We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPLP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPLP1
TISSUE SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1113.9 nTPM
HPA Brain:497.8 nTPM
GTEx:1113.9 nTPM
FANTOM5:365.3 Scaled Tags Per Million
Pig:3.8 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

497.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 381.9
1981 Female, age 72, midline 472.5
2565 Male, age 75, midline 416.5
2194 Female, age 79, both hemispheres 385.4
2816 Male, age 47, midline 325.2
2048 Male, age 55, midline 309.6
Cervical spinal cord, dorsal horn
nTPM: 390.6
2069 Male, age 47, both hemispheres 530.8
2173 Female, age 72, unknown 473.3
2296 Male, age 66, both hemispheres 431.6
1877 Male, age 55, unknown 357.0
2297 Male, age 75, both hemispheres 287.1
2721 Male, age 90, both hemispheres 263.6
Cervical spinal cord, ventral horn
nTPM: 497.8
2480 Male, age 75, both hemispheres 681.7
2809 Male, age 90, both hemispheres 617.8
2098 Female, age 72, unknown 538.5
2068 Male, age 55, unknown 475.6
2295 Male, age 66, both hemispheres 421.3
2820 Female, age 79, both hemispheres 252.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1113.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1113.9
Samples: 159

Max nTPM: 2264.7
Min nTPM: 308.0
Std nTPM: 351.1
Median nTPM: 1072.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2264.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2138.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 2113.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2002.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1972.7
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1929.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1897.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1808.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1737.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1703.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1671.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1659.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1629.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1618.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1595.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1574.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1566.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1553.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1547.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1522.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1516.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1482.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1471.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1466.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1461.6
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1455.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1448.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1427.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1426.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1398.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1387.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1361.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1343.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1339.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1335.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1330.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1329.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1320.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1319.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1314.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1307.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1287.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1277.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1259.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1259.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1256.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1246.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1245.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1235.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1225.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1220.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1215.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1213.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1208.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1205.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1204.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1200.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1199.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1199.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1197.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1191.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1181.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1176.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1176.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1169.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1168.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1139.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1137.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1136.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1135.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1131.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1125.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1121.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1108.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1095.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1094.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1081.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1077.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1073.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1072.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1070.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1063.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1058.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1038.7
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1037.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1033.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1025.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1023.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1022.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1019.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1018.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1015.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1010.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1003.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1002.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1000.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 998.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 991.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 988.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 983.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 977.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 974.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 967.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 967.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 965.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 961.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 937.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 929.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 927.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 926.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 918.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 914.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 901.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 886.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 880.8
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 861.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 860.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 846.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 843.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 836.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 834.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 829.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 829.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 825.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 824.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 823.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 820.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 817.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 816.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 796.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 787.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 780.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 778.1
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 773.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 767.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 765.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 734.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 731.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 730.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 729.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 725.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 721.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 714.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 710.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 709.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 692.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 687.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 686.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 683.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 681.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 648.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 630.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 630.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 613.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 582.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 538.7
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 525.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 435.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 308.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

365.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 365.3
FF:10181-103D1 60 years, female 494.5
FF:10159-103A6 76 years, female 236.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 3.8
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.4
Sample A Female 6.2
Sample B Female 2.9
Sample C Male 3.6
Sample D Male 2.4
Ventral spinal cord
nTPM: 3.2
Samples: 4

Max nTPM: 4.9
Min nTPM: 1.7
Sample A Female 2.1
Sample B Female 4.9
Sample C Male 1.7
Sample D Male 4.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org