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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1091.4 nTPM
HPA Brain:765.8 nTPM
GTEx:1091.4 nTPM
FANTOM5:251.1 Scaled Tags Per Million
Pig:66.7 nTPM
Mouse:943.5 nTPM
Allen mouse:8.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031153Antibody CAB004027
Glial cells MediumLow
Neuronal cells HighHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

765.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 481.7
2846 Female, age 79, unknown 681.8
1857 Female, age 85, left hemisphere 527.2
1854 Male, age 80, left hemisphere 509.1
2290 Female, age 72, unknown 487.3
1781 Male, age 74, unknown 445.5
2288 Male, age 75, left hemisphere 426.0
2481 Female, age 94, left hemisphere 395.4
2289 Male, age 61, right hemisphere 381.3
Globus pallidus, externus
nTPM: 765.8
1996 Male, age 80, right hemisphere 918.4
2395 Male, age 75, both hemispheres 767.6
2646 Male, age 61, right hemisphere 722.5
2567 Female, age 72, unknown 713.7
2772 Female, age 79, unknown 706.5
Globus pallidus, internus
nTPM: 763.5
2483 Female, age 94, right hemisphere 856.4
2037 Male, age 80, right hemisphere 837.6
2287 Male, age 75, right hemisphere 835.6
2566 Female, age 72, unknown 757.3
2778 Female, age 91, both hemispheres 714.7
1818 Male, age 74, unknown 697.8
2111 Female, age 85, right hemisphere 645.0
Nucleus accumbens
nTPM: 513.2
2698 Female, age 72, unknown 717.3
2732 Male, age 80, right hemisphere 556.7
2391 Female, age 94, left hemisphere 537.3
1806 Female, age 85, left hemisphere 502.4
1783 Male, age 74, unknown 501.5
1856 Female, age 91, right hemisphere 491.3
2824 Male, age 61, right hemisphere 405.5
2286 Male, age 75, left hemisphere 393.3
Nucleus basalis of Meynert
nTPM: 608.2
2569 Male, age 61, both hemispheres 802.3
2821 Male, age 75, both hemispheres 586.6
2393 Male, age 80, right hemisphere 542.5
2484 Female, age 94, left hemisphere 501.6
Nucleus of the diagonal band
nTPM: 382.2
1812 Female, age 91, both hemispheres 494.1
1979 Male, age 74, unknown 392.8
2775 Male, age 80, right hemisphere 358.2
2195 Female, age 85, both hemispheres 340.7
2029 Male, age 61, right hemisphere 325.0
Putamen
nTPM: 471.4
2647 Male, age 75, left hemisphere 515.4
1829 Male, age 74, unknown 494.7
1937 Female, age 91, right hemisphere 478.0
2489 Female, age 72, unknown 468.5
2466 Female, age 79, unknown 457.2
2482 Female, age 94, left hemisphere 451.3
1838 Male, age 80, right hemisphere 434.6
Septal nuclei
nTPM: 416.3
2199 Male, age 80, right hemisphere 498.4
2394 Male, age 61, left hemisphere 482.1
2629 Female, age 94, right hemisphere 406.2
2031 Female, age 72, unknown 405.1
2009 Female, age 91, both hemispheres 394.6
2059 Female, age 85, both hemispheres 365.7
1960 Male, age 74, unknown 362.2
Stria terminalis, bed nucleus
nTPM: 345.7
1974 Female, age 91, both hemispheres 410.5
2201 Male, age 74, unknown 359.4
2486 Female, age 94, both hemispheres 267.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1091.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 951.7
Samples: 246

Max nTPM: 2391.4
Min nTPM: 401.0
Std nTPM: 289.2
Median nTPM: 885.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2391.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2144.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2073.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1844.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1799.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1777.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1668.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1668.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1642.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1607.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1605.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1439.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1435.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1413.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1405.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1387.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1360.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1359.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1354.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1342.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1340.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1322.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1321.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1306.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1292.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1283.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1281.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1268.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1263.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1260.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1245.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1242.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1236.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1235.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1226.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1215.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1212.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1203.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1198.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1177.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1167.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1167.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1166.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1166.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1155.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1154.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1149.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1144.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1142.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1142.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1139.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1130.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1127.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1125.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1124.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1122.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1121.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1118.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1112.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1110.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1108.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1107.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1105.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1102.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1097.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1088.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1086.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1080.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1077.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1070.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1070.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1066.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1065.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1060.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1048.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1046.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1030.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1030.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1030.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1023.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1021.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1016.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1014.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1009.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1005.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1002.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1001.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 997.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 994.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 994.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 993.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 985.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 980.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 974.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 973.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 966.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 959.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 959.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 955.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 952.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 949.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 943.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 942.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 934.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 932.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 931.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 931.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 930.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 930.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 921.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 920.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 914.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 909.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 907.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 906.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 906.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 902.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 899.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 899.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 895.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 894.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 890.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 886.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 884.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 878.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 878.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 877.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 874.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 868.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 864.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 860.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 858.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 857.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 853.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 852.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 850.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 849.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 848.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 844.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 843.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 843.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 843.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 842.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 840.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 837.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 837.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 836.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 835.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 834.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 833.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 832.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 832.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 827.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 826.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 825.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 821.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 821.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 820.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 820.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 820.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 816.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 811.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 811.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 811.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 807.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 803.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 802.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 801.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 800.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 793.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 786.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 780.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 775.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 775.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 775.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 772.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 771.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 771.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 766.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 766.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 765.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 764.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 760.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 754.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 753.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 753.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 749.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 747.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 743.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 743.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 741.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 741.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 739.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 738.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 735.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 722.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 721.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 718.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 716.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 715.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 713.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 710.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 707.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 704.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 703.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 703.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 694.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 694.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 686.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 685.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 684.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 683.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 683.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 681.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 679.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 677.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 677.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 676.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 674.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 667.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 667.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 662.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 660.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 656.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 646.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 642.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 636.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 623.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 615.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 613.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 611.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 609.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 607.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 602.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 601.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 594.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 592.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 586.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 578.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 567.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 564.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 564.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 562.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 554.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 519.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 401.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1091.4
Samples: 246

Max nTPM: 3551.3
Min nTPM: 499.0
Std nTPM: 406.0
Median nTPM: 1018.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 3551.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2831.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2743.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 2494.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 2384.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 2056.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 2004.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1962.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1929.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1884.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1865.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1835.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1830.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1812.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1798.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1793.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1788.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1725.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1713.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1691.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1672.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1640.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1625.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1616.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1613.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1608.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1522.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1514.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1507.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1504.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1448.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1441.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1440.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1428.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1426.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1419.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1418.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 1406.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1404.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1389.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1377.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1376.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1353.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1353.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1351.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1321.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1317.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1309.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1305.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1299.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1289.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1279.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1270.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1269.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1266.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1265.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1264.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1261.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1256.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1242.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1241.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1238.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1233.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1228.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1227.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1225.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1223.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1221.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1200.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 1199.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1192.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1190.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1187.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1185.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1184.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1173.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1167.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 1163.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1159.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 1154.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1147.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1139.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1139.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1133.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1131.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1128.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1127.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1125.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1124.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1123.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1118.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 1117.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1116.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1115.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1110.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1108.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1105.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1104.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1098.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1086.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 1082.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1079.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1077.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1073.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1072.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 1068.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 1068.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1066.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1063.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1058.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 1054.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1053.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 1053.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 1049.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1046.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1043.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1040.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 1038.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 1036.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 1032.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1028.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1019.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 1019.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1018.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1017.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1015.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1008.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1003.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1000.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 997.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 997.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 989.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 987.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 985.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 980.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 973.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 972.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 972.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 966.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 964.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 963.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 960.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 956.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 956.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 955.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 953.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 952.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 951.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 948.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 948.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 942.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 940.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 935.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 934.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 929.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 919.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 919.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 918.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 910.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 901.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 899.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 898.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 894.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 890.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 886.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 883.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 878.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 875.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 870.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 869.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 867.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 865.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 862.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 856.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 856.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 852.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 847.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 847.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 846.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 845.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 843.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 842.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 842.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 839.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 837.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 835.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 834.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 832.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 832.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 828.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 827.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 820.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 818.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 810.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 803.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 800.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 794.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 775.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 772.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 772.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 763.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 756.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 754.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 748.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 747.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 741.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 740.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 739.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 733.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 727.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 725.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 724.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 721.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 717.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 710.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 705.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 703.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 697.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 696.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 695.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 692.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 685.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 684.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 678.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 670.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 664.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 664.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 662.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 655.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 650.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 646.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 643.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 641.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 623.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 623.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 620.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 609.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 606.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 605.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 602.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 598.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 541.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 529.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 517.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 514.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 499.0
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Brain - Putamen (basal ganglia)
Average nTPM: 1082.7
Samples: 205

Max nTPM: 2867.2
Min nTPM: 562.9
Std nTPM: 361.2
Median nTPM: 1001.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2867.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2828.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2387.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2236.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1986.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1971.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1939.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1891.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1832.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1784.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1716.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1705.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1690.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1682.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1643.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1622.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1614.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1599.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1533.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1528.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1526.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1515.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1512.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1508.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1481.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1463.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1462.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1440.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1434.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1415.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1404.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1393.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1388.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1366.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1334.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1318.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1317.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1312.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1286.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1276.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1273.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1269.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1269.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1253.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1250.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1250.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1250.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1233.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1233.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1220.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1217.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1216.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1212.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 1209.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1207.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1206.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1198.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1186.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1184.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1168.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1167.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1164.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1158.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1156.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1150.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1144.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1137.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1137.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1136.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1135.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1134.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1132.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1130.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1118.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1110.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1106.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1106.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1101.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1082.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1076.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1075.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1071.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1068.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1061.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1060.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1056.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1050.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1046.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1042.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1037.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1031.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1029.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1026.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1019.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1018.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1017.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1016.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1014.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1011.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1009.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1005.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1004.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1001.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 999.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 995.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 993.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 988.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 981.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 981.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 977.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 976.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 975.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 970.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 968.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 965.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 963.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 961.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 959.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 956.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 952.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 952.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 948.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 947.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 944.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 938.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 937.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 936.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 936.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 933.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 923.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 920.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 902.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 894.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 891.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 890.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 888.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 885.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 884.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 882.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 880.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 877.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 874.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 874.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 868.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 865.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 864.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 863.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 862.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 860.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 858.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 853.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 848.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 848.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 847.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 847.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 845.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 841.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 840.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 835.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 834.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 828.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 817.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 807.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 804.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 802.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 798.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 797.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 796.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 793.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 789.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 788.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 787.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 783.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 781.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 776.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 771.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 764.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 759.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 750.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 749.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 736.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 733.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 728.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 726.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 725.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 725.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 724.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 719.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 718.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 712.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 708.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 699.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 697.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 695.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 687.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 684.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 679.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 671.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 658.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 653.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 631.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 623.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 620.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 593.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 562.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

251.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 128.6
FF:10164-103B2 76 years, female 128.6
Nucleus accumbens
Scaled Tags Per Million: 97.9
FF:10037-101F1 23-56 years, mixed 97.9
Putamen
Scaled Tags Per Million: 239.2
FF:10176-103C5 60 years, female 239.2
Globus pallidus
Scaled Tags Per Million: 251.1
FF:10175-103C4 60 years, female 311.5
FF:10161-103A8 76 years, female 190.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.7
Pig sample Sample description nTPM
Caudate
nTPM: 49.2
Samples: 4

Max nTPM: 53.9
Min nTPM: 42.9
Sample A Female 53.9
Sample B Female 49.2
Sample C Male 50.7
Sample D Male 42.9
Putamen
nTPM: 64.0
Samples: 4

Max nTPM: 72.5
Min nTPM: 50.7
Sample A Female 72.5
Sample B Female 50.7
Sample C Male 72.4
Sample D Male 60.2
Septum
nTPM: 66.8
Samples: 4

Max nTPM: 78.5
Min nTPM: 58.4
Sample A Female 78.5
Sample B Female 61.1
Sample C Male 69.0
Sample D Male 58.4
Ventral pallidum
nTPM: 58.5
Samples: 4

Max nTPM: 67.8
Min nTPM: 51.7
Sample A Female 51.7
Sample B Female 67.8
Sample C Male 54.3
Sample D Male 60.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

943.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 857.3
Samples: 4

Max nTPM: 916.2
Min nTPM: 814.6
Sample A Male 814.6
Sample B Male 838.8
Sample C Female 859.5
Sample D Female 916.2
Septum
nTPM: 943.5
Samples: 4

Max nTPM: 1095.2
Min nTPM: 829.5
Sample A Male 829.5
Sample B Male 1095.2
Sample C Female 978.6
Sample D Female 870.8
Ventral forebrain
nTPM: 804.0
Samples: 4

Max nTPM: 926.3
Min nTPM: 734.5
Sample A Male 734.5
Sample B Male 815.6
Sample C Female 926.3
Sample D Female 739.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.7
69873301 Antisense, RP_050512_01_A01, Mouse strain C57BL/6J (56 days, male) 7.7
Pallidum
Expression energy: 8.6
69873301 Antisense, RP_050512_01_A01, Mouse strain C57BL/6J (56 days, male) 8.6

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