PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:444.3 nTPM
FANTOM5:354.0 Scaled Tags Per Million
Pig:2.7 nTPM
Mouse:1342.5 nTPM
Allen mouse:3.8 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 444.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 413.5
2301 Female, age 85, both hemispheres 485.2
2090 Male, age 80, both hemispheres 453.0
2188 Female, age 91, both hemispheres 408.5
1984 Male, age 76, both hemispheres 307.4
Area postrema
nTPM: 383.7
2306 Male, age 80, both hemispheres 477.4
2799 Male, age 61, both hemispheres 403.5
2054 Male, age 76, both hemispheres 270.2
Dorsal cochlear nucleus
nTPM: 394.2
2187 Female, age 91, both hemispheres 460.3
2370 Male, age 61, both hemispheres 425.4
2378 Male, age 80, both hemispheres 422.2
2058 Male, age 76, both hemispheres 343.6
2802 Male, age 74, right hemisphere 319.8
Dorsal medullary reticular nucleus
nTPM: 343.3
2373 Male, age 61, both hemispheres 382.7
2088 Male, age 76, both hemispheres 337.2
2040 Female, age 85, both hemispheres 310.0
Dorsal motor vagal complex
nTPM: 385.8
2797 Male, age 61, both hemispheres 440.0
2807 Female, age 85, both hemispheres 430.9
2643 Male, age 74, both hemispheres 413.6
2185 Male, age 76, both hemispheres 400.8
2133 Female, age 91, both hemispheres 379.1
2000 Male, age 74, unknown 354.4
2844 Male, age 55, unknown 349.2
2813 Female, age 72, unknown 318.0
Dorsal tegmental nucleus
nTPM: 406.1
2358 Male, age 61, both hemispheres 479.0
2083 Male, age 80, both hemispheres 419.6
2326 Male, age 74, both hemispheres 409.4
1936 Male, age 76, left hemisphere 316.3
Dorsolateral tegmental area
nTPM: 392.0
2337 Male, age 61, both hemispheres 473.0
2654 Male, age 80, both hemispheres 429.1
2751 Female, age 85, both hemispheres 368.5
2360 Male, age 74, both hemispheres 357.4
2141 Male, age 76, both hemispheres 331.7
Gigantocellular reticular nuclei, medullary
nTPM: 351.9
2314 Male, age 61, both hemispheres 432.8
2310 Male, age 80, both hemispheres 378.7
2387 Female, age 91, both hemispheres 361.9
2462 Male, age 74, both hemispheres 320.3
2022 Male, age 76, right hemisphere 312.6
1876 Female, age 85, both hemispheres 304.9
Gigantocellular reticular nuclei, pars
nTPM: 328.5
2084 Female, age 85, both hemispheres 360.4
2336 Male, age 61, both hemispheres 335.9
2330 Male, age 80, both hemispheres 332.8
2168 Male, age 76, both hemispheres 321.8
2706 Male, age 80, both hemispheres 291.9
Inferior olive
nTPM: 444.3
2085 Female, age 85, both hemispheres 495.9
2379 Male, age 80, both hemispheres 453.4
2563 Male, age 74, both hemispheres 430.4
2178 Male, age 61, both hemispheres 430.2
2628 Female, age 91, both hemispheres 411.4
Kolliker-Fuse nucleus
nTPM: 381.8
2315 Male, age 76, right hemisphere 404.2
2163 Male, age 80, both hemispheres 373.2
2793 Female, age 91, left hemisphere 368.1
Lateral lemniscal nuclei
nTPM: 325.3
2169 Male, age 76, both hemispheres 366.2
2746 Female, age 85, left hemisphere 337.7
2453 Male, age 74, right hemisphere 317.1
2036 Male, age 80, both hemispheres 303.8
2320 Female, age 91, left hemisphere 301.5
Lateral medullary reticular nucleus
nTPM: 392.4
2190 Female, age 85, both hemispheres 473.0
2852 Male, age 80, both hemispheres 411.2
2804 Female, age 91, both hemispheres 391.2
2374 Male, age 61, both hemispheres 390.2
2305 Male, age 74, both hemispheres 386.0
2044 Male, age 76, both hemispheres 303.0
Lateral parabrachial nucleus
nTPM: 358.4
2792 Male, age 76, both hemispheres 385.0
2139 Female, age 85, right hemisphere 376.1
2013 Male, age 80, both hemispheres 362.8
2790 Male, age 61, both hemispheres 309.6
Lateral vestibular nucleus
nTPM: 402.1
2311 Male, age 80, both hemispheres 451.6
2184 Male, age 76, both hemispheres 352.7
Locus coeruleus
nTPM: 342.1
2162 Male, age 80, both hemispheres 404.3
2123 Female, age 91, both hemispheres 384.1
1980 Male, age 76, both hemispheres 363.4
2317 Female, age 72, unknown 332.8
2014 Male, age 55, unknown 324.4
2720 Male, age 74, both hemispheres 298.6
2788 Male, age 74, unknown 287.2
Medial olivary nucleus
nTPM: 429.9
1962 Male, age 76, both hemispheres 495.1
2138 Female, age 91, both hemispheres 444.4
1943 Male, age 61, both hemispheres 410.3
2851 Male, age 80, both hemispheres 369.8
Medial parabrachial nucleus
nTPM: 375.9
2170 Female, age 91, both hemispheres 508.0
2156 Male, age 61, both hemispheres 393.6
2786 Male, age 76, both hemispheres 349.5
2854 Male, age 80, both hemispheres 331.1
2463 Female, age 85, right hemisphere 297.5
Medial periolivary nuclei
nTPM: 350.0
2063 Male, age 76, both hemispheres 409.0
2081 Male, age 80, both hemispheres 401.8
2458 Female, age 91, both hemispheres 375.1
2171 Female, age 85, both hemispheres 308.2
2791 Male, age 74, right hemisphere 255.9
Medial vestibular nucleus
nTPM: 336.2
2624 Male, age 61, both hemispheres 368.9
2093 Male, age 80, both hemispheres 353.0
2743 Female, age 85, both hemispheres 338.2
2134 Male, age 76, both hemispheres 332.0
2801 Male, age 74, both hemispheres 317.5
2803 Female, age 91, both hemispheres 307.9
Motor facial nucleus
nTPM: 320.4
2126 Male, age 61, both hemispheres 367.0
2062 Male, age 76, both hemispheres 352.3
2365 Male, age 74, right hemisphere 316.6
2795 Female, age 91, both hemispheres 315.4
2697 Female, age 85, both hemispheres 286.9
2327 Male, age 80, both hemispheres 283.9
Motor hypoglossal nucleus
nTPM: 393.4
2182 Male, age 80, both hemispheres 545.2
2132 Female, age 85, both hemispheres 439.5
2125 Female, age 91, both hemispheres 366.9
2277 Male, age 76, both hemispheres 311.2
2461 Male, age 61, both hemispheres 304.5
Motor trigeminal nucleus
nTPM: 365.7
2335 Male, age 61, both hemispheres 410.9
2309 Male, age 76, both hemispheres 374.4
2321 Female, age 91, both hemispheres 362.4
2560 Male, age 74, both hemispheres 347.6
2079 Male, age 80, both hemispheres 333.2
Nuclei of the trapezoid body
nTPM: 354.0
1983 Male, age 76, both hemispheres 438.3
2166 Male, age 80, both hemispheres 354.0
2368 Female, age 91, both hemispheres 351.9
2159 Male, age 61, both hemispheres 328.2
2735 Female, age 85, both hemispheres 297.6
Nucleus ambiguus
nTPM: 418.0
2071 Male, age 76, both hemispheres 460.9
2096 Female, age 85, both hemispheres 375.2
Nucleus cuneatus
nTPM: 360.2
2808 Female, age 85, both hemispheres 411.2
2380 Male, age 80, both hemispheres 385.0
2381 Male, age 80, both hemispheres 380.7
2564 Male, age 74, both hemispheres 372.5
2562 Male, age 61, both hemispheres 354.2
2805 Female, age 91, both hemispheres 354.2
2376 Male, age 61, both hemispheres 345.1
2131 Male, age 76, both hemispheres 321.7
2100 Male, age 76, both hemispheres 317.2
Nucleus gracilis
nTPM: 428.9
2299 Female, age 85, both hemispheres 467.7
2382 Male, age 80, both hemispheres 446.6
2627 Male, age 74, both hemispheres 372.5
Nucleus raphe magnus
nTPM: 318.0
2459 Female, age 91, both hemispheres 358.9
2455 Male, age 74, both hemispheres 327.7
2051 Male, age 76, both hemispheres 316.5
2328 Male, age 80, both hemispheres 314.7
2172 Female, age 85, both hemispheres 306.8
2160 Male, age 61, both hemispheres 283.3
Nucleus raphe obscurus
nTPM: 377.6
2142 Male, age 76, midline 436.0
2845 Female, age 85, midline 355.3
2800 Male, age 61, midline 341.7
Nucleus raphe pallidus
nTPM: 391.0
2183 Male, age 80, midline 436.1
1924 Male, age 61, midline 387.0
2145 Male, age 76, midline 349.8
Nucleus tractus solitarii
nTPM: 345.2
2191 Female, age 85, both hemispheres 470.5
2307 Male, age 80, both hemispheres 370.0
2656 Male, age 76, both hemispheres 293.9
2144 Female, age 91, right hemisphere 246.3
Paramedian reticular nucleus
nTPM: 332.7
2057 Male, age 80, both hemispheres 404.1
2313 Male, age 61, both hemispheres 344.7
2052 Male, age 76, both hemispheres 317.2
2050 Female, age 85, both hemispheres 264.8
Parvicellular reticular nuclei
nTPM: 380.2
2119 Male, age 80, both hemispheres 404.3
2095 Male, age 76, both hemispheres 402.6
2558 Male, age 74, both hemispheres 333.8
Parvicellular reticular nuclei, medullary
nTPM: 371.3
2181 Male, age 80, left hemisphere 384.1
2189 Female, age 91, both hemispheres 368.1
2091 Female, age 85, both hemispheres 361.8
Pedunculopontine tegmental nucleus
nTPM: 363.5
2338 Male, age 61, both hemispheres 419.2
2334 Male, age 80, both hemispheres 400.4
1921 Female, age 85, both hemispheres 270.8
Peritrigeminal nucleus
nTPM: 422.7
2067 Female, age 85, both hemispheres 482.2
2136 Male, age 76, both hemispheres 439.1
2179 Male, age 61, both hemispheres 346.8
Pontine nuclei
nTPM: 346.0
2115 Male, age 80, left hemisphere 404.4
2319 Female, age 91, both hemispheres 386.2
1968 Male, age 76, left hemisphere 380.4
1863 Male, age 55, unknown 337.4
2454 Male, age 74, left hemisphere 331.2
2109 Female, age 72, unknown 325.5
2787 Female, age 85, both hemispheres 324.3
2727 Male, age 61, right hemisphere 278.1
Pontine raphe nucleus
nTPM: 299.1
2122 Female, age 85, midline 320.8
2853 Male, age 76, midline 277.3
Posteroventral cochlear nucleus
nTPM: 408.6
2135 Female, age 91, both hemispheres 471.0
2371 Male, age 61, both hemispheres 440.8
2341 Male, age 80, both hemispheres 415.9
2070 Male, age 76, both hemispheres 368.9
2752 Female, age 85, both hemispheres 346.3
Prepositus hypoglossal nucleus
nTPM: 395.7
2086 Male, age 80, both hemispheres 417.3
2855 Female, age 85, right hemisphere 374.1
Principal sensory trigeminal nucleus
nTPM: 330.6
2367 Female, age 91, left hemisphere 371.4
2158 Male, age 61, both hemispheres 361.5
2324 Male, age 76, both hemispheres 350.4
2008 Male, age 80, left hemisphere 239.3
Reticular pontine nucleus, caudal
nTPM: 407.0
2457 Female, age 91, both hemispheres 501.9
2559 Male, age 74, both hemispheres 418.1
2092 Male, age 76, both hemispheres 406.1
2332 Male, age 80, right hemisphere 301.8
Reticular pontine nucleus, oral
nTPM: 345.3
2366 Female, age 91, both hemispheres 406.4
2361 Male, age 74, both hemispheres 401.0
2167 Male, age 76, both hemispheres 347.3
1939 Male, age 80, both hemispheres 293.2
2012 Female, age 85, both hemispheres 278.4
Reticulotegmental nucleus
nTPM: 377.8
2452 Male, age 74, both hemispheres 454.0
2322 Female, age 91, both hemispheres 378.6
2333 Male, age 80, both hemispheres 367.8
2325 Male, age 76, both hemispheres 310.7
Spinal trigeminal nucleus, caudal
nTPM: 354.6
2308 Male, age 80, both hemispheres 390.5
2447 Male, age 76, both hemispheres 370.7
2312 Male, age 61, both hemispheres 359.2
2642 Male, age 74, both hemispheres 334.4
2390 Female, age 91, both hemispheres 317.9
Spinal trigeminal nucleus, interpolar
nTPM: 336.8
2389 Female, age 91, both hemispheres 373.5
2066 Male, age 76, right hemisphere 355.1
2033 Male, age 80, both hemispheres 343.8
2386 Female, age 85, both hemispheres 318.7
2625 Male, age 61, both hemispheres 292.8
Spinal trigeminal nucleus, oral
nTPM: 348.1
2164 Male, age 80, both hemispheres 383.6
1978 Male, age 76, both hemispheres 366.4
2737 Female, age 85, both hemispheres 294.2
Spinal vestibular nucleus
nTPM: 381.2
2384 Male, age 74, both hemispheres 431.0
2780 Male, age 80, both hemispheres 392.1
2748 Male, age 76, both hemispheres 377.7
2186 Female, age 91, both hemispheres 370.9
2796 Male, age 61, both hemispheres 362.1
2806 Female, age 85, both hemispheres 353.5
Subcoeruleus area
nTPM: 361.7
2451 Male, age 74, both hemispheres 499.2
2369 Female, age 85, left hemisphere 355.4
2323 Female, age 91, left hemisphere 333.5
2089 Male, age 76, left hemisphere 330.1
1958 Male, age 80, both hemispheres 290.3
Superior olive
nTPM: 314.9
2561 Female, age 91, both hemispheres 370.5
2020 Male, age 76, both hemispheres 355.7
2364 Male, age 74, right hemisphere 318.9
2329 Male, age 80, right hemisphere 300.5
1875 Female, age 85, both hemispheres 229.0
Superior vestibular nucleus
nTPM: 390.9
2061 Male, age 76, both hemispheres 427.7
2015 Male, age 80, both hemispheres 393.6
2383 Male, age 74, both hemispheres 351.4
Ventral medullary reticular nucleus
nTPM: 406.0
2372 Male, age 61, both hemispheres 436.7
2060 Male, age 76, both hemispheres 375.4
Ventral periolivary nuclei
nTPM: 309.8
2165 Male, age 80, both hemispheres 347.3
2023 Male, age 76, both hemispheres 333.9
2794 Female, age 91, left hemisphere 298.5
2130 Female, age 85, both hemispheres 259.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 423.0
2118 Male, age 80, both hemispheres 479.9
2302 Female, age 91, both hemispheres 438.4
2741 Female, age 85, both hemispheres 412.6
1986 Male, age 76, both hemispheres 392.3
2180 Male, age 61, both hemispheres 392.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 335.2
2161 Male, age 80, both hemispheres 383.0
2359 Male, age 61, both hemispheres 368.7
2456 Female, age 91, both hemispheres 360.1
2449 Male, age 74, both hemispheres 306.9
2840 Female, age 85, both hemispheres 305.0
1959 Male, age 76, both hemispheres 287.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 354.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 318.1
FF:10182-103D2 60 years, female 333.2
FF:10165-103B3 76 years, female 302.9
Medulla oblongata
Scaled Tags Per Million: 354.0
FF:10174-103C3 60 years, female 621.4
FF:10155-103A2 76 years, female 290.6
FF:10038-101F2 18-64 years, mixed 149.9
Pons
Scaled Tags Per Million: 106.3
FF:10033-101E6 18-54 years, mixed 106.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 2.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2.7
Samples: 4

Max nTPM: 3.5
Min nTPM: 0.9
Sample A Female 3.5
Sample B Female 3.5
Sample C Male 0.9
Sample D Male 2.9
Pons
nTPM: 2.3
Samples: 4

Max nTPM: 4.3
Min nTPM: 0.2
Sample A Female 0.2
Sample B Female 4.3
Sample C Male 2.4
Sample D Male 2.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1342.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1342.5
Samples: 4

Max nTPM: 1605.5
Min nTPM: 1140.4
Sample A Male 1605.5
Sample B Male 1140.4
Sample C Female 1467.2
Sample D Female 1157.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.8
69818344 Antisense, RP_050510_04_H07, Mouse strain C57BL/6J (56 days, male) 3.8
Pons
Expression energy: 3.0
69818344 Antisense, RP_050510_04_H07, Mouse strain C57BL/6J (56 days, male) 3.0

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