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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:210.5 nTPM
FANTOM5:124.9 Scaled Tags Per Million
Pig:179.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA015971
Glial cells Medium
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 210.5
Samples: 246

Max nTPM: 444.6
Min nTPM: 104.6
Std nTPM: 51.5
Median nTPM: 206.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 444.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 407.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 360.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 351.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 329.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 322.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 313.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 306.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 304.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 299.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 297.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 296.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 295.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 293.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 291.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 291.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 289.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 289.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 289.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 287.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 287.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 284.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 284.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 283.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 280.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 280.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 276.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 275.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 274.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 273.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 271.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 271.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 271.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 269.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 268.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 266.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 265.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 262.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 261.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 261.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 257.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 257.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 256.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 256.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 255.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 255.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 255.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 252.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 251.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 250.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 249.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 249.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 247.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 247.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 246.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 246.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 245.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 245.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 245.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 244.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 242.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 240.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 240.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 239.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 239.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 239.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 238.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 238.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 238.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 237.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 237.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 236.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 236.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 233.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 233.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 231.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 231.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 229.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 228.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 227.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 226.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 226.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 226.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 226.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 225.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 223.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 223.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 222.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 222.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 222.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 221.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 221.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 220.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 219.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 219.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 218.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 218.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 217.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 217.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 216.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 216.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 216.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 216.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 215.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 215.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 215.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 214.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 214.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 214.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 213.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 213.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 212.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 212.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 211.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 208.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 208.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 208.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 208.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 207.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 207.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 207.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 206.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 206.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 205.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 204.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 203.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 202.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 201.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 200.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 200.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 199.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 198.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 197.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 196.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 195.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 195.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 195.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 194.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 194.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 193.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 192.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 192.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 191.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 191.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 190.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 190.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 190.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 190.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 189.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 189.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 188.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 188.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 188.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 187.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 186.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 186.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 185.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 184.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 184.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 183.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 183.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 183.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 183.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 182.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 181.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 181.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 181.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 181.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 181.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 180.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 180.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 179.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 179.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 178.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 177.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 177.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 176.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 176.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 176.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 176.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 175.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 175.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 175.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 174.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 174.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 170.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 170.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 169.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 169.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 169.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 168.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 167.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 166.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 166.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 165.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 165.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 165.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 165.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 164.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 164.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 163.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 162.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 162.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 161.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 161.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 161.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 161.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 160.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 160.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 159.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 159.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 158.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 157.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 157.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 156.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 155.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 155.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 154.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 154.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 152.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 151.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 150.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 149.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 149.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 149.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 148.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 145.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 145.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 144.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 144.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 144.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 144.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 143.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 141.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 139.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 137.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 135.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 135.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 133.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 132.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 131.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 129.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 124.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 124.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 115.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 104.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

124.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 124.9
FF:10164-103B2 76 years, female 124.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

179.5
Pig sample Sample description nTPM
Caudate
nTPM: 179.5
Samples: 4

Max nTPM: 198.2
Min nTPM: 154.9
Sample A Female 167.8
Sample B Female 197.2
Sample C Male 198.2
Sample D Male 154.9

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