HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:210.8 nTPM
HPA Brain:236.6 nTPM
GTEx:210.8 nTPM
FANTOM5:191.6 Scaled Tags Per Million
Pig:198.4 nTPM
Mouse:167.7 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003894Antibody HPA005437Antibody CAB001945
Glial cells HighHighHigh
Neuronal cells MediumHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 236.6
Sample id Sample description nTPM
Hippocampus
nTPM: 206.9
2148 Female, age 91, left hemisphere 231.0
2621 Female, age 67, right hemisphere 225.2
1898 Male, age 80, left hemisphere 209.5
1911 Female, age 85, right hemisphere 205.7
1855 Male, age 76, left hemisphere 185.2
2529 Female, age 94, left hemisphere 184.8
Dentate gyrus
nTPM: 210.3
2530 Female, age 94, left hemisphere 255.1
2010 Male, age 76, both hemispheres 226.2
2531 Female, age 67, both hemispheres 222.3
1927 Female, age 91, both hemispheres 189.8
2528 Male, age 74, both hemispheres 188.0
2246 Female, age 85, both hemispheres 180.5
Entorhinal gyrus
nTPM: 231.8
2117 Female, age 91, right hemisphere 296.3
2764 Male, age 80, right hemisphere 255.2
2613 Female, age 94, left hemisphere 231.2
1787 Male, age 76, left hemisphere 208.9
1938 Female, age 85, left hemisphere 202.5
2686 Male, age 75, right hemisphere 196.6
Hippocampus, CA1
nTPM: 187.6
2749 Male, age 80, left hemisphere 212.9
1873 Female, age 85, both hemispheres 200.3
2082 Female, age 91, right hemisphere 180.8
2527 Male, age 74, both hemispheres 180.0
2045 Male, age 76, both hemispheres 164.0
Hippocampus, CA2
nTPM: 213.0
1963 Male, age 80, left hemisphere 254.9
1940 Female, age 85, left hemisphere 229.8
2437 Female, age 94, left hemisphere 220.8
2113 Female, age 91, right hemisphere 194.8
1892 Male, age 76, both hemispheres 189.2
2249 Male, age 74, both hemispheres 188.7
Hippocampus, CA3
nTPM: 186.6
1891 Female, age 85, both hemispheres 237.7
2620 Female, age 94, left hemisphere 217.8
1867 Male, age 76, both hemispheres 196.7
2861 Female, age 67, both hemispheres 173.2
2137 Male, age 80, left hemisphere 163.5
2436 Male, age 74, both hemispheres 130.9
Parahippocampal cortex
nTPM: 200.8
1990 Female, age 91, right hemisphere 238.2
2250 Female, age 67, right hemisphere 230.0
2532 Female, age 72, left hemisphere 218.8
2692 Male, age 74, both hemispheres 213.2
2018 Male, age 76, both hemispheres 210.6
2245 Female, age 91, both hemispheres 195.8
1933 Female, age 85, both hemispheres 195.7
2693 Female, age 94, both hemispheres 188.2
1850 Male, age 80, both hemispheres 175.9
2622 Female, age 67, right hemisphere 141.4
Perirhinal gyrus
nTPM: 175.4
2521 Female, age 94, right hemisphere 223.3
1847 Female, age 91, left hemisphere 181.3
1794 Male, age 80, right hemisphere 175.8
2848 Male, age 76, right hemisphere 152.7
1841 Female, age 85, right hemisphere 144.0
Subiculum
nTPM: 236.6
2042 Male, age 76, both hemispheres 292.8
1901 Male, age 80, both hemispheres 265.7
1977 Female, age 85, both hemispheres 260.8
2619 Male, age 74, both hemispheres 203.0
2438 Female, age 94, left hemisphere 199.9
2729 Female, age 91, right hemisphere 197.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 210.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 210.8
Samples: 197

Max nTPM: 644.9
Min nTPM: 84.2
Std nTPM: 81.2
Median nTPM: 195.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 644.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 499.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 473.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 461.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 447.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 389.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 388.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 386.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 365.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 359.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 349.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 191.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 191.6
FF:10153-102I9 76 years, female 215.1
FF:10169-103B7 60 years, female 168.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 198.4
Pig sample Sample description nTPM
Subiculum
nTPM: 121.6
Samples: 4

Max nTPM: 138.8
Min nTPM: 113.3
Sample A Female 138.8
Sample B Female 119.6
Sample C Male 113.3
Sample D Male 114.6
Dorsal hippocampus
nTPM: 198.4
Samples: 4

Max nTPM: 258.4
Min nTPM: 131.6
Sample A Female 258.4
Sample B Female 182.3
Sample C Male 221.4
Sample D Male 131.6
Entorhinal cortex
nTPM: 126.2
Samples: 4

Max nTPM: 131.4
Min nTPM: 121.6
Sample A Female 121.6
Sample B Female 128.9
Sample C Male 123.0
Sample D Male 131.4
Ventral hippocampus
nTPM: 162.4
Samples: 4

Max nTPM: 207.9
Min nTPM: 110.3
Sample A Female 167.8
Sample B Female 110.3
Sample C Male 163.5
Sample D Male 207.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 167.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 127.1
Samples: 4

Max nTPM: 139.4
Min nTPM: 110.2
Sample A Male 139.4
Sample B Male 130.7
Sample C Female 128.1
Sample D Female 110.2
Hippocampal formation
nTPM: 167.7
Samples: 4

Max nTPM: 191.6
Min nTPM: 148.0
Sample A Male 148.0
Sample B Male 162.8
Sample C Female 191.6
Sample D Female 168.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
69529292 Antisense, RP_050421_03_H11, Mouse strain C57BL/6J (56 days, male) 17.4

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