HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:206.0 nTPM
HPA Brain:496.9 nTPM
GTEx:206.0 nTPM
FANTOM5:181.0 Scaled Tags Per Million
Pig:251.1 nTPM
Mouse:169.5 nTPM
Allen mouse:6.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041334
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 496.9
Sample id Sample description nTPM
Hippocampus
nTPM: 172.6
2529 Female, age 94, left hemisphere 204.1
1911 Female, age 85, right hemisphere 203.1
1898 Male, age 80, left hemisphere 196.6
2621 Female, age 67, right hemisphere 180.4
1855 Male, age 76, left hemisphere 167.5
2148 Female, age 91, left hemisphere 83.8
Dentate gyrus
nTPM: 144.7
2246 Female, age 85, both hemispheres 187.0
2010 Male, age 76, both hemispheres 142.7
2530 Female, age 94, left hemisphere 140.8
2531 Female, age 67, both hemispheres 136.4
2528 Male, age 74, both hemispheres 135.2
1927 Female, age 91, both hemispheres 126.0
Entorhinal gyrus
nTPM: 412.5
2764 Male, age 80, right hemisphere 521.7
2613 Female, age 94, left hemisphere 497.4
1938 Female, age 85, left hemisphere 437.9
1787 Male, age 76, left hemisphere 401.3
2686 Male, age 75, right hemisphere 374.7
2117 Female, age 91, right hemisphere 242.2
Hippocampus, CA1
nTPM: 200.7
2749 Male, age 80, left hemisphere 260.1
2082 Female, age 91, right hemisphere 248.7
2045 Male, age 76, both hemispheres 211.7
2527 Male, age 74, both hemispheres 173.3
1873 Female, age 85, both hemispheres 109.6
Hippocampus, CA2
nTPM: 221.4
2437 Female, age 94, left hemisphere 290.0
1892 Male, age 76, both hemispheres 283.5
2113 Female, age 91, right hemisphere 242.2
2249 Male, age 74, both hemispheres 224.1
1940 Female, age 85, left hemisphere 209.3
1963 Male, age 80, left hemisphere 79.3
Hippocampus, CA3
nTPM: 206.6
1867 Male, age 76, both hemispheres 335.9
2137 Male, age 80, left hemisphere 305.8
1891 Female, age 85, both hemispheres 218.5
2436 Male, age 74, both hemispheres 163.7
2861 Female, age 67, both hemispheres 118.4
2620 Female, age 94, left hemisphere 97.0
Parahippocampal cortex
nTPM: 396.0
1850 Male, age 80, both hemispheres 499.5
2532 Female, age 72, left hemisphere 457.5
2693 Female, age 94, both hemispheres 442.4
2622 Female, age 67, right hemisphere 427.0
2245 Female, age 91, both hemispheres 413.6
1933 Female, age 85, both hemispheres 404.4
2018 Male, age 76, both hemispheres 355.8
2250 Female, age 67, right hemisphere 353.9
1990 Female, age 91, right hemisphere 349.0
2692 Male, age 74, both hemispheres 257.0
Perirhinal gyrus
nTPM: 496.9
2848 Male, age 76, right hemisphere 612.8
1794 Male, age 80, right hemisphere 534.0
1847 Female, age 91, left hemisphere 520.1
1841 Female, age 85, right hemisphere 492.8
2521 Female, age 94, right hemisphere 324.7
Subiculum
nTPM: 263.3
1977 Female, age 85, both hemispheres 370.0
1901 Male, age 80, both hemispheres 288.4
2438 Female, age 94, left hemisphere 284.5
2042 Male, age 76, both hemispheres 269.7
2619 Male, age 74, both hemispheres 237.4
2729 Female, age 91, right hemisphere 130.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 206.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 206.0
Samples: 197

Max nTPM: 496.9
Min nTPM: 26.9
Std nTPM: 95.3
Median nTPM: 183.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 496.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 462.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 453.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 448.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 436.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 422.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 409.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 407.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 405.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 395.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 395.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 181.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 181.0
FF:10169-103B7 60 years, female 186.9
FF:10153-102I9 76 years, female 175.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 251.1
Pig sample Sample description nTPM
Subiculum
nTPM: 251.1
Samples: 4

Max nTPM: 356.2
Min nTPM: 169.2
Sample A Female 356.2
Sample B Female 207.0
Sample C Male 271.9
Sample D Male 169.2
Dorsal hippocampus
nTPM: 155.9
Samples: 4

Max nTPM: 220.9
Min nTPM: 79.4
Sample A Female 164.4
Sample B Female 159.0
Sample C Male 220.9
Sample D Male 79.4
Entorhinal cortex
nTPM: 226.2
Samples: 4

Max nTPM: 284.2
Min nTPM: 155.9
Sample A Female 247.1
Sample B Female 155.9
Sample C Male 284.2
Sample D Male 217.6
Ventral hippocampus
nTPM: 218.3
Samples: 4

Max nTPM: 317.2
Min nTPM: 141.2
Sample A Female 172.6
Sample B Female 141.2
Sample C Male 317.2
Sample D Male 242.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 169.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 169.5
Samples: 4

Max nTPM: 206.8
Min nTPM: 131.0
Sample A Male 131.0
Sample B Male 155.2
Sample C Female 185.1
Sample D Female 206.8
Hippocampal formation
nTPM: 103.8
Samples: 4

Max nTPM: 139.8
Min nTPM: 76.5
Sample A Male 139.8
Sample B Male 83.7
Sample C Female 76.5
Sample D Female 115.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.9
69113656 Antisense, RP_050316_02_E05, Mouse strain C57BL/6J (56 days, male) 7.8
73592534 Antisense, RP_051017_01_E10, Mouse strain C57BL/6J (56 days, male) 5.9

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