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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:148.4 nTPM
HPA Brain:427.4 nTPM
GTEx:148.4 nTPM
FANTOM5:994.4 Scaled Tags Per Million
Pig:172.2 nTPM
Mouse:977.9 nTPM
Allen mouse:27.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044249Antibody CAB002745
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

427.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 145.3
1781 Male, age 74, unknown 216.9
2846 Female, age 79, unknown 162.1
1857 Female, age 85, left hemisphere 154.1
1854 Male, age 80, left hemisphere 148.0
2288 Male, age 75, left hemisphere 143.1
2290 Female, age 72, unknown 130.0
2289 Male, age 61, right hemisphere 116.7
2481 Female, age 94, left hemisphere 91.6
Globus pallidus, externus
nTPM: 74.8
2772 Female, age 79, unknown 117.2
2395 Male, age 75, both hemispheres 96.8
2646 Male, age 61, right hemisphere 60.7
1996 Male, age 80, right hemisphere 55.5
2567 Female, age 72, unknown 43.8
Globus pallidus, internus
nTPM: 82.8
2287 Male, age 75, right hemisphere 136.1
2778 Female, age 91, both hemispheres 101.8
1818 Male, age 74, unknown 88.7
2483 Female, age 94, right hemisphere 81.4
2566 Female, age 72, unknown 70.2
2037 Male, age 80, right hemisphere 56.6
2111 Female, age 85, right hemisphere 44.6
Nucleus accumbens
nTPM: 183.8
1856 Female, age 91, right hemisphere 325.4
2824 Male, age 61, right hemisphere 209.1
1783 Male, age 74, unknown 203.1
2698 Female, age 72, unknown 197.8
1806 Female, age 85, left hemisphere 172.4
2732 Male, age 80, right hemisphere 137.9
2286 Male, age 75, left hemisphere 136.0
2391 Female, age 94, left hemisphere 88.7
Nucleus basalis of Meynert
nTPM: 114.2
2821 Male, age 75, both hemispheres 153.7
2393 Male, age 80, right hemisphere 126.0
2484 Female, age 94, left hemisphere 121.3
2569 Male, age 61, both hemispheres 55.9
Nucleus of the diagonal band
nTPM: 427.4
1812 Female, age 91, both hemispheres 558.6
2775 Male, age 80, right hemisphere 501.9
2029 Male, age 61, right hemisphere 461.3
2195 Female, age 85, both hemispheres 377.6
1979 Male, age 74, unknown 237.7
Putamen
nTPM: 134.2
1937 Female, age 91, right hemisphere 193.7
1838 Male, age 80, right hemisphere 187.8
2466 Female, age 79, unknown 153.0
1829 Male, age 74, unknown 130.4
2647 Male, age 75, left hemisphere 109.6
2482 Female, age 94, left hemisphere 89.0
2489 Female, age 72, unknown 75.8
Septal nuclei
nTPM: 336.6
2031 Female, age 72, unknown 560.5
1960 Male, age 74, unknown 455.9
2009 Female, age 91, both hemispheres 425.0
2629 Female, age 94, right hemisphere 407.7
2059 Female, age 85, both hemispheres 186.2
2394 Male, age 61, left hemisphere 175.8
2199 Male, age 80, right hemisphere 144.9
Stria terminalis, bed nucleus
nTPM: 397.2
1974 Female, age 91, both hemispheres 544.6
2486 Female, age 94, both hemispheres 428.6
2201 Male, age 74, unknown 218.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 85.4
Samples: 246

Max nTPM: 525.6
Min nTPM: 9.9
Std nTPM: 60.9
Median nTPM: 75.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 525.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 260.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 231.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 228.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 221.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 220.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 218.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 212.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 204.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 204.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 204.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 196.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 193.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 192.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 192.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 190.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 188.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 186.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 182.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 178.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 175.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 173.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 170.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 169.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 166.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 157.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 156.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 155.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 154.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 154.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 154.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 153.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 152.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 152.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 151.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 149.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 146.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 146.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 145.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 143.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 143.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 142.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 139.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 139.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 138.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 137.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 135.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 130.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 130.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 126.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 125.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 125.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 123.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 123.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 118.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 118.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 115.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 115.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 114.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 112.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 111.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 111.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 110.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 110.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 108.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 108.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 106.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 105.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 105.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 105.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 104.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 103.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 103.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 102.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 101.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 101.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 100.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 100.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 100.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 99.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 98.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 98.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 97.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 96.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 96.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 96.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 96.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 96.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 95.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 95.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 94.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 94.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 94.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 93.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 92.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 91.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 91.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 91.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 90.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 89.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 88.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 87.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 87.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 86.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 86.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 86.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 85.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 85.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 85.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 85.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 84.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 84.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 81.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 80.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 80.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 79.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 79.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 78.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 77.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 77.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 77.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 77.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 75.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 75.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 73.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 72.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 72.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 72.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 71.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 71.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 71.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 71.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 71.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 69.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 69.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 69.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 66.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 66.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 64.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 63.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 63.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 61.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 61.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 61.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 60.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 60.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 59.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 58.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 57.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 57.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 56.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 56.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 54.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 53.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 51.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 51.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 50.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 50.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 50.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 49.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 49.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 49.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 48.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 47.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 47.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 46.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 46.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 46.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 45.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 45.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 45.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 44.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 44.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 44.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 44.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 43.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 41.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 40.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 40.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 39.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 39.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 38.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 38.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 38.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 37.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 37.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 37.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 36.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 35.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 35.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 34.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 33.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 32.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 31.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 31.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 30.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 30.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 30.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 30.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 29.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 29.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 29.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 28.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 28.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 28.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 28.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 27.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 27.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 26.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 25.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 25.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 25.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 25.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 25.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 25.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 25.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 24.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 22.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 22.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 22.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 22.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 21.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 21.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 20.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 20.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 19.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 19.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 18.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 18.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 18.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 17.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 17.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 17.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 16.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 16.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 16.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 16.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 15.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 15.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 14.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 9.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 148.4
Samples: 246

Max nTPM: 417.9
Min nTPM: 11.7
Std nTPM: 93.6
Median nTPM: 148.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 417.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 393.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 370.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 368.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 367.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 360.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 358.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 349.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 345.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 335.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 327.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 316.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 316.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 313.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 312.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 305.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 304.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 297.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 297.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 292.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 290.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 284.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 282.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 281.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 276.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 275.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 273.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 272.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 270.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 270.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 265.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 264.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 260.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 255.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 253.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 252.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 248.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 247.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 245.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 245.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 244.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 241.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 241.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 240.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 240.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 239.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 237.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 237.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 236.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 236.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 233.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 231.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 227.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 226.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 222.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 221.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 220.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 216.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 215.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 211.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 211.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 209.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 207.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 206.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 206.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 204.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 202.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 202.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 196.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 193.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 193.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 191.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 190.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 190.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 189.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 189.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 189.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 187.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 187.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 185.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 184.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 184.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 183.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 182.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 182.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 182.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 179.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 179.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 177.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 176.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 176.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 174.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 174.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 174.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 174.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 174.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 173.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 173.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 171.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 171.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 171.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 170.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 165.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 165.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 164.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 164.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 164.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 163.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 162.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 161.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 161.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 158.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 157.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 157.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 156.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 155.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 155.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 154.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 154.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 154.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 151.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 151.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 149.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 147.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 147.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 144.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 139.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 139.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 137.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 136.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 134.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 133.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 132.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 132.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 132.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 129.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 127.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 125.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 125.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 125.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 124.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 122.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 117.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 117.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 117.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 115.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 112.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 109.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 109.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 107.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 105.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 104.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 104.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 104.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 101.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 101.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 98.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 97.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 95.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 95.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 94.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 93.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 91.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 91.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 87.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 83.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 80.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 80.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 79.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 78.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 78.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 76.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 74.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 74.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 73.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 73.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 73.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 72.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 70.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 70.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 66.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 65.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 64.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 64.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 64.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 63.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 63.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 62.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 62.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 62.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 59.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 58.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 58.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 58.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 56.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 56.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 56.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 55.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 53.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 52.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 52.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 51.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 47.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 46.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 44.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 43.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 41.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 41.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 39.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 38.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 37.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 36.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 36.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 36.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 35.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 34.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 33.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 32.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 32.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 30.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 29.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 29.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 28.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 26.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 26.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 25.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 25.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 25.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 24.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 24.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 23.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 22.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 21.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 21.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 20.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 19.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 19.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 16.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 16.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 16.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 14.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 14.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 12.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 11.7
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Brain - Putamen (basal ganglia)
Average nTPM: 70.0
Samples: 205

Max nTPM: 230.3
Min nTPM: 3.5
Std nTPM: 52.1
Median nTPM: 56.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 230.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 219.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 210.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 206.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 200.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 196.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 187.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 177.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 176.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 171.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 166.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 166.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 165.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 162.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 162.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 160.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 158.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 156.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 154.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 150.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 150.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 149.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 149.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 149.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 148.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 143.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 143.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 140.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 136.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 135.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 134.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 131.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 131.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 130.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 129.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 122.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 121.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 120.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 120.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 119.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 118.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 117.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 117.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 116.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 114.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 112.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 111.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 106.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 106.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 106.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 104.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 103.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 102.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 102.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 101.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 101.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 95.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 94.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 94.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 93.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 91.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 89.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 84.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 84.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 81.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 80.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 80.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 79.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 79.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 77.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 76.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 76.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 76.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 75.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 74.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 73.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 73.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 71.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 69.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 68.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 68.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 68.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 67.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 66.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 65.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 64.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 64.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 64.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 64.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 63.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 63.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 63.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 62.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 61.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 59.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 59.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 59.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 58.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 58.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 57.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 57.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 57.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 56.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 55.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 55.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 54.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 54.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 53.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 53.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 53.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 52.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 52.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 49.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 48.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 47.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 47.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 47.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 45.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 45.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 44.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 42.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 42.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 40.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 40.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 40.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 39.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 39.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 37.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 37.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 36.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 36.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 36.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 35.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 34.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 34.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 33.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 33.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 32.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 32.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 32.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 32.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 32.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 32.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 31.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 31.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 30.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 30.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 29.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 29.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 29.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 28.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 28.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 28.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 26.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 26.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 26.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 26.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 25.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 25.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 24.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 23.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 23.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 23.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 23.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 23.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 23.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 23.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 22.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 22.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 21.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 20.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 20.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 20.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 19.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 19.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 19.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 19.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 18.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 17.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 16.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 16.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 15.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 15.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 14.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 14.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 14.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 13.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 13.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 13.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 13.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 12.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 11.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 10.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 9.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 9.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 8.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 5.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

994.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 521.8
FF:10164-103B2 76 years, female 521.8
Nucleus accumbens
Scaled Tags Per Million: 994.4
FF:10037-101F1 23-56 years, mixed 994.4
Putamen
Scaled Tags Per Million: 784.2
FF:10176-103C5 60 years, female 784.2
Globus pallidus
Scaled Tags Per Million: 219.0
FF:10175-103C4 60 years, female 276.2
FF:10161-103A8 76 years, female 161.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.2
Pig sample Sample description nTPM
Caudate
nTPM: 153.2
Samples: 4

Max nTPM: 167.6
Min nTPM: 134.4
Sample A Female 147.8
Sample B Female 163.1
Sample C Male 167.6
Sample D Male 134.4
Putamen
nTPM: 139.7
Samples: 4

Max nTPM: 177.6
Min nTPM: 117.0
Sample A Female 117.0
Sample B Female 126.7
Sample C Male 177.6
Sample D Male 137.5
Septum
nTPM: 172.2
Samples: 4

Max nTPM: 261.7
Min nTPM: 115.8
Sample A Female 157.5
Sample B Female 153.8
Sample C Male 261.7
Sample D Male 115.8
Ventral pallidum
nTPM: 153.3
Samples: 4

Max nTPM: 214.4
Min nTPM: 118.3
Sample A Female 118.3
Sample B Female 155.9
Sample C Male 214.4
Sample D Male 124.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

977.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 745.0
Samples: 4

Max nTPM: 832.9
Min nTPM: 669.7
Sample A Male 744.8
Sample B Male 832.9
Sample C Female 669.7
Sample D Female 732.6
Septum
nTPM: 919.1
Samples: 4

Max nTPM: 1009.5
Min nTPM: 798.9
Sample A Male 1009.5
Sample B Male 927.6
Sample C Female 940.3
Sample D Female 798.9
Ventral forebrain
nTPM: 978.0
Samples: 4

Max nTPM: 1033.6
Min nTPM: 939.0
Sample A Male 939.0
Sample B Male 968.3
Sample C Female 1033.6
Sample D Female 970.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

27.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 27.5
68193013 Antisense, RP_040928_01_C01, Mouse strain C57BL/6J (56 days, male) 30.4
70928293 Antisense, RP_050725_02_C08, Mouse strain C57BL/6J (56 days, male) 24.7
Pallidum
Expression energy: 25.7
68193013 Antisense, RP_040928_01_C01, Mouse strain C57BL/6J (56 days, male) 27.8
70928293 Antisense, RP_050725_02_C08, Mouse strain C57BL/6J (56 days, male) 23.5

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