PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:545.5 nTPM
FANTOM5:317.4 Scaled Tags Per Million
Pig:167.3 nTPM
Mouse:87.6 nTPM
Allen mouse:14.2 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 545.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 432.5
2188 Female, age 91, both hemispheres 542.3
2090 Male, age 80, both hemispheres 477.3
2301 Female, age 85, both hemispheres 469.2
1984 Male, age 76, both hemispheres 241.3
Area postrema
nTPM: 444.7
2306 Male, age 80, both hemispheres 556.8
2799 Male, age 61, both hemispheres 493.4
2054 Male, age 76, both hemispheres 284.0
Dorsal cochlear nucleus
nTPM: 405.8
2187 Female, age 91, both hemispheres 441.6
2378 Male, age 80, both hemispheres 436.6
2058 Male, age 76, both hemispheres 403.4
2802 Male, age 74, right hemisphere 386.8
2370 Male, age 61, both hemispheres 360.6
Dorsal medullary reticular nucleus
nTPM: 403.0
2088 Male, age 76, both hemispheres 434.7
2373 Male, age 61, both hemispheres 402.0
2040 Female, age 85, both hemispheres 372.3
Dorsal motor vagal complex
nTPM: 345.4
2185 Male, age 76, both hemispheres 574.9
2797 Male, age 61, both hemispheres 491.3
2807 Female, age 85, both hemispheres 353.8
2643 Male, age 74, both hemispheres 299.3
2000 Male, age 74, unknown 289.2
2133 Female, age 91, both hemispheres 285.3
2813 Female, age 72, unknown 263.1
2844 Male, age 55, unknown 206.4
Dorsal tegmental nucleus
nTPM: 351.2
2083 Male, age 80, both hemispheres 441.2
2326 Male, age 74, both hemispheres 379.6
1936 Male, age 76, left hemisphere 294.2
2358 Male, age 61, both hemispheres 289.7
Dorsolateral tegmental area
nTPM: 349.6
2751 Female, age 85, both hemispheres 493.8
2654 Male, age 80, both hemispheres 438.8
2337 Male, age 61, both hemispheres 377.2
2360 Male, age 74, both hemispheres 246.0
2141 Male, age 76, both hemispheres 192.0
Gigantocellular reticular nuclei, medullary
nTPM: 418.6
2314 Male, age 61, both hemispheres 535.7
2387 Female, age 91, both hemispheres 520.9
1876 Female, age 85, both hemispheres 441.7
2022 Male, age 76, right hemisphere 397.8
2310 Male, age 80, both hemispheres 374.8
2462 Male, age 74, both hemispheres 240.8
Gigantocellular reticular nuclei, pars
nTPM: 344.6
2336 Male, age 61, both hemispheres 387.2
2330 Male, age 80, both hemispheres 382.5
2706 Male, age 80, both hemispheres 378.0
2084 Female, age 85, both hemispheres 328.0
2168 Male, age 76, both hemispheres 247.3
Inferior olive
nTPM: 410.3
2178 Male, age 61, both hemispheres 484.9
2628 Female, age 91, both hemispheres 444.5
2379 Male, age 80, both hemispheres 430.3
2085 Female, age 85, both hemispheres 370.7
2563 Male, age 74, both hemispheres 321.0
Kolliker-Fuse nucleus
nTPM: 389.4
2793 Female, age 91, left hemisphere 580.4
2163 Male, age 80, both hemispheres 354.5
2315 Male, age 76, right hemisphere 233.2
Lateral lemniscal nuclei
nTPM: 364.6
2320 Female, age 91, left hemisphere 475.6
2036 Male, age 80, both hemispheres 385.6
2746 Female, age 85, left hemisphere 345.5
2453 Male, age 74, right hemisphere 332.5
2169 Male, age 76, both hemispheres 283.8
Lateral medullary reticular nucleus
nTPM: 431.9
2852 Male, age 80, both hemispheres 486.0
2374 Male, age 61, both hemispheres 457.0
2190 Female, age 85, both hemispheres 438.4
2305 Male, age 74, both hemispheres 422.4
2804 Female, age 91, both hemispheres 396.7
2044 Male, age 76, both hemispheres 390.7
Lateral parabrachial nucleus
nTPM: 401.1
2792 Male, age 76, both hemispheres 557.9
2013 Male, age 80, both hemispheres 412.4
2790 Male, age 61, both hemispheres 370.5
2139 Female, age 85, right hemisphere 263.7
Lateral vestibular nucleus
nTPM: 367.9
2311 Male, age 80, both hemispheres 408.3
2184 Male, age 76, both hemispheres 327.4
Locus coeruleus
nTPM: 216.4
2720 Male, age 74, both hemispheres 312.0
2162 Male, age 80, both hemispheres 273.1
2317 Female, age 72, unknown 221.2
2788 Male, age 74, unknown 211.9
2014 Male, age 55, unknown 191.9
2123 Female, age 91, both hemispheres 172.5
1980 Male, age 76, both hemispheres 132.0
Medial olivary nucleus
nTPM: 541.6
1943 Male, age 61, both hemispheres 644.5
1962 Male, age 76, both hemispheres 582.9
2851 Male, age 80, both hemispheres 472.4
2138 Female, age 91, both hemispheres 466.8
Medial parabrachial nucleus
nTPM: 395.9
2170 Female, age 91, both hemispheres 464.6
2854 Male, age 80, both hemispheres 431.1
2463 Female, age 85, right hemisphere 405.8
2786 Male, age 76, both hemispheres 352.7
2156 Male, age 61, both hemispheres 325.4
Medial periolivary nuclei
nTPM: 353.1
2081 Male, age 80, both hemispheres 462.2
2458 Female, age 91, both hemispheres 453.6
2791 Male, age 74, right hemisphere 328.6
2063 Male, age 76, both hemispheres 287.5
2171 Female, age 85, both hemispheres 233.4
Medial vestibular nucleus
nTPM: 351.7
2803 Female, age 91, both hemispheres 478.5
2624 Male, age 61, both hemispheres 409.7
2093 Male, age 80, both hemispheres 392.2
2801 Male, age 74, both hemispheres 375.1
2743 Female, age 85, both hemispheres 258.6
2134 Male, age 76, both hemispheres 196.2
Motor facial nucleus
nTPM: 364.4
2697 Female, age 85, both hemispheres 459.4
2126 Male, age 61, both hemispheres 405.3
2795 Female, age 91, both hemispheres 379.4
2365 Male, age 74, right hemisphere 346.1
2327 Male, age 80, both hemispheres 339.6
2062 Male, age 76, both hemispheres 256.6
Motor hypoglossal nucleus
nTPM: 357.1
2132 Female, age 85, both hemispheres 440.2
2182 Male, age 80, both hemispheres 420.5
2125 Female, age 91, both hemispheres 413.2
2461 Male, age 61, both hemispheres 293.4
2277 Male, age 76, both hemispheres 218.2
Motor trigeminal nucleus
nTPM: 371.5
2321 Female, age 91, both hemispheres 461.3
2309 Male, age 76, both hemispheres 395.5
2560 Male, age 74, both hemispheres 384.1
2079 Male, age 80, both hemispheres 321.3
2335 Male, age 61, both hemispheres 295.5
Nuclei of the trapezoid body
nTPM: 312.3
2166 Male, age 80, both hemispheres 419.9
2368 Female, age 91, both hemispheres 408.8
1983 Male, age 76, both hemispheres 265.2
2159 Male, age 61, both hemispheres 263.2
2735 Female, age 85, both hemispheres 204.6
Nucleus ambiguus
nTPM: 399.3
2071 Male, age 76, both hemispheres 564.7
2096 Female, age 85, both hemispheres 233.8
Nucleus cuneatus
nTPM: 451.0
2380 Male, age 80, both hemispheres 642.1
2808 Female, age 85, both hemispheres 563.1
2381 Male, age 80, both hemispheres 515.6
2376 Male, age 61, both hemispheres 462.7
2100 Male, age 76, both hemispheres 440.9
2805 Female, age 91, both hemispheres 426.9
2131 Male, age 76, both hemispheres 345.8
2562 Male, age 61, both hemispheres 339.0
2564 Male, age 74, both hemispheres 323.2
Nucleus gracilis
nTPM: 537.3
2382 Male, age 80, both hemispheres 722.4
2299 Female, age 85, both hemispheres 503.7
2627 Male, age 74, both hemispheres 385.9
Nucleus raphe magnus
nTPM: 319.7
2459 Female, age 91, both hemispheres 476.7
2051 Male, age 76, both hemispheres 390.5
2328 Male, age 80, both hemispheres 382.7
2455 Male, age 74, both hemispheres 291.6
2172 Female, age 85, both hemispheres 195.4
2160 Male, age 61, both hemispheres 181.3
Nucleus raphe obscurus
nTPM: 545.5
2845 Female, age 85, midline 595.0
2142 Male, age 76, midline 575.6
2800 Male, age 61, midline 465.9
Nucleus raphe pallidus
nTPM: 519.2
2145 Male, age 76, midline 651.6
1924 Male, age 61, midline 513.3
2183 Male, age 80, midline 392.8
Nucleus tractus solitarii
nTPM: 231.5
2656 Male, age 76, both hemispheres 273.0
2144 Female, age 91, right hemisphere 249.5
2191 Female, age 85, both hemispheres 204.4
2307 Male, age 80, both hemispheres 199.2
Paramedian reticular nucleus
nTPM: 400.1
2052 Male, age 76, both hemispheres 565.2
2057 Male, age 80, both hemispheres 376.4
2050 Female, age 85, both hemispheres 346.4
2313 Male, age 61, both hemispheres 312.5
Parvicellular reticular nuclei
nTPM: 376.6
2095 Male, age 76, both hemispheres 419.3
2119 Male, age 80, both hemispheres 396.1
2558 Male, age 74, both hemispheres 314.4
Parvicellular reticular nuclei, medullary
nTPM: 330.8
2189 Female, age 91, both hemispheres 358.8
2181 Male, age 80, left hemisphere 332.5
2091 Female, age 85, both hemispheres 301.2
Pedunculopontine tegmental nucleus
nTPM: 358.9
2338 Male, age 61, both hemispheres 408.1
2334 Male, age 80, both hemispheres 374.8
1921 Female, age 85, both hemispheres 293.7
Peritrigeminal nucleus
nTPM: 380.5
2136 Male, age 76, both hemispheres 404.4
2067 Female, age 85, both hemispheres 371.2
2179 Male, age 61, both hemispheres 365.9
Pontine nuclei
nTPM: 389.3
2319 Female, age 91, both hemispheres 564.1
2454 Male, age 74, left hemisphere 504.9
2109 Female, age 72, unknown 412.9
2115 Male, age 80, left hemisphere 390.9
1863 Male, age 55, unknown 381.8
1968 Male, age 76, left hemisphere 342.4
2727 Male, age 61, right hemisphere 270.8
2787 Female, age 85, both hemispheres 246.5
Pontine raphe nucleus
nTPM: 281.7
2122 Female, age 85, midline 293.6
2853 Male, age 76, midline 269.8
Posteroventral cochlear nucleus
nTPM: 490.2
2135 Female, age 91, both hemispheres 614.0
2341 Male, age 80, both hemispheres 597.2
2070 Male, age 76, both hemispheres 489.3
2371 Male, age 61, both hemispheres 456.1
2752 Female, age 85, both hemispheres 294.4
Prepositus hypoglossal nucleus
nTPM: 320.5
2855 Female, age 85, right hemisphere 424.0
2086 Male, age 80, both hemispheres 217.0
Principal sensory trigeminal nucleus
nTPM: 338.4
2367 Female, age 91, left hemisphere 526.1
2324 Male, age 76, both hemispheres 307.8
2008 Male, age 80, left hemisphere 289.5
2158 Male, age 61, both hemispheres 230.0
Reticular pontine nucleus, caudal
nTPM: 410.9
2457 Female, age 91, both hemispheres 529.8
2559 Male, age 74, both hemispheres 450.0
2092 Male, age 76, both hemispheres 357.8
2332 Male, age 80, right hemisphere 306.1
Reticular pontine nucleus, oral
nTPM: 445.3
2366 Female, age 91, both hemispheres 596.2
1939 Male, age 80, both hemispheres 438.7
2361 Male, age 74, both hemispheres 403.5
2167 Male, age 76, both hemispheres 402.2
2012 Female, age 85, both hemispheres 386.2
Reticulotegmental nucleus
nTPM: 358.3
2322 Female, age 91, both hemispheres 436.4
2452 Male, age 74, both hemispheres 384.5
2333 Male, age 80, both hemispheres 371.7
2325 Male, age 76, both hemispheres 240.6
Spinal trigeminal nucleus, caudal
nTPM: 398.5
2312 Male, age 61, both hemispheres 500.9
2308 Male, age 80, both hemispheres 416.8
2447 Male, age 76, both hemispheres 388.7
2390 Female, age 91, both hemispheres 367.0
2642 Male, age 74, both hemispheres 319.3
Spinal trigeminal nucleus, interpolar
nTPM: 334.7
2389 Female, age 91, both hemispheres 389.6
2386 Female, age 85, both hemispheres 365.9
2033 Male, age 80, both hemispheres 346.3
2625 Male, age 61, both hemispheres 286.2
2066 Male, age 76, right hemisphere 285.4
Spinal trigeminal nucleus, oral
nTPM: 327.9
1978 Male, age 76, both hemispheres 365.3
2164 Male, age 80, both hemispheres 364.1
2737 Female, age 85, both hemispheres 254.4
Spinal vestibular nucleus
nTPM: 416.2
2748 Male, age 76, both hemispheres 494.5
2806 Female, age 85, both hemispheres 454.3
2384 Male, age 74, both hemispheres 448.0
2186 Female, age 91, both hemispheres 392.2
2796 Male, age 61, both hemispheres 389.5
2780 Male, age 80, both hemispheres 318.8
Subcoeruleus area
nTPM: 371.0
2369 Female, age 85, left hemisphere 591.0
1958 Male, age 80, both hemispheres 353.8
2451 Male, age 74, both hemispheres 337.9
2089 Male, age 76, left hemisphere 303.2
2323 Female, age 91, left hemisphere 268.9
Superior olive
nTPM: 383.4
2020 Male, age 76, both hemispheres 429.4
2561 Female, age 91, both hemispheres 416.0
2329 Male, age 80, right hemisphere 405.9
2364 Male, age 74, right hemisphere 342.6
1875 Female, age 85, both hemispheres 322.9
Superior vestibular nucleus
nTPM: 294.3
2015 Male, age 80, both hemispheres 355.3
2061 Male, age 76, both hemispheres 265.3
2383 Male, age 74, both hemispheres 262.4
Ventral medullary reticular nucleus
nTPM: 472.2
2372 Male, age 61, both hemispheres 479.8
2060 Male, age 76, both hemispheres 464.7
Ventral periolivary nuclei
nTPM: 347.4
2023 Male, age 76, both hemispheres 466.0
2794 Female, age 91, left hemisphere 370.7
2165 Male, age 80, both hemispheres 325.8
2130 Female, age 85, both hemispheres 227.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 397.3
2118 Male, age 80, both hemispheres 488.2
2180 Male, age 61, both hemispheres 416.2
2302 Female, age 91, both hemispheres 380.4
1986 Male, age 76, both hemispheres 362.6
2741 Female, age 85, both hemispheres 339.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 394.0
2456 Female, age 91, both hemispheres 467.5
2840 Female, age 85, both hemispheres 421.0
2359 Male, age 61, both hemispheres 388.8
1959 Male, age 76, both hemispheres 382.2
2161 Male, age 80, both hemispheres 381.6
2449 Male, age 74, both hemispheres 322.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 317.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 267.3
FF:10165-103B3 76 years, female 297.9
FF:10182-103D2 60 years, female 236.8
Medulla oblongata
Scaled Tags Per Million: 256.5
FF:10038-101F2 18-64 years, mixed 344.1
FF:10155-103A2 76 years, female 249.4
FF:10174-103C3 60 years, female 176.0
Pons
Scaled Tags Per Million: 317.4
FF:10033-101E6 18-54 years, mixed 317.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 167.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 167.3
Samples: 4

Max nTPM: 209.8
Min nTPM: 132.0
Sample A Female 158.6
Sample B Female 132.0
Sample C Male 168.7
Sample D Male 209.8
Pons
nTPM: 112.0
Samples: 4

Max nTPM: 163.0
Min nTPM: 79.4
Sample A Female 79.4
Sample B Female 92.4
Sample C Male 113.2
Sample D Male 163.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 87.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 87.6
Samples: 4

Max nTPM: 100.7
Min nTPM: 76.1
Sample A Male 82.9
Sample B Male 90.7
Sample C Female 76.1
Sample D Female 100.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 14.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.5
68080699 Antisense, RP_040929_01_F07, Mouse strain C57BL/6J (56 days, male) 13.5
Pons
Expression energy: 14.2
68080699 Antisense, RP_040929_01_F07, Mouse strain C57BL/6J (56 days, male) 14.2

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