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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:48.7 nTPM
HPA Brain:66.9 nTPM
GTEx:48.7 nTPM
FANTOM5:113.4 Scaled Tags Per Million
Pig:46.5 nTPM
Mouse:64.3 nTPM
Allen mouse:1.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA005573
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 66.9
1854 Male, age 80, left hemisphere 89.4
2289 Male, age 61, right hemisphere 80.8
2846 Female, age 79, unknown 76.0
2481 Female, age 94, left hemisphere 74.7
1781 Male, age 74, unknown 64.6
2290 Female, age 72, unknown 60.0
1857 Female, age 85, left hemisphere 53.1
2288 Male, age 75, left hemisphere 36.3
Globus pallidus, externus
nTPM: 44.2
2772 Female, age 79, unknown 56.9
1996 Male, age 80, right hemisphere 49.7
2395 Male, age 75, both hemispheres 44.3
2567 Female, age 72, unknown 40.2
2646 Male, age 61, right hemisphere 29.8
Globus pallidus, internus
nTPM: 47.8
2483 Female, age 94, right hemisphere 57.2
1818 Male, age 74, unknown 53.2
2566 Female, age 72, unknown 52.7
2287 Male, age 75, right hemisphere 50.5
2037 Male, age 80, right hemisphere 49.7
2778 Female, age 91, both hemispheres 39.5
2111 Female, age 85, right hemisphere 31.8
Nucleus accumbens
nTPM: 54.7
1856 Female, age 91, right hemisphere 84.5
2698 Female, age 72, unknown 61.8
1783 Male, age 74, unknown 59.1
2732 Male, age 80, right hemisphere 53.5
2391 Female, age 94, left hemisphere 50.0
1806 Female, age 85, left hemisphere 49.8
2286 Male, age 75, left hemisphere 40.2
2824 Male, age 61, right hemisphere 39.0
Nucleus basalis of Meynert
nTPM: 57.4
2393 Male, age 80, right hemisphere 85.6
2821 Male, age 75, both hemispheres 56.7
2484 Female, age 94, left hemisphere 56.5
2569 Male, age 61, both hemispheres 30.9
Nucleus of the diagonal band
nTPM: 58.0
1812 Female, age 91, both hemispheres 72.2
2775 Male, age 80, right hemisphere 61.4
2195 Female, age 85, both hemispheres 60.1
1979 Male, age 74, unknown 52.7
2029 Male, age 61, right hemisphere 43.8
Putamen
nTPM: 65.8
1838 Male, age 80, right hemisphere 85.8
2482 Female, age 94, left hemisphere 81.0
2466 Female, age 79, unknown 74.2
1937 Female, age 91, right hemisphere 63.3
2489 Female, age 72, unknown 61.3
1829 Male, age 74, unknown 57.1
2647 Male, age 75, left hemisphere 38.0
Septal nuclei
nTPM: 62.8
1960 Male, age 74, unknown 75.3
2394 Male, age 61, left hemisphere 74.3
2031 Female, age 72, unknown 66.8
2009 Female, age 91, both hemispheres 63.2
2629 Female, age 94, right hemisphere 59.5
2199 Male, age 80, right hemisphere 57.2
2059 Female, age 85, both hemispheres 43.4
Stria terminalis, bed nucleus
nTPM: 57.0
1974 Female, age 91, both hemispheres 62.6
2486 Female, age 94, both hemispheres 56.7
2201 Male, age 74, unknown 51.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 42.6
Samples: 246

Max nTPM: 262.8
Min nTPM: 15.3
Std nTPM: 28.4
Median nTPM: 35.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 262.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 222.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 167.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 152.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 150.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 130.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 127.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 122.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 103.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 98.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 97.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 87.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 85.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 85.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 84.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 83.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 77.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 76.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 75.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 74.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 73.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 70.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 67.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 65.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 65.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 65.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 62.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 62.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 59.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 58.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 58.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 57.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 57.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 56.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 56.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 53.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 50.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 50.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 50.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 49.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 49.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 49.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 49.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 48.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 48.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 47.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 46.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 46.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 46.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 45.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 45.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 45.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 45.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 45.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 44.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 44.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 43.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 43.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 43.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 43.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 43.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 42.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 42.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 42.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 42.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 42.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 42.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 42.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 41.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 41.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 41.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 40.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 40.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 40.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 40.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 40.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 40.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 40.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 40.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 40.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 39.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 39.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 39.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 39.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 39.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 38.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 38.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 38.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 38.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 38.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 38.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 38.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 38.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 37.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 37.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 37.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 37.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 37.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 37.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 37.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 37.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 37.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 37.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 37.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 37.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 37.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 37.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 36.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 36.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 36.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 36.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 36.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 36.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 36.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 36.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 35.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 35.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 35.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 35.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 35.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 35.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 35.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 35.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 35.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 34.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 34.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 34.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 34.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 34.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 33.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 33.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 33.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 33.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 33.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 33.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 33.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 33.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 33.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 33.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 32.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 32.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 32.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 32.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 32.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 32.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 32.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 32.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 32.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 32.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 31.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 31.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 31.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 31.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 31.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 31.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 31.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 31.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 31.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 31.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 30.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 30.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 30.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 30.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 30.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 29.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 29.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 29.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 29.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 29.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 29.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 29.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 28.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 28.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 28.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 28.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 28.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 28.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 28.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 28.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 28.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 28.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 28.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 28.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 28.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 27.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 27.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 27.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 27.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 27.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 27.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 27.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 27.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 27.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 26.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 26.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 26.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 26.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 26.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 26.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 26.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 26.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 26.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 25.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 25.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 25.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 25.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 25.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 25.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 25.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 25.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 25.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 25.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 25.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 25.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 24.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 24.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 24.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 24.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 24.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 24.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 24.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 23.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 23.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 23.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 22.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 22.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 22.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 22.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 22.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 22.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 21.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 21.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 20.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 19.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 19.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 18.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 17.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 15.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 48.7
Samples: 246

Max nTPM: 483.9
Min nTPM: 19.2
Std nTPM: 43.0
Median nTPM: 40.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 483.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 408.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 208.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 182.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 180.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 117.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 116.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 113.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 112.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 111.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 96.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 93.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 90.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 81.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 78.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 78.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 75.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 74.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 72.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 72.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 71.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 70.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 70.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 69.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 66.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 66.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 66.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 64.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 62.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 62.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 61.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 61.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 61.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 60.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 59.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 57.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 57.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 57.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 56.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 56.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 56.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 55.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 55.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 54.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 53.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 53.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 53.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 53.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 53.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 52.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 52.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 52.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 52.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 52.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 51.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 51.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 51.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 51.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 51.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 51.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 51.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 51.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 50.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 50.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 50.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 49.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 49.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 48.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 48.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 48.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 48.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 48.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 47.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 47.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 47.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 47.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 47.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 47.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 47.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 47.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 46.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 46.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 46.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 46.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 45.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 45.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 45.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 45.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 45.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 45.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 45.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 44.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 44.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 44.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 44.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 44.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 44.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 44.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 43.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 43.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 43.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 43.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 43.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 43.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 43.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 43.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 42.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 42.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 42.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 42.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 41.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 41.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 41.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 41.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 41.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 41.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 41.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 41.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 41.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 40.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 40.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 40.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 40.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 40.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 40.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 39.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 39.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 39.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 39.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 39.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 39.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 39.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 39.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 39.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 39.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 39.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 39.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 39.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 38.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 38.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 38.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 38.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 38.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 38.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 37.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 37.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 37.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 37.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 37.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 37.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 37.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 37.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 36.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 36.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 36.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 36.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 36.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 36.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 36.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 35.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 35.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 35.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 35.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 35.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 34.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 34.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 34.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 34.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 34.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 34.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 34.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 34.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 34.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 34.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 33.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 33.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 33.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 33.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 33.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 33.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 33.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 33.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 33.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 33.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 33.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 32.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 32.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 32.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 32.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 32.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 32.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 32.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 32.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 31.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 31.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 31.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 31.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 30.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 30.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 30.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 30.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 30.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 30.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 30.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 30.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 30.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 30.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 30.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 30.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 29.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 29.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 29.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 28.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 28.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 28.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 28.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 27.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 27.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 27.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 27.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 27.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 26.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 26.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 26.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 25.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 25.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 25.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 25.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 24.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 24.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 23.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 23.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 23.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 23.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 22.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 22.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 22.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 21.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 21.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 21.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 21.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 20.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 19.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 19.2
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Brain - Putamen (basal ganglia)
Average nTPM: 44.4
Samples: 205

Max nTPM: 300.3
Min nTPM: 15.2
Std nTPM: 31.5
Median nTPM: 35.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 300.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 236.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 173.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 163.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 144.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 143.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 104.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 97.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 94.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 94.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 82.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 82.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 75.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 72.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 72.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 72.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 68.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 68.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 67.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 66.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 66.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 65.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 64.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 63.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 61.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 61.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 59.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 57.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 55.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 55.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 55.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 55.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 54.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 53.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 52.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 52.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 51.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 51.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 50.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 49.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 49.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 49.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 49.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 49.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 49.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 49.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 48.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 48.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 48.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 47.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 46.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 46.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 45.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 45.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 45.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 45.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 45.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 44.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 44.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 44.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 44.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 44.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 43.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 43.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 43.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 42.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 42.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 42.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 41.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 41.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 41.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 41.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 41.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 41.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 41.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 41.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 41.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 40.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 40.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 40.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 40.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 40.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 39.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 39.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 39.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 39.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 39.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 39.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 38.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 38.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 38.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 38.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 38.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 37.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 37.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 37.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 36.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 36.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 36.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 36.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 35.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 35.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 35.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 35.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 35.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 35.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 35.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 35.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 35.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 35.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 35.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 34.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 34.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 34.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 34.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 34.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 34.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 33.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 33.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 33.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 33.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 33.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 33.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 33.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 33.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 33.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 33.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 33.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 33.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 32.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 32.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 32.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 32.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 32.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 32.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 31.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 31.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 31.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 31.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 31.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 31.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 31.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 31.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 31.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 30.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 30.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 30.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 30.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 30.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 30.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 30.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 30.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 30.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 29.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 29.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 29.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 29.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 29.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 29.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 29.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 29.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 28.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 28.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 28.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 28.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 28.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 28.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 28.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 28.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 28.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 27.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 27.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 27.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 27.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 27.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 26.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 26.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 26.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 26.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 26.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 26.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 26.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 25.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 25.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 25.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 25.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 24.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 24.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 23.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 23.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 22.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 22.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 22.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 20.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 19.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 19.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 19.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 18.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 18.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 17.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 17.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 15.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

113.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 101.5
FF:10164-103B2 76 years, female 101.5
Nucleus accumbens
Scaled Tags Per Million: 102.9
FF:10037-101F1 23-56 years, mixed 102.9
Putamen
Scaled Tags Per Million: 113.4
FF:10176-103C5 60 years, female 113.4
Globus pallidus
Scaled Tags Per Million: 88.5
FF:10175-103C4 60 years, female 114.5
FF:10161-103A8 76 years, female 62.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.5
Pig sample Sample description nTPM
Caudate
nTPM: 41.7
Samples: 4

Max nTPM: 49.7
Min nTPM: 35.3
Sample A Female 35.3
Sample B Female 44.1
Sample C Male 49.7
Sample D Male 37.8
Putamen
nTPM: 46.5
Samples: 4

Max nTPM: 59.8
Min nTPM: 37.6
Sample A Female 37.6
Sample B Female 40.2
Sample C Male 59.8
Sample D Male 48.5
Septum
nTPM: 39.2
Samples: 4

Max nTPM: 46.4
Min nTPM: 35.5
Sample A Female 36.5
Sample B Female 38.5
Sample C Male 46.4
Sample D Male 35.5
Ventral pallidum
nTPM: 41.8
Samples: 4

Max nTPM: 49.6
Min nTPM: 36.9
Sample A Female 36.9
Sample B Female 43.7
Sample C Male 49.6
Sample D Male 36.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 55.8
Samples: 4

Max nTPM: 57.8
Min nTPM: 53.7
Sample A Male 53.7
Sample B Male 57.8
Sample C Female 55.0
Sample D Female 56.6
Septum
nTPM: 64.3
Samples: 4

Max nTPM: 65.9
Min nTPM: 63.4
Sample A Male 63.5
Sample B Male 65.9
Sample C Female 64.5
Sample D Female 63.4
Ventral forebrain
nTPM: 61.0
Samples: 4

Max nTPM: 62.2
Min nTPM: 59.2
Sample A Male 59.2
Sample B Male 61.7
Sample C Female 62.2
Sample D Female 60.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.6
70919722 Antisense, RP_050713_01_H11, Mouse strain C57BL/6J (56 days, male) 1.8
67978474 Antisense, RP_040923_01_B11, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 1.8
70919722 Antisense, RP_050713_01_H11, Mouse strain C57BL/6J (56 days, male) 1.8
67978474 Antisense, RP_040923_01_B11, Mouse strain C57BL/6J (56 days, male) 1.7

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