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SLC39A5
HPA
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TISSUE LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:167.0 nTPM
HPA:156.9 nTPM
GTEx:167.0 nTPM
FANTOM5:77.7 Scaled Tags Per Million

LIVER - Annotated protein expression
Pending normal tissue analysis

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

156.9
N/A
Female, age 60
Liver sample 21
nTPM: 217
overview
Male, age 54
Liver sample 23
nTPM: 157
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 140.9
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 54.5
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 79.8
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 132.9
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 136
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 204.6
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 162.1
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 284.5
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

167.0
GTEx sample id Sample description nTPM
Liver
Average nTPM: 167.0
Samples: 226

Max nTPM: 392.0
Min nTPM: 1.0
Std nTPM: 93.4
Median nTPM: 170.2
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 392.0
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 384.8
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 373.2
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 349.3
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 342.7
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 341.3
GTEX-18A7A-1526-SM-72D69 50-59 years, female 340.9
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 330.6
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 328.6
GTEX-14JG1-1626-SM-664NH 40-49 years, male 327.6
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 327.2
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 327.2
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 317.1
GTEX-RN64-1826-SM-48FDV 50-59 years, male 313.7
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 312.8
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 301.7
GTEX-14E7W-1526-SM-6871X 70-79 years, male 296.8
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 294.3
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 294.2
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 293.8
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 292.8
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 292.7
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 289.3
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 289.0
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 288.9
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 280.8
GTEX-QESD-2026-SM-447BI 20-29 years, male 280.1
GTEX-11ZUS-2526-SM-59872 30-39 years, male 276.0
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 275.8
GTEX-18465-1626-SM-7LG6N 50-59 years, male 274.4
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 274.0
GTEX-144GL-1426-SM-79OMA 50-59 years, male 270.8
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 268.4
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 265.0
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 264.3
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 263.3
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 263.0
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 260.3
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 259.3
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 258.3
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 256.7
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 256.3
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 255.5
GTEX-17F96-1226-SM-79OK2 70-79 years, male 255.0
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 254.2
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 253.6
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 250.7
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 248.2
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 248.0
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 247.5
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 245.7
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 244.8
GTEX-P78B-1326-SM-3P611 40-49 years, female 243.6
GTEX-13112-1426-SM-5EGH8 50-59 years, male 242.6
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 241.7
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 240.3
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 234.9
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 234.6
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 232.5
GTEX-17HHE-0126-SM-79398 50-59 years, male 231.8
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 231.8
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 230.9
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 230.5
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 230.2
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 229.6
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 229.4
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 229.1
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 227.4
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 227.0
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 226.3
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 226.2
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 223.2
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 222.4
GTEX-1399T-0826-SM-5IFES 60-69 years, male 222.0
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 221.5
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 219.6
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 216.4
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 216.3
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 216.0
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 215.2
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 215.1
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 212.9
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 212.2
GTEX-1B933-1226-SM-731DW 50-59 years, female 211.7
GTEX-R53T-0326-SM-48FEC 50-59 years, female 211.6
GTEX-YECK-1926-SM-4W21H 60-69 years, male 211.2
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 210.9
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 208.5
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 208.2
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 206.9
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 204.5
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 204.0
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 202.7
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 202.7
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 201.9
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 199.7
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 199.0
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 194.4
GTEX-13113-1326-SM-5GCOI 60-69 years, female 194.0
GTEX-11GSP-0626-SM-5986T 60-69 years, female 193.0
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 192.5
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 190.1
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 188.7
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 187.9
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 186.5
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 182.8
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 178.6
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 172.8
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 172.1
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 171.5
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 171.3
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 171.2
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 170.3
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 170.1
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 168.8
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 166.3
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 164.0
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 160.7
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 157.9
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 156.9
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 155.2
GTEX-RU72-1426-SM-46MUF 50-59 years, female 154.7
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 153.9
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 153.3
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 151.5
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 147.8
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 147.3
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 147.0
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 142.5
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 142.4
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 142.2
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 140.9
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 136.5
GTEX-12696-0826-SM-5EGGE 60-69 years, male 136.2
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 135.5
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 132.6
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 130.1
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 126.4
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 124.9
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 124.7
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 121.2
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 120.9
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 120.6
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 119.0
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 118.6
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 118.1
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 118.0
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 116.4
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 115.6
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 115.3
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 114.1
GTEX-X261-1726-SM-4PQYT 50-59 years, male 112.5
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 110.5
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 109.6
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 109.3
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 109.1
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 107.6
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 105.3
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 105.2
GTEX-14PHX-0526-SM-664NW 50-59 years, male 104.1
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 103.2
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 101.3
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 94.9
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 94.6
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 93.7
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 93.7
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 92.0
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 91.5
GTEX-Q734-0326-SM-48U15 40-49 years, female 88.9
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 88.2
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 87.9
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 87.6
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 87.5
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 85.6
GTEX-REY6-1226-SM-48FDR 60-69 years, male 84.0
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 84.0
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 81.7
GTEX-QEL4-1226-SM-447A4 50-59 years, male 78.5
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 76.9
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 76.5
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 76.4
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 73.1
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 71.8
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 71.1
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 71.1
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 70.4
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 64.4
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 61.0
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 60.3
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 58.4
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 57.3
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 56.2
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 55.7
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 54.5
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 52.5
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 49.2
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 49.1
GTEX-18A66-2026-SM-7189C 60-69 years, male 48.6
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 47.8
GTEX-S33H-1626-SM-4AD68 30-39 years, male 47.1
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 47.1
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 46.5
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 42.0
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 40.7
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 40.1
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 34.1
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 33.3
GTEX-1B932-1426-SM-793AN 40-49 years, female 33.2
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 29.7
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 29.2
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 27.7
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 25.3
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 23.2
GTEX-O5YV-0726-SM-EV798 60-69 years, female 20.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 19.8
GTEX-14PJO-1726-SM-68719 60-69 years, male 16.5
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 14.2
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 14.1
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 12.3
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 12.0
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 9.2
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 9.1
GTEX-S32W-1926-SM-4AD63 50-59 years, female 8.4
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 7.9
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 6.0
GTEX-14XAO-0226-SM-68728 60-69 years, female 1.0
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

77.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 77.7
FF:10018-101C9 64,69,70 years, mixed 77.7

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