PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		145.082
Mouse brain, Intensity
Ponsi 		165.340
RNA expressioni
HPA Brain:368.7 nTPM
FANTOM5:310.6 Scaled Tags Per Million
Pig:235.5 nTPM
Mouse:608.6 nTPM
Allen mouse:16.4 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody CAB079000
Medulla oblongata mean intensity 145.082
intensityi
FRONT BACK
Nucleus of the solitary tract 117.198
Raphe magnus nucleus 118.395
Cochlear nucleus 107.489
Lateral paragigantocellular nucleus 102.423
Raphe pallidus nucleus 48.891
Facial nucleus 89.845
Hypoglossal nucleus 126.666
Ambiguus nucleus 94.469
External cuneate nucleus 89.762
Inferior olivary nucleus 113.547
Raphe obscures nucleus 48.389
Dorsal motor nucleus of vagus 80.943
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 78.646
Parabrachial nucleus 165.340
Principle sensory trigeminal nucleus 122.548
Locus coeruleus 111.081
Pontine nucleus 115.153
Vestibular nucleus 105.384
Pontine reticular nucleus, oral 51.072
Lateral lemniscus 96.103
Superior paraolivary nucleus 60.515

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 368.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 150.2
2301 Female, age 85, both hemispheres 185.4
1984 Male, age 76, both hemispheres 169.5
2188 Female, age 91, both hemispheres 129.2
2090 Male, age 80, both hemispheres 116.7
Area postrema
nTPM: 69.6
2054 Male, age 76, both hemispheres 118.7
2306 Male, age 80, both hemispheres 60.3
2799 Male, age 61, both hemispheres 29.9
Dorsal cochlear nucleus
nTPM: 137.8
2370 Male, age 61, both hemispheres 161.5
2058 Male, age 76, both hemispheres 156.7
2802 Male, age 74, right hemisphere 130.2
2187 Female, age 91, both hemispheres 121.3
2378 Male, age 80, both hemispheres 119.1
Dorsal medullary reticular nucleus
nTPM: 198.6
2040 Female, age 85, both hemispheres 252.9
2373 Male, age 61, both hemispheres 172.0
2088 Male, age 76, both hemispheres 170.9
Dorsal motor vagal complex
nTPM: 138.3
2133 Female, age 91, both hemispheres 339.4
2000 Male, age 74, unknown 222.5
2185 Male, age 76, both hemispheres 116.3
2813 Female, age 72, unknown 99.0
2844 Male, age 55, unknown 89.2
2643 Male, age 74, both hemispheres 84.5
2797 Male, age 61, both hemispheres 79.0
2807 Female, age 85, both hemispheres 76.3
Dorsal tegmental nucleus
nTPM: 141.5
2083 Male, age 80, both hemispheres 185.7
1936 Male, age 76, left hemisphere 139.8
2358 Male, age 61, both hemispheres 127.9
2326 Male, age 74, both hemispheres 112.7
Dorsolateral tegmental area
nTPM: 108.3
2654 Male, age 80, both hemispheres 170.9
2751 Female, age 85, both hemispheres 104.7
2141 Male, age 76, both hemispheres 100.1
2360 Male, age 74, both hemispheres 97.2
2337 Male, age 61, both hemispheres 68.5
Gigantocellular reticular nuclei, medullary
nTPM: 204.1
2462 Male, age 74, both hemispheres 377.9
2310 Male, age 80, both hemispheres 211.1
2022 Male, age 76, right hemisphere 206.4
1876 Female, age 85, both hemispheres 204.1
2387 Female, age 91, both hemispheres 145.6
2314 Male, age 61, both hemispheres 79.7
Gigantocellular reticular nuclei, pars
nTPM: 211.1
2168 Male, age 76, both hemispheres 286.1
2084 Female, age 85, both hemispheres 223.0
2336 Male, age 61, both hemispheres 204.8
2330 Male, age 80, both hemispheres 174.6
2706 Male, age 80, both hemispheres 167.1
Inferior olive
nTPM: 69.6
2628 Female, age 91, both hemispheres 112.7
2085 Female, age 85, both hemispheres 75.9
2563 Male, age 74, both hemispheres 64.3
2178 Male, age 61, both hemispheres 47.7
2379 Male, age 80, both hemispheres 47.3
Kolliker-Fuse nucleus
nTPM: 251.7
2163 Male, age 80, both hemispheres 495.1
2793 Female, age 91, left hemisphere 173.6
2315 Male, age 76, right hemisphere 86.3
Lateral lemniscal nuclei
nTPM: 264.9
2453 Male, age 74, right hemisphere 328.8
2169 Male, age 76, both hemispheres 303.2
2036 Male, age 80, both hemispheres 271.7
2746 Female, age 85, left hemisphere 236.4
2320 Female, age 91, left hemisphere 184.6
Lateral medullary reticular nucleus
nTPM: 133.2
2044 Male, age 76, both hemispheres 252.6
2804 Female, age 91, both hemispheres 123.1
2190 Female, age 85, both hemispheres 121.8
2305 Male, age 74, both hemispheres 113.5
2852 Male, age 80, both hemispheres 105.6
2374 Male, age 61, both hemispheres 82.6
Lateral parabrachial nucleus
nTPM: 173.7
2139 Female, age 85, right hemisphere 273.6
2790 Male, age 61, both hemispheres 199.8
2013 Male, age 80, both hemispheres 146.4
2792 Male, age 76, both hemispheres 74.9
Lateral vestibular nucleus
nTPM: 301.4
2184 Male, age 76, both hemispheres 432.9
2311 Male, age 80, both hemispheres 169.9
Locus coeruleus
nTPM: 116.2
2123 Female, age 91, both hemispheres 151.5
2720 Male, age 74, both hemispheres 141.4
2162 Male, age 80, both hemispheres 124.5
2317 Female, age 72, unknown 106.7
2014 Male, age 55, unknown 103.4
2788 Male, age 74, unknown 100.2
1980 Male, age 76, both hemispheres 85.7
Medial olivary nucleus
nTPM: 71.4
2851 Male, age 80, both hemispheres 113.2
1962 Male, age 76, both hemispheres 76.3
2138 Female, age 91, both hemispheres 49.2
1943 Male, age 61, both hemispheres 46.8
Medial parabrachial nucleus
nTPM: 171.4
2156 Male, age 61, both hemispheres 296.5
2854 Male, age 80, both hemispheres 208.9
2786 Male, age 76, both hemispheres 155.9
2170 Female, age 91, both hemispheres 121.6
2463 Female, age 85, right hemisphere 74.2
Medial periolivary nuclei
nTPM: 253.1
2171 Female, age 85, both hemispheres 420.8
2063 Male, age 76, both hemispheres 308.1
2791 Male, age 74, right hemisphere 225.2
2458 Female, age 91, both hemispheres 171.8
2081 Male, age 80, both hemispheres 139.5
Medial vestibular nucleus
nTPM: 289.5
2134 Male, age 76, both hemispheres 354.5
2624 Male, age 61, both hemispheres 344.3
2093 Male, age 80, both hemispheres 309.0
2803 Female, age 91, both hemispheres 278.7
2801 Male, age 74, both hemispheres 248.9
2743 Female, age 85, both hemispheres 201.8
Motor facial nucleus
nTPM: 252.0
2062 Male, age 76, both hemispheres 328.9
2365 Male, age 74, right hemisphere 290.8
2697 Female, age 85, both hemispheres 253.2
2327 Male, age 80, both hemispheres 251.7
2126 Male, age 61, both hemispheres 209.3
2795 Female, age 91, both hemispheres 178.0
Motor hypoglossal nucleus
nTPM: 248.6
2461 Male, age 61, both hemispheres 381.1
2132 Female, age 85, both hemispheres 320.6
2125 Female, age 91, both hemispheres 306.8
2182 Male, age 80, both hemispheres 174.5
2277 Male, age 76, both hemispheres 59.8
Motor trigeminal nucleus
nTPM: 198.9
2079 Male, age 80, both hemispheres 241.3
2560 Male, age 74, both hemispheres 226.5
2335 Male, age 61, both hemispheres 191.7
2309 Male, age 76, both hemispheres 183.9
2321 Female, age 91, both hemispheres 151.2
Nuclei of the trapezoid body
nTPM: 301.2
2159 Male, age 61, both hemispheres 434.2
2735 Female, age 85, both hemispheres 376.7
1983 Male, age 76, both hemispheres 296.8
2166 Male, age 80, both hemispheres 214.5
2368 Female, age 91, both hemispheres 183.9
Nucleus ambiguus
nTPM: 179.5
2096 Female, age 85, both hemispheres 286.7
2071 Male, age 76, both hemispheres 72.3
Nucleus cuneatus
nTPM: 164.6
2131 Male, age 76, both hemispheres 312.0
2100 Male, age 76, both hemispheres 307.3
2564 Male, age 74, both hemispheres 176.2
2376 Male, age 61, both hemispheres 161.0
2381 Male, age 80, both hemispheres 124.1
2562 Male, age 61, both hemispheres 123.7
2805 Female, age 91, both hemispheres 98.3
2808 Female, age 85, both hemispheres 97.5
2380 Male, age 80, both hemispheres 81.5
Nucleus gracilis
nTPM: 82.0
2627 Male, age 74, both hemispheres 100.9
2299 Female, age 85, both hemispheres 74.1
2382 Male, age 80, both hemispheres 71.1
Nucleus raphe magnus
nTPM: 318.6
2160 Male, age 61, both hemispheres 458.5
2172 Female, age 85, both hemispheres 444.6
2455 Male, age 74, both hemispheres 347.8
2328 Male, age 80, both hemispheres 240.4
2051 Male, age 76, both hemispheres 225.2
2459 Female, age 91, both hemispheres 195.5
Nucleus raphe obscurus
nTPM: 91.4
2800 Male, age 61, midline 116.6
2845 Female, age 85, midline 114.6
2142 Male, age 76, midline 43.2
Nucleus raphe pallidus
nTPM: 100.5
2183 Male, age 80, midline 136.9
1924 Male, age 61, midline 110.2
2145 Male, age 76, midline 54.5
Nucleus tractus solitarii
nTPM: 156.3
2144 Female, age 91, right hemisphere 255.7
2191 Female, age 85, both hemispheres 193.9
2307 Male, age 80, both hemispheres 89.2
2656 Male, age 76, both hemispheres 86.6
Paramedian reticular nucleus
nTPM: 220.8
2050 Female, age 85, both hemispheres 297.4
2057 Male, age 80, both hemispheres 239.4
2313 Male, age 61, both hemispheres 212.4
2052 Male, age 76, both hemispheres 134.2
Parvicellular reticular nuclei
nTPM: 239.3
2558 Male, age 74, both hemispheres 321.8
2095 Male, age 76, both hemispheres 215.3
2119 Male, age 80, both hemispheres 180.8
Parvicellular reticular nuclei, medullary
nTPM: 265.8
2091 Female, age 85, both hemispheres 342.0
2189 Female, age 91, both hemispheres 279.3
2181 Male, age 80, left hemisphere 176.0
Pedunculopontine tegmental nucleus
nTPM: 132.6
2334 Male, age 80, both hemispheres 145.7
2338 Male, age 61, both hemispheres 137.4
1921 Female, age 85, both hemispheres 114.7
Peritrigeminal nucleus
nTPM: 216.1
2179 Male, age 61, both hemispheres 224.8
2136 Male, age 76, both hemispheres 217.3
2067 Female, age 85, both hemispheres 206.1
Pontine nuclei
nTPM: 285.4
2787 Female, age 85, both hemispheres 443.9
2727 Male, age 61, right hemisphere 407.0
1863 Male, age 55, unknown 316.2
1968 Male, age 76, left hemisphere 299.7
2109 Female, age 72, unknown 249.2
2454 Male, age 74, left hemisphere 240.9
2115 Male, age 80, left hemisphere 183.2
2319 Female, age 91, both hemispheres 143.1
Pontine raphe nucleus
nTPM: 179.6
2122 Female, age 85, midline 277.2
2853 Male, age 76, midline 81.9
Posteroventral cochlear nucleus
nTPM: 159.4
2752 Female, age 85, both hemispheres 252.1
2371 Male, age 61, both hemispheres 171.0
2070 Male, age 76, both hemispheres 169.4
2341 Male, age 80, both hemispheres 129.7
2135 Female, age 91, both hemispheres 74.7
Prepositus hypoglossal nucleus
nTPM: 196.5
2855 Female, age 85, right hemisphere 249.0
2086 Male, age 80, both hemispheres 144.0
Principal sensory trigeminal nucleus
nTPM: 290.8
2158 Male, age 61, both hemispheres 384.3
2324 Male, age 76, both hemispheres 362.3
2008 Male, age 80, left hemisphere 253.2
2367 Female, age 91, left hemisphere 163.4
Reticular pontine nucleus, caudal
nTPM: 199.6
2332 Male, age 80, right hemisphere 288.8
2092 Male, age 76, both hemispheres 212.7
2457 Female, age 91, both hemispheres 149.8
2559 Male, age 74, both hemispheres 147.2
Reticular pontine nucleus, oral
nTPM: 170.6
2361 Male, age 74, both hemispheres 269.0
2012 Female, age 85, both hemispheres 210.7
2366 Female, age 91, both hemispheres 153.1
1939 Male, age 80, both hemispheres 117.5
2167 Male, age 76, both hemispheres 103.0
Reticulotegmental nucleus
nTPM: 195.5
2322 Female, age 91, both hemispheres 201.2
2333 Male, age 80, both hemispheres 200.0
2325 Male, age 76, both hemispheres 191.3
2452 Male, age 74, both hemispheres 189.5
Spinal trigeminal nucleus, caudal
nTPM: 244.4
2390 Female, age 91, both hemispheres 528.5
2447 Male, age 76, both hemispheres 290.9
2308 Male, age 80, both hemispheres 142.9
2312 Male, age 61, both hemispheres 136.7
2642 Male, age 74, both hemispheres 123.2
Spinal trigeminal nucleus, interpolar
nTPM: 368.7
2625 Male, age 61, both hemispheres 905.8
2066 Male, age 76, right hemisphere 294.1
2033 Male, age 80, both hemispheres 225.2
2386 Female, age 85, both hemispheres 210.8
2389 Female, age 91, both hemispheres 207.7
Spinal trigeminal nucleus, oral
nTPM: 289.0
2164 Male, age 80, both hemispheres 376.6
2737 Female, age 85, both hemispheres 338.1
1978 Male, age 76, both hemispheres 152.4
Spinal vestibular nucleus
nTPM: 224.1
2186 Female, age 91, both hemispheres 277.0
2796 Male, age 61, both hemispheres 242.1
2780 Male, age 80, both hemispheres 241.7
2806 Female, age 85, both hemispheres 234.7
2748 Male, age 76, both hemispheres 211.7
2384 Male, age 74, both hemispheres 137.1
Subcoeruleus area
nTPM: 162.9
1958 Male, age 80, both hemispheres 217.9
2089 Male, age 76, left hemisphere 208.5
2323 Female, age 91, left hemisphere 185.7
2451 Male, age 74, both hemispheres 123.1
2369 Female, age 85, left hemisphere 79.2
Superior olive
nTPM: 229.4
1875 Female, age 85, both hemispheres 312.3
2329 Male, age 80, right hemisphere 226.6
2364 Male, age 74, right hemisphere 223.2
2561 Female, age 91, both hemispheres 198.4
2020 Male, age 76, both hemispheres 186.2
Superior vestibular nucleus
nTPM: 133.0
2015 Male, age 80, both hemispheres 185.3
2061 Male, age 76, both hemispheres 119.1
2383 Male, age 74, both hemispheres 94.7
Ventral medullary reticular nucleus
nTPM: 136.1
2060 Male, age 76, both hemispheres 181.8
2372 Male, age 61, both hemispheres 90.4
Ventral periolivary nuclei
nTPM: 263.3
2130 Female, age 85, both hemispheres 366.9
2165 Male, age 80, both hemispheres 292.2
2794 Female, age 91, left hemisphere 233.3
2023 Male, age 76, both hemispheres 160.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 174.5
2741 Female, age 85, both hemispheres 258.1
1986 Male, age 76, both hemispheres 247.1
2302 Female, age 91, both hemispheres 143.9
2180 Male, age 61, both hemispheres 116.3
2118 Male, age 80, both hemispheres 106.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 205.2
2449 Male, age 74, both hemispheres 313.8
2840 Female, age 85, both hemispheres 283.2
1959 Male, age 76, both hemispheres 210.1
2161 Male, age 80, both hemispheres 187.1
2456 Female, age 91, both hemispheres 143.1
2359 Male, age 61, both hemispheres 93.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 310.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 155.2
FF:10182-103D2 60 years, female 242.6
FF:10165-103B3 76 years, female 67.8
Medulla oblongata
Scaled Tags Per Million: 93.4
FF:10038-101F2 18-64 years, mixed 129.9
FF:10174-103C3 60 years, female 83.3
FF:10155-103A2 76 years, female 66.9
Pons
Scaled Tags Per Million: 310.6
FF:10033-101E6 18-54 years, mixed 310.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 235.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 224.5
Samples: 4

Max nTPM: 295.0
Min nTPM: 92.6
Sample A Female 236.9
Sample B Female 295.0
Sample C Male 273.3
Sample D Male 92.6
Pons
nTPM: 235.5
Samples: 4

Max nTPM: 410.7
Min nTPM: 135.3
Sample A Female 208.6
Sample B Female 135.3
Sample C Male 187.3
Sample D Male 410.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 608.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 608.6
Samples: 4

Max nTPM: 654.3
Min nTPM: 571.9
Sample A Male 586.6
Sample B Male 654.3
Sample C Female 571.9
Sample D Female 621.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 16.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 16.4
75651233 Antisense, RP_060518_01_D11, Mouse strain C57BL/6J (56 days, male) 17.8
69262346 Antisense, RP_050303_02_C04, Mouse strain C57BL/6J (56 days, male) 15.0
Pons
Expression energy: 13.6
75651233 Antisense, RP_060518_01_D11, Mouse strain C57BL/6J (56 days, male) 15.2
69262346 Antisense, RP_050303_02_C04, Mouse strain C57BL/6J (56 days, male) 12.0

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