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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:160.9 nTPM
GTEx:160.9 nTPM
FANTOM5:203.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA015971
Squamous epithelial cells High

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 160.9
Samples: 156

Max nTPM: 317.0
Min nTPM: 103.7
Std nTPM: 38.0
Median nTPM: 151.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 317.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 293.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 271.5
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 271.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 270.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 240.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 238.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 233.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 229.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 226.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 225.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 221.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 220.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 219.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 215.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 214.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 207.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 203.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 203.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 200.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 200.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 199.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 198.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 198.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 197.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 196.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 195.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 189.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 188.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 187.9
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 187.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 187.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 187.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 185.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 185.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 184.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 182.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 180.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 180.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 180.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 180.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 179.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 179.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 178.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 178.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 176.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 175.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 172.2
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 169.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 168.5
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 168.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 167.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 165.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 164.1
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 162.9
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 162.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 162.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 162.3
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 162.0
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 161.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 161.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 160.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 160.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 160.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 159.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 159.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 157.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 156.8
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 156.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 156.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 156.2
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 155.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 153.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 152.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 152.5
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 152.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 151.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 151.7
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 151.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 150.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 150.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 150.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 148.8
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 148.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 148.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 146.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 146.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 146.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 146.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 146.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 145.8
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 145.6
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 144.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 144.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 143.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 143.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 143.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 143.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 143.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 142.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 141.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 141.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 141.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 141.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 140.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 139.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 139.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 139.2
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 137.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 137.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 137.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 137.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 137.1
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 136.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 136.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 136.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 135.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 134.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 134.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 133.9
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 133.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 133.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 133.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 133.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 132.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 130.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 129.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 129.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 128.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 128.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 127.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 127.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 126.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 124.8
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 123.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 123.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 123.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 122.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 121.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 121.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 120.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 120.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 120.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 120.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 119.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 118.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 117.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 115.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 115.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 115.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 112.4
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 111.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 108.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 108.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 105.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 103.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

203.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 203.9
FF:10204-103F6 68 years, female 203.9

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