PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:790.0 nTPM
FANTOM5:232.1 Scaled Tags Per Million
Pig:74.8 nTPM
Mouse:1059.6 nTPM
Allen mouse:10.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 790.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 654.2
2301 Female, age 85, both hemispheres 722.7
2188 Female, age 91, both hemispheres 722.0
2090 Male, age 80, both hemispheres 699.6
1984 Male, age 76, both hemispheres 472.5
Area postrema
nTPM: 700.8
2799 Male, age 61, both hemispheres 852.2
2306 Male, age 80, both hemispheres 711.9
2054 Male, age 76, both hemispheres 538.4
Dorsal cochlear nucleus
nTPM: 647.4
2378 Male, age 80, both hemispheres 701.7
2187 Female, age 91, both hemispheres 700.3
2802 Male, age 74, right hemisphere 700.2
2370 Male, age 61, both hemispheres 600.2
2058 Male, age 76, both hemispheres 534.9
Dorsal medullary reticular nucleus
nTPM: 573.0
2373 Male, age 61, both hemispheres 623.4
2040 Female, age 85, both hemispheres 571.4
2088 Male, age 76, both hemispheres 524.1
Dorsal motor vagal complex
nTPM: 642.5
2797 Male, age 61, both hemispheres 1054.1
2807 Female, age 85, both hemispheres 746.2
2643 Male, age 74, both hemispheres 663.5
2000 Male, age 74, unknown 554.7
2813 Female, age 72, unknown 552.7
2133 Female, age 91, both hemispheres 539.5
2185 Male, age 76, both hemispheres 530.9
2844 Male, age 55, unknown 498.1
Dorsal tegmental nucleus
nTPM: 620.2
2358 Male, age 61, both hemispheres 662.0
2326 Male, age 74, both hemispheres 651.6
2083 Male, age 80, both hemispheres 613.1
1936 Male, age 76, left hemisphere 554.1
Dorsolateral tegmental area
nTPM: 594.0
2337 Male, age 61, both hemispheres 717.7
2654 Male, age 80, both hemispheres 709.7
2751 Female, age 85, both hemispheres 553.5
2360 Male, age 74, both hemispheres 524.5
2141 Male, age 76, both hemispheres 464.5
Gigantocellular reticular nuclei, medullary
nTPM: 583.8
2314 Male, age 61, both hemispheres 739.5
2387 Female, age 91, both hemispheres 693.2
2310 Male, age 80, both hemispheres 557.0
1876 Female, age 85, both hemispheres 546.6
2022 Male, age 76, right hemisphere 538.7
2462 Male, age 74, both hemispheres 427.5
Gigantocellular reticular nuclei, pars
nTPM: 538.6
2706 Male, age 80, both hemispheres 592.8
2336 Male, age 61, both hemispheres 542.0
2084 Female, age 85, both hemispheres 535.0
2330 Male, age 80, both hemispheres 533.3
2168 Male, age 76, both hemispheres 489.7
Inferior olive
nTPM: 693.5
2628 Female, age 91, both hemispheres 792.7
2379 Male, age 80, both hemispheres 753.2
2178 Male, age 61, both hemispheres 663.2
2085 Female, age 85, both hemispheres 632.1
2563 Male, age 74, both hemispheres 626.2
Kolliker-Fuse nucleus
nTPM: 638.2
2793 Female, age 91, left hemisphere 726.2
2315 Male, age 76, right hemisphere 640.1
2163 Male, age 80, both hemispheres 548.5
Lateral lemniscal nuclei
nTPM: 505.2
2320 Female, age 91, left hemisphere 547.9
2169 Male, age 76, both hemispheres 547.5
2746 Female, age 85, left hemisphere 529.0
2453 Male, age 74, right hemisphere 460.1
2036 Male, age 80, both hemispheres 441.3
Lateral medullary reticular nucleus
nTPM: 673.5
2852 Male, age 80, both hemispheres 766.1
2804 Female, age 91, both hemispheres 709.5
2190 Female, age 85, both hemispheres 683.7
2374 Male, age 61, both hemispheres 660.6
2305 Male, age 74, both hemispheres 615.4
2044 Male, age 76, both hemispheres 605.5
Lateral parabrachial nucleus
nTPM: 669.0
2792 Male, age 76, both hemispheres 898.0
2013 Male, age 80, both hemispheres 707.4
2139 Female, age 85, right hemisphere 538.2
2790 Male, age 61, both hemispheres 532.3
Lateral vestibular nucleus
nTPM: 585.4
2311 Male, age 80, both hemispheres 701.3
2184 Male, age 76, both hemispheres 469.6
Locus coeruleus
nTPM: 468.2
2720 Male, age 74, both hemispheres 621.3
2162 Male, age 80, both hemispheres 516.0
2123 Female, age 91, both hemispheres 483.7
2317 Female, age 72, unknown 428.2
2788 Male, age 74, unknown 423.6
2014 Male, age 55, unknown 423.3
1980 Male, age 76, both hemispheres 381.3
Medial olivary nucleus
nTPM: 790.0
1962 Male, age 76, both hemispheres 854.7
1943 Male, age 61, both hemispheres 845.0
2851 Male, age 80, both hemispheres 770.8
2138 Female, age 91, both hemispheres 689.6
Medial parabrachial nucleus
nTPM: 604.0
2170 Female, age 91, both hemispheres 750.2
2854 Male, age 80, both hemispheres 670.2
2463 Female, age 85, right hemisphere 540.5
2156 Male, age 61, both hemispheres 530.4
2786 Male, age 76, both hemispheres 528.4
Medial periolivary nuclei
nTPM: 541.8
2081 Male, age 80, both hemispheres 613.9
2458 Female, age 91, both hemispheres 594.5
2063 Male, age 76, both hemispheres 576.9
2791 Male, age 74, right hemisphere 466.1
2171 Female, age 85, both hemispheres 457.3
Medial vestibular nucleus
nTPM: 578.5
2624 Male, age 61, both hemispheres 687.6
2803 Female, age 91, both hemispheres 683.5
2801 Male, age 74, both hemispheres 609.4
2093 Male, age 80, both hemispheres 533.0
2743 Female, age 85, both hemispheres 516.0
2134 Male, age 76, both hemispheres 441.7
Motor facial nucleus
nTPM: 558.9
2697 Female, age 85, both hemispheres 642.4
2795 Female, age 91, both hemispheres 610.7
2126 Male, age 61, both hemispheres 575.0
2062 Male, age 76, both hemispheres 543.4
2365 Male, age 74, right hemisphere 514.2
2327 Male, age 80, both hemispheres 467.5
Motor hypoglossal nucleus
nTPM: 574.6
2182 Male, age 80, both hemispheres 720.3
2132 Female, age 85, both hemispheres 655.5
2125 Female, age 91, both hemispheres 585.0
2461 Male, age 61, both hemispheres 485.2
2277 Male, age 76, both hemispheres 426.9
Motor trigeminal nucleus
nTPM: 550.4
2321 Female, age 91, both hemispheres 629.3
2335 Male, age 61, both hemispheres 554.9
2560 Male, age 74, both hemispheres 546.5
2309 Male, age 76, both hemispheres 527.6
2079 Male, age 80, both hemispheres 493.7
Nuclei of the trapezoid body
nTPM: 539.7
1983 Male, age 76, both hemispheres 650.1
2166 Male, age 80, both hemispheres 577.6
2159 Male, age 61, both hemispheres 517.8
2368 Female, age 91, both hemispheres 508.1
2735 Female, age 85, both hemispheres 444.8
Nucleus ambiguus
nTPM: 591.0
2071 Male, age 76, both hemispheres 732.3
2096 Female, age 85, both hemispheres 449.6
Nucleus cuneatus
nTPM: 639.2
2380 Male, age 80, both hemispheres 783.9
2808 Female, age 85, both hemispheres 782.9
2805 Female, age 91, both hemispheres 738.3
2381 Male, age 80, both hemispheres 688.2
2376 Male, age 61, both hemispheres 639.2
2562 Male, age 61, both hemispheres 617.1
2564 Male, age 74, both hemispheres 600.9
2100 Male, age 76, both hemispheres 475.7
2131 Male, age 76, both hemispheres 426.6
Nucleus gracilis
nTPM: 746.3
2382 Male, age 80, both hemispheres 842.0
2299 Female, age 85, both hemispheres 708.9
2627 Male, age 74, both hemispheres 688.1
Nucleus raphe magnus
nTPM: 511.2
2051 Male, age 76, both hemispheres 620.6
2459 Female, age 91, both hemispheres 586.3
2328 Male, age 80, both hemispheres 508.8
2172 Female, age 85, both hemispheres 470.1
2455 Male, age 74, both hemispheres 445.6
2160 Male, age 61, both hemispheres 435.8
Nucleus raphe obscurus
nTPM: 746.1
2142 Male, age 76, midline 787.8
2845 Female, age 85, midline 764.5
2800 Male, age 61, midline 686.2
Nucleus raphe pallidus
nTPM: 727.1
2145 Male, age 76, midline 754.4
1924 Male, age 61, midline 751.5
2183 Male, age 80, midline 675.3
Nucleus tractus solitarii
nTPM: 520.9
2191 Female, age 85, both hemispheres 609.5
2144 Female, age 91, right hemisphere 578.5
2656 Male, age 76, both hemispheres 467.0
2307 Male, age 80, both hemispheres 428.7
Paramedian reticular nucleus
nTPM: 586.0
2052 Male, age 76, both hemispheres 691.4
2050 Female, age 85, both hemispheres 569.8
2057 Male, age 80, both hemispheres 545.5
2313 Male, age 61, both hemispheres 537.3
Parvicellular reticular nuclei
nTPM: 554.2
2095 Male, age 76, both hemispheres 602.9
2119 Male, age 80, both hemispheres 562.2
2558 Male, age 74, both hemispheres 497.6
Parvicellular reticular nuclei, medullary
nTPM: 533.2
2189 Female, age 91, both hemispheres 553.8
2181 Male, age 80, left hemisphere 536.3
2091 Female, age 85, both hemispheres 509.5
Pedunculopontine tegmental nucleus
nTPM: 571.9
2338 Male, age 61, both hemispheres 662.8
2334 Male, age 80, both hemispheres 620.9
1921 Female, age 85, both hemispheres 432.1
Peritrigeminal nucleus
nTPM: 620.8
2067 Female, age 85, both hemispheres 676.4
2136 Male, age 76, both hemispheres 641.5
2179 Male, age 61, both hemispheres 544.5
Pontine nuclei
nTPM: 544.8
2319 Female, age 91, both hemispheres 671.7
1968 Male, age 76, left hemisphere 596.6
2115 Male, age 80, left hemisphere 586.2
1863 Male, age 55, unknown 545.8
2454 Male, age 74, left hemisphere 545.8
2109 Female, age 72, unknown 509.0
2787 Female, age 85, both hemispheres 453.4
2727 Male, age 61, right hemisphere 449.7
Pontine raphe nucleus
nTPM: 495.5
2853 Male, age 76, midline 496.0
2122 Female, age 85, midline 495.0
Posteroventral cochlear nucleus
nTPM: 676.6
2341 Male, age 80, both hemispheres 820.3
2135 Female, age 91, both hemispheres 784.0
2371 Male, age 61, both hemispheres 720.6
2752 Female, age 85, both hemispheres 540.8
2070 Male, age 76, both hemispheres 517.4
Prepositus hypoglossal nucleus
nTPM: 600.4
2855 Female, age 85, right hemisphere 639.9
2086 Male, age 80, both hemispheres 560.9
Principal sensory trigeminal nucleus
nTPM: 517.1
2367 Female, age 91, left hemisphere 606.9
2324 Male, age 76, both hemispheres 517.1
2158 Male, age 61, both hemispheres 478.1
2008 Male, age 80, left hemisphere 466.3
Reticular pontine nucleus, caudal
nTPM: 557.3
2457 Female, age 91, both hemispheres 604.8
2559 Male, age 74, both hemispheres 602.2
2092 Male, age 76, both hemispheres 587.0
2332 Male, age 80, right hemisphere 435.2
Reticular pontine nucleus, oral
nTPM: 557.3
2366 Female, age 91, both hemispheres 668.5
1939 Male, age 80, both hemispheres 584.5
2167 Male, age 76, both hemispheres 558.8
2012 Female, age 85, both hemispheres 504.9
2361 Male, age 74, both hemispheres 469.7
Reticulotegmental nucleus
nTPM: 579.8
2452 Male, age 74, both hemispheres 633.1
2322 Female, age 91, both hemispheres 622.1
2333 Male, age 80, both hemispheres 561.1
2325 Male, age 76, both hemispheres 502.9
Spinal trigeminal nucleus, caudal
nTPM: 565.4
2312 Male, age 61, both hemispheres 595.7
2308 Male, age 80, both hemispheres 586.6
2642 Male, age 74, both hemispheres 578.1
2390 Female, age 91, both hemispheres 565.1
2447 Male, age 76, both hemispheres 501.7
Spinal trigeminal nucleus, interpolar
nTPM: 594.9
2033 Male, age 80, both hemispheres 680.6
2389 Female, age 91, both hemispheres 632.1
2386 Female, age 85, both hemispheres 600.6
2625 Male, age 61, both hemispheres 563.5
2066 Male, age 76, right hemisphere 497.5
Spinal trigeminal nucleus, oral
nTPM: 486.5
2164 Male, age 80, both hemispheres 557.5
1978 Male, age 76, both hemispheres 487.7
2737 Female, age 85, both hemispheres 414.2
Spinal vestibular nucleus
nTPM: 667.7
2384 Male, age 74, both hemispheres 777.1
2796 Male, age 61, both hemispheres 744.2
2806 Female, age 85, both hemispheres 690.6
2780 Male, age 80, both hemispheres 645.4
2748 Male, age 76, both hemispheres 597.8
2186 Female, age 91, both hemispheres 551.4
Subcoeruleus area
nTPM: 550.3
2369 Female, age 85, left hemisphere 626.9
2451 Male, age 74, both hemispheres 615.4
1958 Male, age 80, both hemispheres 542.9
2089 Male, age 76, left hemisphere 488.8
2323 Female, age 91, left hemisphere 477.4
Superior olive
nTPM: 567.9
2020 Male, age 76, both hemispheres 687.2
2561 Female, age 91, both hemispheres 650.4
2329 Male, age 80, right hemisphere 521.9
1875 Female, age 85, both hemispheres 490.2
2364 Male, age 74, right hemisphere 490.0
Superior vestibular nucleus
nTPM: 626.4
2015 Male, age 80, both hemispheres 681.3
2383 Male, age 74, both hemispheres 649.7
2061 Male, age 76, both hemispheres 548.3
Ventral medullary reticular nucleus
nTPM: 598.0
2372 Male, age 61, both hemispheres 676.5
2060 Male, age 76, both hemispheres 519.5
Ventral periolivary nuclei
nTPM: 563.1
2023 Male, age 76, both hemispheres 677.5
2794 Female, age 91, left hemisphere 600.4
2165 Male, age 80, both hemispheres 510.0
2130 Female, age 85, both hemispheres 464.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 632.2
2118 Male, age 80, both hemispheres 742.1
2302 Female, age 91, both hemispheres 675.7
1986 Male, age 76, both hemispheres 587.0
2180 Male, age 61, both hemispheres 586.5
2741 Female, age 85, both hemispheres 569.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 547.0
2840 Female, age 85, both hemispheres 599.0
2161 Male, age 80, both hemispheres 584.5
1959 Male, age 76, both hemispheres 579.8
2456 Female, age 91, both hemispheres 545.5
2359 Male, age 61, both hemispheres 541.2
2449 Male, age 74, both hemispheres 431.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 232.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 232.1
FF:10182-103D2 60 years, female 289.0
FF:10165-103B3 76 years, female 175.2
Medulla oblongata
Scaled Tags Per Million: 194.5
FF:10174-103C3 60 years, female 303.9
FF:10155-103A2 76 years, female 160.3
FF:10038-101F2 18-64 years, mixed 119.2
Pons
Scaled Tags Per Million: 111.3
FF:10033-101E6 18-54 years, mixed 111.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 74.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 74.7
Samples: 4

Max nTPM: 88.7
Min nTPM: 65.4
Sample A Female 65.4
Sample B Female 65.9
Sample C Male 78.6
Sample D Male 88.7
Pons
nTPM: 74.8
Samples: 4

Max nTPM: 84.4
Min nTPM: 60.2
Sample A Female 72.6
Sample B Female 60.2
Sample C Male 84.4
Sample D Male 81.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1059.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1059.6
Samples: 4

Max nTPM: 1099.2
Min nTPM: 1037.7
Sample A Male 1061.6
Sample B Male 1039.8
Sample C Female 1037.7
Sample D Female 1099.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 10.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.9
69873301 Antisense, RP_050512_01_A01, Mouse strain C57BL/6J (56 days, male) 9.9
Pons
Expression energy: 10.2
69873301 Antisense, RP_050512_01_A01, Mouse strain C57BL/6J (56 days, male) 10.2

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