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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:100.3 nTPM
HPA Brain:58.2 nTPM
GTEx:100.3 nTPM
FANTOM5:29.3 Scaled Tags Per Million
Pig:37.9 nTPM
Mouse:87.8 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041368Antibody HPA057079
Glial cells MediumHigh
Neuronal cells MediumHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 37.5
2481 Female, age 94, left hemisphere 46.0
2288 Male, age 75, left hemisphere 45.9
1854 Male, age 80, left hemisphere 39.5
2846 Female, age 79, unknown 38.7
2290 Female, age 72, unknown 37.6
1857 Female, age 85, left hemisphere 33.0
2289 Male, age 61, right hemisphere 31.0
1781 Male, age 74, unknown 28.1
Globus pallidus, externus
nTPM: 58.2
1996 Male, age 80, right hemisphere 69.7
2646 Male, age 61, right hemisphere 59.5
2567 Female, age 72, unknown 56.8
2772 Female, age 79, unknown 53.4
2395 Male, age 75, both hemispheres 51.9
Globus pallidus, internus
nTPM: 57.8
1818 Male, age 74, unknown 64.9
2287 Male, age 75, right hemisphere 64.3
2483 Female, age 94, right hemisphere 61.0
2111 Female, age 85, right hemisphere 58.1
2566 Female, age 72, unknown 52.5
2037 Male, age 80, right hemisphere 52.3
2778 Female, age 91, both hemispheres 51.6
Nucleus accumbens
nTPM: 35.9
2286 Male, age 75, left hemisphere 43.6
2698 Female, age 72, unknown 39.8
2824 Male, age 61, right hemisphere 36.4
1856 Female, age 91, right hemisphere 36.1
2391 Female, age 94, left hemisphere 35.6
1806 Female, age 85, left hemisphere 34.5
2732 Male, age 80, right hemisphere 32.2
1783 Male, age 74, unknown 28.6
Nucleus basalis of Meynert
nTPM: 43.8
2569 Male, age 61, both hemispheres 61.9
2393 Male, age 80, right hemisphere 41.5
2821 Male, age 75, both hemispheres 36.5
2484 Female, age 94, left hemisphere 35.3
Nucleus of the diagonal band
nTPM: 28.8
1979 Male, age 74, unknown 31.9
1812 Female, age 91, both hemispheres 31.4
2775 Male, age 80, right hemisphere 30.7
2195 Female, age 85, both hemispheres 25.6
2029 Male, age 61, right hemisphere 24.4
Putamen
nTPM: 38.4
1829 Male, age 74, unknown 42.3
2489 Female, age 72, unknown 41.9
2647 Male, age 75, left hemisphere 39.0
2482 Female, age 94, left hemisphere 38.9
1937 Female, age 91, right hemisphere 36.8
1838 Male, age 80, right hemisphere 36.3
2466 Female, age 79, unknown 33.7
Septal nuclei
nTPM: 30.5
2394 Male, age 61, left hemisphere 42.6
2199 Male, age 80, right hemisphere 39.8
2059 Female, age 85, both hemispheres 30.3
2009 Female, age 91, both hemispheres 28.2
1960 Male, age 74, unknown 25.3
2629 Female, age 94, right hemisphere 23.6
2031 Female, age 72, unknown 23.4
Stria terminalis, bed nucleus
nTPM: 27.8
2201 Male, age 74, unknown 33.8
1974 Female, age 91, both hemispheres 27.5
2486 Female, age 94, both hemispheres 22.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 80.3
Samples: 246

Max nTPM: 275.1
Min nTPM: 32.6
Std nTPM: 37.6
Median nTPM: 72.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 275.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 240.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 224.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 222.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 212.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 178.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 174.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 170.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 169.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 167.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 149.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 148.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 145.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 144.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 143.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 143.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 142.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 142.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 140.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 137.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 135.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 134.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 133.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 131.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 131.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 130.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 130.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 125.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 124.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 121.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 120.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 117.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 116.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 116.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 114.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 113.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 112.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 109.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 107.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 106.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 106.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 105.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 104.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 102.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 102.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 101.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 101.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 101.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 100.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 97.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 97.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 97.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 97.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 96.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 96.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 96.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 96.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 95.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 95.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 95.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 95.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 95.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 94.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 94.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 93.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 93.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 90.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 90.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 90.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 90.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 90.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 90.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 89.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 89.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 88.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 88.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 88.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 87.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 87.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 87.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 85.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 84.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 84.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 83.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 83.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 82.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 82.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 82.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 82.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 81.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 80.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 80.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 80.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 80.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 79.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 79.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 78.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 78.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 77.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 77.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 76.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 76.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 76.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 76.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 76.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 75.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 75.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 75.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 75.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 75.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 75.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 75.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 74.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 74.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 74.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 73.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 73.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 73.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 73.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 73.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 72.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 72.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 72.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 72.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 71.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 71.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 71.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 71.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 71.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 71.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 70.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 69.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 69.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 69.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 69.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 68.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 68.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 67.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 67.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 67.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 67.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 66.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 66.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 66.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 65.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 64.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 64.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 64.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 64.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 63.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 63.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 63.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 62.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 62.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 62.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 61.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 61.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 61.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 61.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 61.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 61.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 61.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 60.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 60.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 60.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 59.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 59.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 59.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 58.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 57.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 57.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 56.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 56.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 55.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 55.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 55.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 55.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 55.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 54.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 54.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 54.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 54.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 54.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 53.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 53.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 53.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 52.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 51.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 50.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 49.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 48.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 48.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 48.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 48.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 48.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 48.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 48.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 47.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 47.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 47.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 47.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 47.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 47.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 47.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 47.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 46.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 45.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 45.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 45.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 44.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 44.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 44.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 43.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 43.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 43.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 43.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 42.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 42.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 42.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 42.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 42.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 41.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 41.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 40.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 40.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 38.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 38.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 38.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 38.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 38.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 37.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 35.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 35.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 35.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 35.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 32.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 78.4
Samples: 246

Max nTPM: 318.5
Min nTPM: 22.9
Std nTPM: 43.3
Median nTPM: 67.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 318.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 314.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 264.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 186.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 184.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 184.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 182.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 180.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 175.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 172.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 162.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 156.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 156.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 154.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 147.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 147.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 145.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 141.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 141.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 139.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 139.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 139.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 135.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 134.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 134.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 131.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 130.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 129.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 128.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 126.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 124.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 123.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 122.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 119.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 118.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 118.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 117.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 117.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 116.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 115.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 113.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 112.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 111.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 111.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 110.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 109.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 108.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 108.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 107.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 107.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 106.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 106.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 105.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 104.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 103.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 103.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 103.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 102.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 101.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 99.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 96.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 94.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 92.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 92.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 92.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 92.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 91.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 91.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 90.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 90.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 89.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 87.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 87.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 86.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 86.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 85.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 85.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 84.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 84.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 82.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 81.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 81.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 81.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 80.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 79.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 78.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 77.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 77.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 77.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 77.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 77.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 76.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 76.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 76.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 75.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 75.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 75.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 75.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 74.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 74.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 74.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 73.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 73.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 73.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 73.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 73.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 73.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 72.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 72.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 72.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 72.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 72.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 72.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 71.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 71.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 71.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 70.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 70.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 68.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 68.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 67.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 67.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 67.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 66.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 66.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 66.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 65.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 65.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 65.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 64.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 64.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 64.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 63.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 62.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 62.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 61.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 61.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 61.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 61.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 60.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 60.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 59.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 59.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 59.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 59.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 59.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 58.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 58.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 58.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 58.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 57.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 57.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 57.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 57.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 56.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 56.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 55.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 55.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 55.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 54.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 53.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 53.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 52.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 52.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 52.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 51.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 51.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 51.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 51.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 51.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 51.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 50.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 50.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 50.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 50.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 50.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 50.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 50.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 49.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 49.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 49.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 49.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 49.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 48.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 48.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 48.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 48.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 47.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 47.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 47.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 47.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 46.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 46.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 46.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 46.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 45.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 45.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 45.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 45.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 45.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 45.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 44.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 44.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 44.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 44.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 44.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 44.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 43.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 43.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 43.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 43.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 42.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 42.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 42.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 42.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 41.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 41.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 41.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 40.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 40.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 40.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 40.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 39.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 39.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 39.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 38.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 37.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 37.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 36.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 35.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 35.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 34.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 34.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 34.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 34.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 33.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 33.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 30.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 29.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 29.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 26.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 25.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 24.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 22.9
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Brain - Putamen (basal ganglia)
Average nTPM: 100.3
Samples: 205

Max nTPM: 411.8
Min nTPM: 29.9
Std nTPM: 49.0
Median nTPM: 89.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 411.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 274.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 267.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 261.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 239.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 233.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 232.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 199.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 196.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 187.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 186.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 180.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 178.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 176.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 173.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 166.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 164.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 163.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 162.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 155.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 154.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 154.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 152.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 151.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 147.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 146.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 146.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 145.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 144.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 142.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 142.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 141.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 141.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 138.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 136.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 135.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 132.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 132.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 130.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 129.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 129.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 128.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 128.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 128.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 127.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 125.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 124.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 124.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 123.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 122.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 121.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 120.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 119.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 119.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 118.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 115.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 115.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 112.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 112.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 112.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 111.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 110.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 108.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 107.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 107.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 106.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 106.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 106.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 106.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 105.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 104.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 104.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 103.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 103.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 102.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 102.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 101.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 101.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 99.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 99.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 99.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 98.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 98.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 96.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 96.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 96.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 95.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 95.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 94.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 94.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 94.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 92.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 92.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 92.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 92.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 91.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 90.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 90.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 90.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 89.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 89.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 89.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 89.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 88.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 88.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 88.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 88.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 88.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 87.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 87.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 86.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 85.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 85.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 84.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 83.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 83.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 82.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 81.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 81.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 81.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 81.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 80.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 80.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 80.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 79.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 78.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 78.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 78.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 78.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 78.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 77.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 76.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 76.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 76.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 76.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 75.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 75.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 74.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 73.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 73.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 72.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 72.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 72.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 71.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 71.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 70.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 70.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 70.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 69.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 69.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 69.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 69.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 69.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 68.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 68.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 67.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 66.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 66.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 66.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 66.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 66.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 65.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 64.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 64.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 64.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 64.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 62.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 62.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 61.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 61.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 60.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 59.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 59.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 58.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 58.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 58.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 57.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 57.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 57.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 56.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 56.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 56.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 55.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 54.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 54.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 54.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 53.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 52.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 50.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 50.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 50.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 50.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 50.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 50.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 48.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 47.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 47.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 45.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 45.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 41.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 40.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 39.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 37.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 29.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

29.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 19.4
FF:10164-103B2 76 years, female 19.4
Nucleus accumbens
Scaled Tags Per Million: 25.4
FF:10037-101F1 23-56 years, mixed 25.4
Putamen
Scaled Tags Per Million: 23.8
FF:10176-103C5 60 years, female 23.8
Globus pallidus
Scaled Tags Per Million: 29.3
FF:10161-103A8 76 years, female 29.6
FF:10175-103C4 60 years, female 29.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.9
Pig sample Sample description nTPM
Caudate
nTPM: 28.7
Samples: 4

Max nTPM: 32.3
Min nTPM: 22.3
Sample A Female 32.3
Sample B Female 29.8
Sample C Male 30.2
Sample D Male 22.3
Putamen
nTPM: 36.4
Samples: 4

Max nTPM: 47.9
Min nTPM: 26.9
Sample A Female 47.9
Sample B Female 26.9
Sample C Male 41.2
Sample D Male 29.6
Septum
nTPM: 38.0
Samples: 4

Max nTPM: 41.8
Min nTPM: 33.0
Sample A Female 41.8
Sample B Female 33.0
Sample C Male 40.0
Sample D Male 37.0
Ventral pallidum
nTPM: 34.1
Samples: 4

Max nTPM: 40.4
Min nTPM: 27.4
Sample A Female 31.7
Sample B Female 37.0
Sample C Male 40.4
Sample D Male 27.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 62.7
Samples: 4

Max nTPM: 65.5
Min nTPM: 58.9
Sample A Male 58.9
Sample B Male 65.1
Sample C Female 61.1
Sample D Female 65.5
Septum
nTPM: 87.8
Samples: 4

Max nTPM: 95.4
Min nTPM: 82.7
Sample A Male 82.7
Sample B Male 95.4
Sample C Female 86.0
Sample D Female 86.9
Ventral forebrain
nTPM: 67.4
Samples: 4

Max nTPM: 70.1
Min nTPM: 62.6
Sample A Male 67.3
Sample B Male 70.1
Sample C Female 69.5
Sample D Female 62.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
69015500 Antisense, RP_050315_01_B03, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
69015500 Antisense, RP_050315_01_B03, Mouse strain C57BL/6J (56 days, male) 0.0

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