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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:81.0 nTPM
HPA Brain:407.4 nTPM
GTEx:81.0 nTPM
FANTOM5:660.3 Scaled Tags Per Million
Pig:205.6 nTPM
Mouse:336.6 nTPM
Allen mouse:11.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008209Antibody HPA023483Antibody CAB034434
Glial cells Not detectedLowHigh
Neuronal cells Not detectedLowHigh






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

407.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 207.1
1781 Male, age 74, unknown 306.0
2288 Male, age 75, left hemisphere 229.3
2846 Female, age 79, unknown 221.4
1857 Female, age 85, left hemisphere 214.5
2290 Female, age 72, unknown 196.0
1854 Male, age 80, left hemisphere 185.5
2289 Male, age 61, right hemisphere 159.3
2481 Female, age 94, left hemisphere 144.5
Globus pallidus, externus
nTPM: 95.5
2772 Female, age 79, unknown 150.5
2395 Male, age 75, both hemispheres 106.4
2646 Male, age 61, right hemisphere 96.1
1996 Male, age 80, right hemisphere 66.2
2567 Female, age 72, unknown 58.6
Globus pallidus, internus
nTPM: 88.9
1818 Male, age 74, unknown 132.7
2287 Male, age 75, right hemisphere 110.5
2483 Female, age 94, right hemisphere 105.6
2037 Male, age 80, right hemisphere 78.2
2566 Female, age 72, unknown 75.8
2778 Female, age 91, both hemispheres 67.6
2111 Female, age 85, right hemisphere 52.4
Nucleus accumbens
nTPM: 207.3
1856 Female, age 91, right hemisphere 329.2
1783 Male, age 74, unknown 257.1
2824 Male, age 61, right hemisphere 213.0
2286 Male, age 75, left hemisphere 211.0
2698 Female, age 72, unknown 205.8
1806 Female, age 85, left hemisphere 203.1
2732 Male, age 80, right hemisphere 128.4
2391 Female, age 94, left hemisphere 111.0
Nucleus basalis of Meynert
nTPM: 171.9
2821 Male, age 75, both hemispheres 212.6
2484 Female, age 94, left hemisphere 204.0
2393 Male, age 80, right hemisphere 176.7
2569 Male, age 61, both hemispheres 94.2
Nucleus of the diagonal band
nTPM: 405.2
1812 Female, age 91, both hemispheres 507.5
2775 Male, age 80, right hemisphere 460.1
2195 Female, age 85, both hemispheres 435.4
2029 Male, age 61, right hemisphere 418.1
1979 Male, age 74, unknown 205.2
Putamen
nTPM: 197.8
1838 Male, age 80, right hemisphere 245.2
1937 Female, age 91, right hemisphere 228.1
2466 Female, age 79, unknown 223.7
2647 Male, age 75, left hemisphere 208.7
1829 Male, age 74, unknown 195.1
2489 Female, age 72, unknown 143.8
2482 Female, age 94, left hemisphere 140.0
Septal nuclei
nTPM: 348.4
2031 Female, age 72, unknown 502.7
1960 Male, age 74, unknown 486.2
2009 Female, age 91, both hemispheres 455.9
2629 Female, age 94, right hemisphere 433.5
2059 Female, age 85, both hemispheres 250.1
2394 Male, age 61, left hemisphere 169.0
2199 Male, age 80, right hemisphere 141.6
Stria terminalis, bed nucleus
nTPM: 407.4
1974 Female, age 91, both hemispheres 523.4
2486 Female, age 94, both hemispheres 460.4
2201 Male, age 74, unknown 238.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 59.0
Samples: 246

Max nTPM: 359.2
Min nTPM: 7.1
Std nTPM: 44.5
Median nTPM: 47.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 359.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 180.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 152.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 148.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 147.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 146.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 145.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 141.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 141.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 140.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 140.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 139.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 137.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 136.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 133.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 132.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 131.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 126.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 125.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 125.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 124.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 124.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 123.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 123.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 122.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 122.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 122.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 119.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 119.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 118.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 118.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 115.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 112.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 111.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 110.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 107.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 106.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 104.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 103.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 102.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 102.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 100.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 100.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 99.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 99.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 99.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 97.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 96.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 94.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 94.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 93.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 93.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 92.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 89.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 88.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 87.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 87.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 87.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 87.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 86.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 85.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 84.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 84.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 84.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 84.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 84.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 84.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 82.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 82.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 82.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 80.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 79.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 79.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 78.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 78.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 77.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 76.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 76.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 76.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 76.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 75.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 74.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 73.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 73.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 73.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 72.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 72.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 71.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 70.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 70.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 70.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 68.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 68.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 67.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 66.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 65.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 63.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 63.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 60.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 59.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 58.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 57.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 56.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 56.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 56.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 56.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 54.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 54.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 54.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 54.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 53.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 53.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 53.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 53.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 50.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 48.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 48.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 48.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 46.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 46.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 45.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 45.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 45.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 44.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 43.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 42.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 41.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 41.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 41.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 41.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 41.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 41.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 40.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 39.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 38.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 38.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 37.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 36.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 36.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 36.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 34.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 34.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 33.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 33.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 32.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 32.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 31.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 31.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 31.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 31.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 31.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 31.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 30.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 30.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 30.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 30.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 29.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 29.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 28.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 28.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 28.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 27.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 25.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 25.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 25.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 25.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 24.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 24.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 24.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 24.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 23.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 23.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 23.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 23.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 22.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 22.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 22.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 21.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 21.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 21.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 21.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 21.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 20.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 20.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 20.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 20.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 20.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 20.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 19.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 19.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 19.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 19.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 18.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 18.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 18.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 17.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 17.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 17.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 16.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 16.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 16.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 16.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 16.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 16.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 16.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 15.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 15.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 15.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 15.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 15.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 14.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 14.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 14.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 13.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 13.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 13.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 12.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 12.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 12.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 12.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 12.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 12.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 12.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 12.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 12.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 11.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 11.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 11.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 11.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 10.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 10.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 10.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 8.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 7.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 7.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 81.0
Samples: 246

Max nTPM: 197.9
Min nTPM: 5.3
Std nTPM: 53.7
Median nTPM: 82.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 197.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 195.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 193.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 193.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 191.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 183.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 183.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 182.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 182.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 180.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 177.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 176.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 174.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 172.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 171.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 169.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 168.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 168.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 168.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 167.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 164.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 162.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 161.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 157.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 155.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 154.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 154.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 151.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 150.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 149.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 148.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 148.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 148.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 148.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 147.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 147.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 146.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 145.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 142.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 142.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 141.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 140.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 140.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 139.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 139.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 137.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 137.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 136.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 135.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 135.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 134.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 134.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 132.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 132.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 129.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 129.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 129.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 126.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 125.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 125.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 124.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 121.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 120.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 119.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 117.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 116.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 115.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 115.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 114.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 113.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 113.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 112.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 111.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 111.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 111.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 111.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 111.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 110.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 110.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 108.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 107.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 105.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 105.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 104.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 103.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 102.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 102.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 102.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 102.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 101.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 101.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 101.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 100.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 99.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 98.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 98.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 96.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 95.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 95.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 94.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 94.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 93.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 92.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 91.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 90.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 89.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 89.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 88.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 87.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 87.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 87.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 87.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 85.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 85.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 85.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 85.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 85.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 84.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 84.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 83.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 83.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 83.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 82.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 82.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 81.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 81.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 79.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 79.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 78.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 78.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 76.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 75.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 73.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 70.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 69.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 69.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 69.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 68.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 67.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 67.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 66.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 65.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 65.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 65.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 64.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 63.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 63.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 62.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 58.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 57.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 56.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 54.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 51.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 51.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 50.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 50.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 50.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 49.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 47.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 47.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 46.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 46.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 44.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 42.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 41.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 40.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 40.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 39.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 38.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 37.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 37.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 37.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 37.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 36.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 35.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 34.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 33.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 33.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 32.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 32.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 29.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 28.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 28.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 27.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 27.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 27.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 27.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 27.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 27.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 26.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 26.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 25.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 25.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 25.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 25.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 24.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 23.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 22.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 22.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 21.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 21.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 21.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 21.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 20.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 20.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 20.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 20.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 20.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 19.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 19.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 18.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 18.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 18.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 16.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 14.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 14.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 13.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 13.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 13.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 12.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 12.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 12.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 12.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 12.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 12.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 11.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 10.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 10.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 10.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 10.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 9.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 9.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 9.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 9.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 8.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 8.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 7.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 7.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 6.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 6.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 6.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 5.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 5.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 5.3
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Brain - Putamen (basal ganglia)
Average nTPM: 49.4
Samples: 205

Max nTPM: 153.6
Min nTPM: 5.3
Std nTPM: 37.2
Median nTPM: 35.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 153.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 146.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 137.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 136.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 133.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 131.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 130.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 129.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 129.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 126.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 119.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 116.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 113.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 113.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 113.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 112.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 111.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 108.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 106.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 106.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 103.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 102.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 102.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 101.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 101.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 101.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 100.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 100.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 98.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 98.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 97.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 97.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 97.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 97.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 96.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 93.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 93.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 93.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 93.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 91.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 90.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 88.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 87.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 87.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 84.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 83.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 82.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 81.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 81.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 81.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 79.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 77.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 76.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 73.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 72.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 70.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 68.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 68.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 67.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 66.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 65.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 63.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 62.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 61.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 61.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 61.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 61.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 61.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 60.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 60.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 59.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 57.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 57.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 57.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 56.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 56.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 55.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 55.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 54.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 53.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 53.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 52.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 52.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 48.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 48.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 48.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 47.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 46.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 46.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 45.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 45.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 43.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 43.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 42.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 42.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 40.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 39.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 39.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 39.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 36.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 36.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 35.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 35.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 34.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 34.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 33.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 32.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 32.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 32.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 31.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 30.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 30.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 30.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 29.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 28.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 28.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 28.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 28.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 27.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 27.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 27.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 27.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 27.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 26.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 26.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 26.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 26.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 26.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 26.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 25.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 25.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 25.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 25.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 25.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 25.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 24.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 24.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 23.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 23.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 23.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 23.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 22.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 22.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 21.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 21.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 21.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 20.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 18.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 18.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 18.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 17.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 17.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 17.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 17.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 16.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 16.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 16.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 16.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 16.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 16.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 16.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 15.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 15.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 15.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 15.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 15.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 14.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 14.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 13.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 13.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 13.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 13.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 13.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 13.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 13.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 13.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 13.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 12.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 12.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 11.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 11.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 11.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 11.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 11.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 11.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 11.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 11.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 11.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 11.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 10.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 10.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 9.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 9.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 9.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 9.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 9.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 8.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 7.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 5.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

660.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 252.3
FF:10164-103B2 76 years, female 252.3
Nucleus accumbens
Scaled Tags Per Million: 660.3
FF:10037-101F1 23-56 years, mixed 660.3
Putamen
Scaled Tags Per Million: 380.4
FF:10176-103C5 60 years, female 380.4
Globus pallidus
Scaled Tags Per Million: 155.0
FF:10175-103C4 60 years, female 216.5
FF:10161-103A8 76 years, female 93.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.6
Pig sample Sample description nTPM
Caudate
nTPM: 183.7
Samples: 4

Max nTPM: 204.4
Min nTPM: 169.7
Sample A Female 172.2
Sample B Female 188.5
Sample C Male 204.4
Sample D Male 169.7
Putamen
nTPM: 167.7
Samples: 4

Max nTPM: 198.9
Min nTPM: 131.3
Sample A Female 131.3
Sample B Female 149.8
Sample C Male 198.9
Sample D Male 190.6
Septum
nTPM: 188.7
Samples: 4

Max nTPM: 244.2
Min nTPM: 130.1
Sample A Female 194.3
Sample B Female 186.0
Sample C Male 244.2
Sample D Male 130.1
Ventral pallidum
nTPM: 205.6
Samples: 4

Max nTPM: 275.0
Min nTPM: 165.7
Sample A Female 200.1
Sample B Female 181.6
Sample C Male 275.0
Sample D Male 165.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

336.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 251.4
Samples: 4

Max nTPM: 265.2
Min nTPM: 237.4
Sample A Male 247.6
Sample B Male 237.4
Sample C Female 265.2
Sample D Female 255.3
Septum
nTPM: 272.3
Samples: 4

Max nTPM: 334.8
Min nTPM: 247.7
Sample A Male 334.8
Sample B Male 247.7
Sample C Female 255.5
Sample D Female 251.2
Ventral forebrain
nTPM: 336.6
Samples: 4

Max nTPM: 359.0
Min nTPM: 320.2
Sample A Male 323.0
Sample B Male 359.0
Sample C Female 320.2
Sample D Female 344.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.5
1009 Antisense, RP_040227_01_08, Mouse strain C57BL/6J (56 days, male) 7.5
1010 Antisense, RP_040227_01_08, Mouse strain C57BL/6J (56 days, male) 5.4
Pallidum
Expression energy: 11.1
1009 Antisense, RP_040227_01_08, Mouse strain C57BL/6J (56 days, male) 11.1
1010 Antisense, RP_040227_01_08, Mouse strain C57BL/6J (56 days, male) 8.3

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