156 Male, age 61, both hemispheres 280.4
Medial periolivary nuclei
nTPM: 356.3
2458 Female, age 91, both hemispheres 492.9
2081 Male, age 80, both hemispheres 390.4
2063 Male, age 76, both hemispheres 348.9
2791 Male, age 74, right hemisphere 317.1
2171 Female, age 85, both hemispheres 232.4
Medial vestibular nucleus
nTPM: 384.0
2803 Female, age 91, both hemispheres 554.8
2801 Male, age 74, both hemispheres 461.8
2624 Male, age 61, both hemispheres 456.3
2093 Male, age 80, both hemispheres 429.2
2743 Female, age 85, both hemispheres 235.7
2134 Male, age 76, both hemispheres 166.5
Motor facial nucleus
nTPM: 399.2
2697 Female, age 85, both hemispheres 637.7
2365 Male, age 74, right hemisphere 440.9
2126 Male, age 61, both hemispheres 384.3
2795 Female, age 91, both hemispheres 375.3
2327 Male, age 80, both hemispheres 309.3
2062 Male, age 76, both hemispheres 247.6
Motor hypoglossal nucleus
nTPM: 370.1
2132 Female, age 85, both hemispheres 506.0
2182 Male, age 80, both hemispheres 484.2
2125 Female, age 91, both hemispheres 403.3
2461 Male, age 61, both hemispheres 341.6
2277 Male, age 76, both hemispheres 115.4
Motor trigeminal nucleus
nTPM: 344.1
2321 Female, age 91, both hemispheres 417.0
2309 Male, age 76, both hemispheres 381.8
2079 Male, age 80, both hemispheres 319.7
2560 Male, age 74, both hemispheres 308.9
2335 Male, age 61, both hemispheres 292.9
Nuclei of the trapezoid body
nTPM: 298.7
2166 Male, age 80, both hemispheres 383.8
2368 Female, age 91, both hemispheres 358.2
1983 Male, age 76, both hemispheres 310.2
2159 Male, age 61, both hemispheres 278.5
2735 Female, age 85, both hemispheres 162.8
Nucleus ambiguus
nTPM: 418.7
2071 Male, age 76, both hemispheres 660.8
2096 Female, age 85, both hemispheres 176.7
Nucleus cuneatus
nTPM: 446.7
2381 Male, age 80, both hemispheres 686.3
2808 Female, age 85, both hemispheres 617.3
2380 Male, age 80, both hemispheres 577.5
2100 Male, age 76, both hemispheres 472.7
2376 Male, age 61, both hemispheres 396.9
2805 Female, age 91, both hemispheres 374.6
2131 Male, age 76, both hemispheres 323.3
2564 Male, age 74, both hemispheres 305.7
2562 Male, age 61, both hemispheres 265.8
Nucleus gracilis
nTPM: 603.2
2382 Male, age 80, both hemispheres 896.3
2627 Male, age 74, both hemispheres 470.2
2299 Female, age 85, both hemispheres 443.0
Nucleus raphe magnus
nTPM: 318.0
2328 Male, age 80, both hemispheres 422.9
2051 Male, age 76, both hemispheres 414.9
2459 Female, age 91, both hemispheres 393.8
2455 Male, age 74, both hemispheres 326.3
2172 Female, age 85, both hemispheres 177.2
2160 Male, age 61, both hemispheres 173.2
Nucleus raphe obscurus
nTPM: 648.4
2845 Female, age 85, midline 787.6
2142 Male, age 76, midline 627.9
2800 Male, age 61, midline 529.6
Nucleus raphe pallidus
nTPM: 576.2
2145 Male, age 76, midline 810.6
2183 Male, age 80, midline 459.7
1924 Male, age 61, midline 458.4
Nucleus tractus solitarii
nTPM: 191.0
2144 Female, age 91, right hemisphere 211.0
2307 Male, age 80, both hemispheres 209.4
2191 Female, age 85, both hemispheres 191.9
2656 Male, age 76, both hemispheres 151.8
Paramedian reticular nucleus
nTPM: 422.9
2052 Male, age 76, both hemispheres 701.3
2050 Female, age 85, both hemispheres 354.6
2057 Male, age 80, both hemispheres 336.1
2313 Male, age 61, both hemispheres 299.6
Parvicellular reticular nuclei
nTPM: 369.4
2095 Male, age 76, both hemispheres 511.2
2119 Male, age 80, both hemispheres 373.0
2558 Male, age 74, both hemispheres 224.0
Parvicellular reticular nuclei, medullary
nTPM: 346.7
2189 Female, age 91, both hemispheres 392.0
2181 Male, age 80, left hemisphere 375.1
2091 Female, age 85, both hemispheres 273.1
Pedunculopontine tegmental nucleus
nTPM: 350.0
2338 Male, age 61, both hemispheres 436.0
2334 Male, age 80, both hemispheres 360.4
1921 Female, age 85, both hemispheres 253.7
Peritrigeminal nucleus
nTPM: 412.6
2136 Male, age 76, both hemispheres 467.4
2179 Male, age 61, both hemispheres 406.0
2067 Female, age 85, both hemispheres 364.4
Pontine nuclei
nTPM: 348.7
2454 Male, age 74, left hemisphere 532.2
2319 Female, age 91, both hemispheres 502.7
1968 Male, age 76, left hemisphere 378.5
2109 Female, age 72, unknown 361.7
1863 Male, age 55, unknown 318.0
2115 Male, age 80, left hemisphere 282.5
2727 Male, age 61, right hemisphere 208.8
2787 Female, age 85, both hemispheres 205.6
Pontine raphe nucleus
nTPM: 220.7
2122 Female, age 85, midline 223.1
2853 Male, age 76, midline 218.3
Posteroventral cochlear nucleus
nTPM: 464.1
2341 Male, age 80, both hemispheres 736.7
2135 Female, age 91, both hemispheres 556.6
2070 Male, age 76, both hemispheres 415.4
2371 Male, age 61, both hemispheres 356.4
2752 Female, age 85, both hemispheres 255.4
Prepositus hypoglossal nucleus
nTPM: 371.6
2855 Female, age 85, right hemisphere 505.7
2086 Male, age 80, both hemispheres 237.4
Principal sensory trigeminal nucleus
nTPM: 346.9
2367 Female, age 91, left hemisphere 579.8
2324 Male, age 76, both hemispheres 344.5
2008 Male, age 80, left hemisphere 269.4
2158 Male, age 61, both hemispheres 194.0
Reticular pontine nucleus, caudal
nTPM: 451.0
2457 Female, age 91, both hemispheres 681.9
2092 Male, age 76, both hemispheres 476.5
2559 Male, age 74, both hemispheres 373.2
2332 Male, age 80, right hemisphere 272.3
Reticular pontine nucleus, oral
nTPM: 467.8
2366 Female, age 91, both hemispheres 729.9
2167 Male, age 76, both hemispheres 442.5
2361 Male, age 74, both hemispheres 419.5
1939 Male, age 80, both hemispheres 401.0
2012 Female, age 85, both hemispheres 346.2
Reticulotegmental nucleus
nTPM: 330.5
2322 Female, age 91, both hemispheres 444.3
2333 Male, age 80, both hemispheres 358.8
2452 Male, age 74, both hemispheres 283.6
2325 Male, age 76, both hemispheres 235.2
Spinal trigeminal nucleus, caudal
nTPM: 436.1
2312 Male, age 61, both hemispheres 568.4
2308 Male, age 80, both hemispheres 436.9
2390 Female, age 91, both hemispheres 413.9
2642 Male, age 74, both hemispheres 380.7
2447 Male, age 76, both hemispheres 380.6
Spinal trigeminal nucleus, interpolar
nTPM: 342.6
2389 Female, age 91, both hemispheres 442.8
2386 Female, age 85, both hemispheres 363.8
2033 Male, age 80, both hemispheres 358.0
2625 Male, age 61, both hemispheres 282.9
2066 Male, age 76, right hemisphere 265.7
Spinal trigeminal nucleus, oral
nTPM: 320.7
2164 Male, age 80, both hemispheres 429.2
1978 Male, age 76, both hemispheres 327.8
2737 Female, age 85, both hemispheres 205.2
Spinal vestibular nucleus
nTPM: 427.9
2806 Female, age 85, both hemispheres 537.9
2748 Male, age 76, both hemispheres 491.9
2186 Female, age 91, both hemispheres 429.5
2796 Male, age 61, both hemispheres 408.2
2384 Male, age 74, both hemispheres 363.3
2780 Male, age 80, both hemispheres 336.8
Subcoeruleus area
nTPM: 356.3
2369 Female, age 85, left hemisphere 597.6
1958 Male, age 80, both hemispheres 393.2
2089 Male, age 76, left hemisphere 327.6
2323 Female, age 91, left hemisphere 237.1
2451 Male, age 74, both hemispheres 226.3
Superior olive
nTPM: 401.1
2020 Male, age 76, both hemispheres 568.2
2329 Male, age 80, right hemisphere 397.5
2561 Female, age 91, both hemispheres 376.1
2364 Male, age 74, right hemisphere 352.8
1875 Female, age 85, both hemispheres 311.0
Superior vestibular nucleus
nTPM: 293.5
2015 Male, age 80, both hemispheres 373.6
2383 Male, age 74, both hemispheres 268.2
2061 Male, age 76, both hemispheres 238.8
Ventral medullary reticular nucleus
nTPM: 444.6
2372 Male, age 61, both hemispheres 490.6
2060 Male, age 76, both hemispheres 398.7
Ventral periolivary nuclei
nTPM: 375.5
2023 Male, age 76, both hemispheres 627.1
2165 Male, age 80, both hemispheres 355.3
2794 Female, age 91, left hemisphere 291.1
2130 Female, age 85, both hemispheres 228.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 432.8
2180 Male, age 61, both hemispheres 555.9
2118 Male, age 80, both hemispheres 515.2
1986 Male, age 76, both hemispheres 396.0
2302 Female, age 91, both hemispheres 349.2
2741 Female, age 85, both hemispheres 348.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 413.7
2840 Female, age 85, both hemispheres 508.6
1959 Male, age 76, both hemispheres 480.0
2359 Male, age 61, both hemispheres 404.0
2456 Female, age 91, both hemispheres 381.2
2161 Male, age 80, both hemispheres 372.4
2449 Male, age 74, both hemispheres 335.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 782.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 615.4
FF:10182-103D2 60 years, female 643.7
FF:10165-103B3 76 years, female 587.2
Medulla oblongata
Scaled Tags Per Million: 431.8
FF:10155-103A2 76 years, female 542.1
FF:10038-101F2 18-64 years, mixed 396.4
FF:10174-103C3 60 years, female 357.0
Pons
Scaled Tags Per Million: 782.7
FF:10033-101E6 18-54 years, mixed 782.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 518.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 518.9
Samples: 4

Max nTPM: 667.5
Min nTPM: 334.2
Sample A Female 606.6
Sample B Female 334.2
Sample C Male 467.4
Sample D Male 667.5
Pons
nTPM: 321.8
Samples: 4

Max nTPM: 506.3
Min nTPM: 215.2
Sample A Female 224.6
Sample B Female 215.2
Sample C Male 341.1
Sample D Male 506.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 188.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 188.6
Samples: 4

Max nTPM: 221.8
Min nTPM: 163.9
Sample A Male 163.9
Sample B Male 187.4
Sample C Female 181.3
Sample D Female 221.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 10.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 10.4
69448632 Antisense, RP_050419_02_F04, Mouse strain C57BL/6J (56 days, male) 10.4
Pons
Expression energy: 10.3
69448632 Antisense, RP_050419_02_F04, Mouse strain C57BL/6J (56 days, male) 10.3

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