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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:934.5 nTPM
GTEx:934.5 nTPM
FANTOM5:684.4 Scaled Tags Per Million

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

934.5
GTEx sample id Sample description nTPM
Retina
Average nTPM: 934.5
Samples: 105

Max nTPM: 1432.5
Min nTPM: 510.4
Std nTPM: 182.8
Median nTPM:
491_1 89 years, female 1432.5
35_1 74 years, female 1340.0
414_1 84 years, female 1315.9
495_1 57 years, female 1306.2
490_1 67 years, female 1301.7
307_1 66 years, female 1278.5
413_1 59 years, female 1250.7
265_1 87 years, male 1226.5
384_1 83 years, male 1186.8
237_1 82 years, male 1183.6
308_1 70 years, female 1171.0
379_1 60 years, male 1148.9
246_1 77 years, male 1144.1
396_1 62 years, male 1144.1
375_1 74 years, female 1138.3
315_1 62 years, female 1102.2
313_1 79 years, female 1099.7
501_1 88 years, male 1098.9
389_1 86 years, female 1090.8
415_1 77 years, female 1090.1
189_1 76 years, male 1089.5
254_1 77 years, female 1089.4
120_1 70 years, female 1089.0
466_1 57 years, female 1088.6
41_1 94 years, female 1085.1
452_1 88 years, female 1082.6
4_1 88 years, female 1081.1
137_1 83 years, male 1078.8
162_1 79 years, female 1061.9
447_1 81 years, male 1054.8
42_1 85 years, male 1043.7
126_1 63 years, male 1041.7
376_1 75 years, female 1034.7
139_1 64 years, female 1030.8
119_1 70 years, female 1027.2
142_1 61 years, female 1019.9
117_1 61 years, male 1019.1
153_1 70 years, female 1017.8
229_1 69 years, female 1000.1
217_1 76 years, male 976.8
347_1 72 years, male 972.1
386_1 76 years, male 967.3
17_1 71 years, male 959.7
145_1 84 years, male 956.8
321_1 62 years, female 954.3
526_1 61 years, male 939.7
89_1 63 years, male 938.3
314_1 67 years, male 932.2
218_1 71 years, female 920.8
288_1 66 years, female 920.2
2_1 77 years, female 919.5
32_1 67 years, male 918.7
311_1 78 years, male 914.9
355_1 70 years, female 910.4
404_1 82 years, female 910.3
394_1 75 years, female 910.2
149_1 88 years, male 901.6
322_1 76 years, male 896.0
377_1 82 years, female 883.2
43_1 64 years, female 878.8
81_1 67 years, male 876.0
18_1 88 years, male 873.0
173_1 67 years, male 869.3
251_1 78 years, male 861.5
266_1 85 years, male 860.9
243_1 75 years, male 858.0
518_1 75 years, female 857.1
348_1 84 years, male 846.5
319_1 81 years, male 842.1
324_1 76 years, male 840.9
468_1 89 years, male 838.1
6_1 73 years, female 835.4
320_1 89 years, female 833.9
99_1 64 years, male 826.7
351_1 91 years, male 821.8
499_1 55 years, female 821.4
109_1 81 years, female 819.2
406_1 79 years, male 812.9
295_1 61 years, female 808.8
264_1 73 years, female 804.9
286_1 68 years, female 803.0
115_1 83 years, male 800.4
405_1 91 years, male 799.6
291_1 76 years, male 791.0
349_1 83 years, male 773.6
316_1 62 years, male 762.8
503_1 68 years, male 761.7
425_1 59 years, female 760.5
335_1 73 years, female 753.7
317_1 60 years, male 745.0
354_1 81 years, female 743.9
506_1 65 years, male 734.6
163_1 78 years, male 710.5
517_1 88 years, male 704.1
172_1 72 years, female 698.9
353_1 82 years, female 695.8
352_1 62 years, male 695.5
350_1 84 years, female 685.1
9_1 66 years, female 684.7
293_1 68 years, female 662.8
480_1 63 years, male 661.7
318_1 68 years, male 643.1
292_1 71 years, male 619.0
356_1 87 years, female 545.2
177_1 74 years, male 510.4
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

684.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 684.4
FF:10030-101E3 24-65 years, mixed 684.4

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