PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:311.0 nTPM
FANTOM5:159.0 Scaled Tags Per Million
Pig:151.0 nTPM
Mouse:80.9 nTPM
Allen mouse:4.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 311.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 111.5
2301 Female, age 85, both hemispheres 150.3
2188 Female, age 91, both hemispheres 107.8
2090 Male, age 80, both hemispheres 104.8
1984 Male, age 76, both hemispheres 82.9
Area postrema
nTPM: 142.3
2054 Male, age 76, both hemispheres 191.4
2799 Male, age 61, both hemispheres 160.4
2306 Male, age 80, both hemispheres 75.0
Dorsal cochlear nucleus
nTPM: 122.4
2187 Female, age 91, both hemispheres 158.7
2058 Male, age 76, both hemispheres 140.2
2370 Male, age 61, both hemispheres 123.7
2802 Male, age 74, right hemisphere 98.4
2378 Male, age 80, both hemispheres 90.9
Dorsal medullary reticular nucleus
nTPM: 152.2
2040 Female, age 85, both hemispheres 212.3
2373 Male, age 61, both hemispheres 127.9
2088 Male, age 76, both hemispheres 116.4
Dorsal motor vagal complex
nTPM: 186.6
2844 Male, age 55, unknown 300.4
2813 Female, age 72, unknown 248.1
2133 Female, age 91, both hemispheres 207.8
2000 Male, age 74, unknown 194.5
2797 Male, age 61, both hemispheres 170.0
2807 Female, age 85, both hemispheres 146.2
2643 Male, age 74, both hemispheres 145.8
2185 Male, age 76, both hemispheres 80.2
Dorsal tegmental nucleus
nTPM: 135.3
1936 Male, age 76, left hemisphere 147.0
2083 Male, age 80, both hemispheres 140.7
2358 Male, age 61, both hemispheres 138.5
2326 Male, age 74, both hemispheres 114.8
Dorsolateral tegmental area
nTPM: 153.7
2141 Male, age 76, both hemispheres 293.7
2360 Male, age 74, both hemispheres 154.0
2654 Male, age 80, both hemispheres 130.4
2751 Female, age 85, both hemispheres 108.2
2337 Male, age 61, both hemispheres 82.1
Gigantocellular reticular nuclei, medullary
nTPM: 114.3
2462 Male, age 74, both hemispheres 168.6
1876 Female, age 85, both hemispheres 145.3
2310 Male, age 80, both hemispheres 133.2
2387 Female, age 91, both hemispheres 89.5
2314 Male, age 61, both hemispheres 85.9
2022 Male, age 76, right hemisphere 63.2
Gigantocellular reticular nuclei, pars
nTPM: 130.1
2084 Female, age 85, both hemispheres 170.8
2168 Male, age 76, both hemispheres 141.1
2336 Male, age 61, both hemispheres 140.1
2706 Male, age 80, both hemispheres 99.7
2330 Male, age 80, both hemispheres 98.8
Inferior olive
nTPM: 93.2
2563 Male, age 74, both hemispheres 143.7
2628 Female, age 91, both hemispheres 118.5
2379 Male, age 80, both hemispheres 69.7
2178 Male, age 61, both hemispheres 68.1
2085 Female, age 85, both hemispheres 66.2
Kolliker-Fuse nucleus
nTPM: 144.8
2315 Male, age 76, right hemisphere 247.7
2163 Male, age 80, both hemispheres 106.0
2793 Female, age 91, left hemisphere 80.7
Lateral lemniscal nuclei
nTPM: 95.3
2036 Male, age 80, both hemispheres 139.6
2746 Female, age 85, left hemisphere 109.1
2169 Male, age 76, both hemispheres 90.3
2453 Male, age 74, right hemisphere 80.4
2320 Female, age 91, left hemisphere 56.9
Lateral medullary reticular nucleus
nTPM: 98.9
2852 Male, age 80, both hemispheres 113.4
2190 Female, age 85, both hemispheres 107.9
2305 Male, age 74, both hemispheres 101.5
2804 Female, age 91, both hemispheres 98.3
2044 Male, age 76, both hemispheres 89.9
2374 Male, age 61, both hemispheres 82.3
Lateral parabrachial nucleus
nTPM: 160.3
2790 Male, age 61, both hemispheres 176.9
2139 Female, age 85, right hemisphere 170.1
2792 Male, age 76, both hemispheres 166.6
2013 Male, age 80, both hemispheres 127.5
Lateral vestibular nucleus
nTPM: 113.4
2311 Male, age 80, both hemispheres 132.5
2184 Male, age 76, both hemispheres 94.2
Locus coeruleus
nTPM: 311.0
2123 Female, age 91, both hemispheres 362.6
2014 Male, age 55, unknown 337.9
2788 Male, age 74, unknown 312.3
1980 Male, age 76, both hemispheres 310.6
2720 Male, age 74, both hemispheres 306.6
2317 Female, age 72, unknown 296.3
2162 Male, age 80, both hemispheres 250.5
Medial olivary nucleus
nTPM: 103.7
2851 Male, age 80, both hemispheres 133.8
2138 Female, age 91, both hemispheres 118.4
1962 Male, age 76, both hemispheres 86.6
1943 Male, age 61, both hemispheres 76.2
Medial parabrachial nucleus
nTPM: 146.6
2786 Male, age 76, both hemispheres 181.7
2170 Female, age 91, both hemispheres 160.9
2854 Male, age 80, both hemispheres 153.6
2156 Male, age 61, both hemispheres 150.6
2463 Female, age 85, right hemisphere 86.2
Medial periolivary nuclei
nTPM: 96.6
2791 Male, age 74, right hemisphere 169.4
2063 Male, age 76, both hemispheres 115.0
2081 Male, age 80, both hemispheres 72.3
2171 Female, age 85, both hemispheres 69.1
2458 Female, age 91, both hemispheres 57.3
Medial vestibular nucleus
nTPM: 134.7
2743 Female, age 85, both hemispheres 180.3
2801 Male, age 74, both hemispheres 155.0
2134 Male, age 76, both hemispheres 141.3
2624 Male, age 61, both hemispheres 139.9
2803 Female, age 91, both hemispheres 107.8
2093 Male, age 80, both hemispheres 84.3
Motor facial nucleus
nTPM: 126.4
2365 Male, age 74, right hemisphere 147.2
2327 Male, age 80, both hemispheres 143.0
2126 Male, age 61, both hemispheres 138.9
2697 Female, age 85, both hemispheres 135.7
2062 Male, age 76, both hemispheres 115.5
2795 Female, age 91, both hemispheres 77.9
Motor hypoglossal nucleus
nTPM: 167.9
2277 Male, age 76, both hemispheres 233.3
2461 Male, age 61, both hemispheres 187.5
2132 Female, age 85, both hemispheres 161.9
2182 Male, age 80, both hemispheres 134.5
2125 Female, age 91, both hemispheres 122.0
Motor trigeminal nucleus
nTPM: 124.7
2335 Male, age 61, both hemispheres 168.2
2309 Male, age 76, both hemispheres 141.8
2079 Male, age 80, both hemispheres 109.1
2560 Male, age 74, both hemispheres 103.7
2321 Female, age 91, both hemispheres 100.7
Nuclei of the trapezoid body
nTPM: 97.8
2735 Female, age 85, both hemispheres 135.7
1983 Male, age 76, both hemispheres 103.4
2166 Male, age 80, both hemispheres 101.8
2159 Male, age 61, both hemispheres 83.0
2368 Female, age 91, both hemispheres 65.4
Nucleus ambiguus
nTPM: 131.7
2096 Female, age 85, both hemispheres 182.9
2071 Male, age 76, both hemispheres 80.4
Nucleus cuneatus
nTPM: 82.5
2562 Male, age 61, both hemispheres 189.7
2376 Male, age 61, both hemispheres 103.8
2564 Male, age 74, both hemispheres 83.9
2808 Female, age 85, both hemispheres 79.0
2805 Female, age 91, both hemispheres 74.7
2380 Male, age 80, both hemispheres 70.3
2381 Male, age 80, both hemispheres 60.0
2131 Male, age 76, both hemispheres 52.6
2100 Male, age 76, both hemispheres 28.4
Nucleus gracilis
nTPM: 82.1
2627 Male, age 74, both hemispheres 143.1
2382 Male, age 80, both hemispheres 57.6
2299 Female, age 85, both hemispheres 45.6
Nucleus raphe magnus
nTPM: 104.8
2455 Male, age 74, both hemispheres 154.0
2160 Male, age 61, both hemispheres 130.0
2172 Female, age 85, both hemispheres 127.2
2328 Male, age 80, both hemispheres 112.9
2051 Male, age 76, both hemispheres 57.9
2459 Female, age 91, both hemispheres 46.8
Nucleus raphe obscurus
nTPM: 94.8
2800 Male, age 61, midline 103.1
2845 Female, age 85, midline 93.5
2142 Male, age 76, midline 87.8
Nucleus raphe pallidus
nTPM: 118.8
2183 Male, age 80, midline 172.7
1924 Male, age 61, midline 94.7
2145 Male, age 76, midline 89.1
Nucleus tractus solitarii
nTPM: 188.1
2656 Male, age 76, both hemispheres 285.5
2307 Male, age 80, both hemispheres 201.2
2144 Female, age 91, right hemisphere 136.5
2191 Female, age 85, both hemispheres 129.1
Paramedian reticular nucleus
nTPM: 163.1
2313 Male, age 61, both hemispheres 234.7
2057 Male, age 80, both hemispheres 144.7
2050 Female, age 85, both hemispheres 144.1
2052 Male, age 76, both hemispheres 128.9
Parvicellular reticular nuclei
nTPM: 101.1
2119 Male, age 80, both hemispheres 130.5
2558 Male, age 74, both hemispheres 100.7
2095 Male, age 76, both hemispheres 72.0
Parvicellular reticular nuclei, medullary
nTPM: 154.4
2181 Male, age 80, left hemisphere 183.8
2189 Female, age 91, both hemispheres 158.1
2091 Female, age 85, both hemispheres 121.3
Pedunculopontine tegmental nucleus
nTPM: 177.0
1921 Female, age 85, both hemispheres 222.7
2334 Male, age 80, both hemispheres 195.8
2338 Male, age 61, both hemispheres 112.5
Peritrigeminal nucleus
nTPM: 99.8
2067 Female, age 85, both hemispheres 128.3
2179 Male, age 61, both hemispheres 114.8
2136 Male, age 76, both hemispheres 56.2
Pontine nuclei
nTPM: 79.4
2787 Female, age 85, both hemispheres 125.6
1863 Male, age 55, unknown 90.3
2727 Male, age 61, right hemisphere 76.8
2109 Female, age 72, unknown 76.1
2115 Male, age 80, left hemisphere 74.8
2319 Female, age 91, both hemispheres 71.9
2454 Male, age 74, left hemisphere 61.4
1968 Male, age 76, left hemisphere 58.3
Pontine raphe nucleus
nTPM: 217.3
2853 Male, age 76, midline 274.0
2122 Female, age 85, midline 160.6
Posteroventral cochlear nucleus
nTPM: 111.6
2752 Female, age 85, both hemispheres 175.2
2070 Male, age 76, both hemispheres 115.5
2135 Female, age 91, both hemispheres 103.4
2371 Male, age 61, both hemispheres 98.0
2341 Male, age 80, both hemispheres 66.0
Prepositus hypoglossal nucleus
nTPM: 145.8
2855 Female, age 85, right hemisphere 161.5
2086 Male, age 80, both hemispheres 130.1
Principal sensory trigeminal nucleus
nTPM: 103.2
2158 Male, age 61, both hemispheres 136.7
2008 Male, age 80, left hemisphere 120.0
2324 Male, age 76, both hemispheres 101.6
2367 Female, age 91, left hemisphere 54.6
Reticular pontine nucleus, caudal
nTPM: 93.2
2092 Male, age 76, both hemispheres 113.1
2559 Male, age 74, both hemispheres 104.3
2332 Male, age 80, right hemisphere 101.0
2457 Female, age 91, both hemispheres 54.4
Reticular pontine nucleus, oral
nTPM: 112.6
2012 Female, age 85, both hemispheres 146.1
2167 Male, age 76, both hemispheres 135.3
1939 Male, age 80, both hemispheres 120.2
2361 Male, age 74, both hemispheres 88.3
2366 Female, age 91, both hemispheres 73.2
Reticulotegmental nucleus
nTPM: 127.2
2325 Male, age 76, both hemispheres 182.6
2322 Female, age 91, both hemispheres 113.9
2333 Male, age 80, both hemispheres 108.4
2452 Male, age 74, both hemispheres 103.9
Spinal trigeminal nucleus, caudal
nTPM: 110.2
2390 Female, age 91, both hemispheres 153.1
2308 Male, age 80, both hemispheres 115.2
2642 Male, age 74, both hemispheres 110.5
2312 Male, age 61, both hemispheres 99.6
2447 Male, age 76, both hemispheres 72.4
Spinal trigeminal nucleus, interpolar
nTPM: 132.6
2033 Male, age 80, both hemispheres 176.0
2625 Male, age 61, both hemispheres 136.0
2389 Female, age 91, both hemispheres 134.0
2386 Female, age 85, both hemispheres 127.8
2066 Male, age 76, right hemisphere 89.1
Spinal trigeminal nucleus, oral
nTPM: 127.6
1978 Male, age 76, both hemispheres 168.6
2737 Female, age 85, both hemispheres 127.4
2164 Male, age 80, both hemispheres 86.8
Spinal vestibular nucleus
nTPM: 125.6
2780 Male, age 80, both hemispheres 146.8
2796 Male, age 61, both hemispheres 133.3
2806 Female, age 85, both hemispheres 129.8
2186 Female, age 91, both hemispheres 126.1
2748 Male, age 76, both hemispheres 116.3
2384 Male, age 74, both hemispheres 101.1
Subcoeruleus area
nTPM: 162.5
2323 Female, age 91, left hemisphere 276.7
2451 Male, age 74, both hemispheres 162.3
1958 Male, age 80, both hemispheres 158.4
2089 Male, age 76, left hemisphere 129.4
2369 Female, age 85, left hemisphere 85.6
Superior olive
nTPM: 127.8
1875 Female, age 85, both hemispheres 162.9
2364 Male, age 74, right hemisphere 156.4
2020 Male, age 76, both hemispheres 135.0
2329 Male, age 80, right hemisphere 113.5
2561 Female, age 91, both hemispheres 71.3
Superior vestibular nucleus
nTPM: 189.8
2383 Male, age 74, both hemispheres 236.4
2061 Male, age 76, both hemispheres 184.8
2015 Male, age 80, both hemispheres 148.0
Ventral medullary reticular nucleus
nTPM: 122.4
2060 Male, age 76, both hemispheres 170.1
2372 Male, age 61, both hemispheres 74.7
Ventral periolivary nuclei
nTPM: 125.9
2130 Female, age 85, both hemispheres 150.4
2023 Male, age 76, both hemispheres 150.3
2165 Male, age 80, both hemispheres 122.3
2794 Female, age 91, left hemisphere 80.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 92.9
2180 Male, age 61, both hemispheres 135.4
2741 Female, age 85, both hemispheres 115.2
2302 Female, age 91, both hemispheres 87.6
2118 Male, age 80, both hemispheres 63.9
1986 Male, age 76, both hemispheres 62.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 115.3
2359 Male, age 61, both hemispheres 173.8
1959 Male, age 76, both hemispheres 132.0
2449 Male, age 74, both hemispheres 123.7
2840 Female, age 85, both hemispheres 104.5
2161 Male, age 80, both hemispheres 103.7
2456 Female, age 91, both hemispheres 53.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 159.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 128.3
FF:10165-103B3 76 years, female 134.0
FF:10182-103D2 60 years, female 122.6
Medulla oblongata
Scaled Tags Per Million: 121.2
FF:10038-101F2 18-64 years, mixed 147.3
FF:10155-103A2 76 years, female 126.6
FF:10174-103C3 60 years, female 89.8
Pons
Scaled Tags Per Million: 159.0
FF:10033-101E6 18-54 years, mixed 159.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 151.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 101.4
Samples: 4

Max nTPM: 130.6
Min nTPM: 79.0
Sample A Female 79.0
Sample B Female 88.1
Sample C Male 130.6
Sample D Male 107.9
Pons
nTPM: 151.0
Samples: 4

Max nTPM: 172.3
Min nTPM: 88.1
Sample A Female 172.3
Sample B Female 171.7
Sample C Male 172.0
Sample D Male 88.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 80.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 80.9
Samples: 4

Max nTPM: 89.3
Min nTPM: 72.2
Sample A Male 88.0
Sample B Male 72.2
Sample C Female 89.3
Sample D Female 74.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.6
69113656 Antisense, RP_050316_02_E05, Mouse strain C57BL/6J (56 days, male) 4.5
73592534 Antisense, RP_051017_01_E10, Mouse strain C57BL/6J (56 days, male) 2.7
Pons
Expression energy: 4.2
69113656 Antisense, RP_050316_02_E05, Mouse strain C57BL/6J (56 days, male) 4.7
73592534 Antisense, RP_051017_01_E10, Mouse strain C57BL/6J (56 days, male) 3.7

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