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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:202.7 nTPM
HPA Brain:222.0 nTPM
GTEx:202.7 nTPM
FANTOM5:187.6 Scaled Tags Per Million
Pig:109.8 nTPM
Mouse:303.4 nTPM
Allen mouse:10.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA021407Antibody CAB010005
Glial cells Not detectedNot detected
Neuronal cells LowMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

222.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 222.0
2290 Female, age 72, unknown 262.9
1857 Female, age 85, left hemisphere 250.2
2846 Female, age 79, unknown 247.2
1854 Male, age 80, left hemisphere 236.3
1781 Male, age 74, unknown 232.5
2289 Male, age 61, right hemisphere 193.4
2481 Female, age 94, left hemisphere 177.3
2288 Male, age 75, left hemisphere 176.2
Globus pallidus, externus
nTPM: 189.6
1996 Male, age 80, right hemisphere 198.3
2646 Male, age 61, right hemisphere 197.6
2395 Male, age 75, both hemispheres 197.2
2567 Female, age 72, unknown 186.3
2772 Female, age 79, unknown 168.6
Globus pallidus, internus
nTPM: 186.7
2287 Male, age 75, right hemisphere 203.5
2566 Female, age 72, unknown 199.2
2111 Female, age 85, right hemisphere 193.0
2483 Female, age 94, right hemisphere 189.6
2037 Male, age 80, right hemisphere 185.1
2778 Female, age 91, both hemispheres 171.0
1818 Male, age 74, unknown 165.5
Nucleus accumbens
nTPM: 220.2
1783 Male, age 74, unknown 273.8
2698 Female, age 72, unknown 260.3
1806 Female, age 85, left hemisphere 254.2
1856 Female, age 91, right hemisphere 234.8
2824 Male, age 61, right hemisphere 206.8
2286 Male, age 75, left hemisphere 179.9
2732 Male, age 80, right hemisphere 177.9
2391 Female, age 94, left hemisphere 174.2
Nucleus basalis of Meynert
nTPM: 198.4
2821 Male, age 75, both hemispheres 213.2
2569 Male, age 61, both hemispheres 211.6
2393 Male, age 80, right hemisphere 198.2
2484 Female, age 94, left hemisphere 170.5
Nucleus of the diagonal band
nTPM: 220.3
2195 Female, age 85, both hemispheres 251.4
2775 Male, age 80, right hemisphere 225.7
1812 Female, age 91, both hemispheres 223.5
2029 Male, age 61, right hemisphere 205.0
1979 Male, age 74, unknown 195.9
Putamen
nTPM: 212.7
1838 Male, age 80, right hemisphere 239.7
2647 Male, age 75, left hemisphere 219.2
1829 Male, age 74, unknown 215.7
2489 Female, age 72, unknown 213.8
2466 Female, age 79, unknown 207.9
1937 Female, age 91, right hemisphere 206.0
2482 Female, age 94, left hemisphere 186.6
Septal nuclei
nTPM: 218.2
1960 Male, age 74, unknown 275.9
2629 Female, age 94, right hemisphere 229.2
2059 Female, age 85, both hemispheres 224.8
2031 Female, age 72, unknown 221.9
2394 Male, age 61, left hemisphere 210.2
2199 Male, age 80, right hemisphere 185.5
2009 Female, age 91, both hemispheres 180.0
Stria terminalis, bed nucleus
nTPM: 196.7
1974 Female, age 91, both hemispheres 213.4
2201 Male, age 74, unknown 192.2
2486 Female, age 94, both hemispheres 184.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

202.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 181.5
Samples: 246

Max nTPM: 306.6
Min nTPM: 76.2
Std nTPM: 40.8
Median nTPM: 180.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 306.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 296.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 281.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 274.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 271.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 267.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 264.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 264.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 263.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 258.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 258.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 256.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 253.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 251.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 249.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 248.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 246.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 245.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 244.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 240.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 240.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 238.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 238.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 238.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 233.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 232.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 231.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 230.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 229.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 228.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 225.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 224.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 224.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 224.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 223.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 222.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 222.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 222.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 221.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 221.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 220.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 220.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 219.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 218.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 218.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 218.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 217.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 215.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 215.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 214.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 214.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 213.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 213.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 213.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 213.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 213.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 212.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 212.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 211.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 211.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 211.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 210.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 209.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 209.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 209.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 209.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 208.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 208.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 208.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 207.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 203.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 203.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 202.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 202.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 202.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 201.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 201.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 200.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 199.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 199.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 198.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 196.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 196.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 196.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 195.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 194.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 194.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 194.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 194.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 193.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 193.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 193.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 193.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 192.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 191.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 191.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 191.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 190.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 190.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 190.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 190.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 189.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 189.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 189.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 189.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 189.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 189.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 189.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 189.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 189.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 188.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 187.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 187.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 186.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 186.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 184.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 184.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 184.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 183.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 182.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 182.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 181.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 180.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 180.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 179.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 179.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 178.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 177.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 176.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 176.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 175.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 175.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 174.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 174.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 174.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 174.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 174.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 173.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 173.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 172.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 171.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 171.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 168.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 168.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 168.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 168.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 168.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 167.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 167.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 167.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 167.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 166.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 165.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 165.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 165.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 165.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 163.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 162.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 162.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 162.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 162.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 161.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 161.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 161.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 161.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 160.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 160.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 159.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 159.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 158.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 158.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 158.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 156.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 155.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 155.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 155.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 154.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 154.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 153.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 153.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 151.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 151.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 150.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 150.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 150.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 150.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 150.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 150.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 150.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 149.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 149.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 148.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 148.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 148.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 148.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 147.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 147.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 147.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 147.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 146.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 145.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 144.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 144.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 144.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 143.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 143.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 143.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 142.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 141.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 140.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 139.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 139.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 138.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 137.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 135.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 135.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 135.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 134.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 133.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 131.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 129.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 128.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 128.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 127.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 126.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 125.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 124.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 123.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 123.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 122.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 120.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 118.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 116.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 116.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 116.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 116.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 115.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 113.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 112.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 106.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 103.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 103.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 101.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 101.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 91.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 76.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 202.7
Samples: 246

Max nTPM: 339.9
Min nTPM: 69.7
Std nTPM: 43.2
Median nTPM: 201.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 339.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 329.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 311.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 305.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 304.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 290.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 289.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 289.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 284.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 282.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 278.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 276.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 272.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 268.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 268.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 267.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 266.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 266.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 265.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 262.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 261.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 261.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 258.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 256.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 255.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 254.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 254.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 254.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 254.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 253.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 253.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 252.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 252.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 251.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 251.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 249.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 249.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 249.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 249.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 248.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 248.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 248.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 248.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 246.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 242.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 242.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 242.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 241.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 240.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 240.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 240.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 239.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 239.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 239.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 239.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 239.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 238.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 238.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 236.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 235.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 235.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 232.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 232.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 230.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 228.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 227.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 226.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 224.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 223.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 223.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 223.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 222.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 222.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 221.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 220.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 220.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 219.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 218.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 218.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 217.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 217.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 216.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 216.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 216.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 215.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 215.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 215.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 215.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 214.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 213.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 213.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 212.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 212.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 212.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 212.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 210.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 210.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 210.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 210.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 210.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 210.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 209.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 209.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 209.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 209.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 208.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 208.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 208.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 207.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 206.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 206.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 206.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 206.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 205.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 205.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 204.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 204.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 203.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 203.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 202.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 202.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 202.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 201.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 200.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 199.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 198.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 198.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 198.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 198.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 196.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 196.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 196.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 194.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 194.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 194.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 194.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 193.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 193.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 193.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 192.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 191.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 191.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 191.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 190.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 190.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 190.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 190.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 189.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 189.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 189.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 189.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 188.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 188.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 188.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 187.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 186.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 186.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 186.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 185.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 185.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 185.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 185.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 185.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 184.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 184.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 183.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 183.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 183.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 181.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 180.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 180.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 179.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 179.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 178.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 178.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 177.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 176.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 176.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 175.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 175.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 175.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 175.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 174.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 174.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 174.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 174.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 173.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 173.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 173.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 173.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 172.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 171.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 170.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 170.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 169.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 168.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 168.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 168.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 167.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 166.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 166.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 165.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 164.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 164.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 164.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 163.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 161.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 160.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 159.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 158.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 157.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 157.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 157.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 156.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 156.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 155.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 154.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 153.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 152.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 151.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 150.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 150.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 149.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 147.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 147.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 146.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 145.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 143.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 140.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 139.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 139.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 137.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 136.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 134.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 134.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 133.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 129.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 127.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 126.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 125.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 125.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 117.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 114.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 107.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 84.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 69.7
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Brain - Putamen (basal ganglia)
Average nTPM: 187.1
Samples: 205

Max nTPM: 325.0
Min nTPM: 94.0
Std nTPM: 39.6
Median nTPM: 183.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 325.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 298.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 288.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 285.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 283.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 282.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 281.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 278.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 273.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 271.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 270.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 259.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 255.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 250.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 249.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 247.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 247.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 241.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 239.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 238.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 238.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 237.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 237.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 236.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 234.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 233.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 232.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 232.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 230.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 228.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 226.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 225.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 224.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 221.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 221.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 220.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 220.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 220.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 219.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 219.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 218.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 218.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 216.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 216.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 216.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 216.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 215.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 214.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 214.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 213.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 211.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 209.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 209.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 208.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 207.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 207.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 206.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 206.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 206.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 205.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 204.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 203.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 202.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 201.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 201.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 201.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 200.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 198.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 196.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 196.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 196.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 196.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 196.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 195.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 195.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 195.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 195.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 194.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 194.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 193.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 193.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 193.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 192.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 192.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 192.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 191.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 190.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 189.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 188.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 188.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 187.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 187.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 187.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 186.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 186.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 185.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 185.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 185.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 184.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 184.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 184.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 183.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 183.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 182.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 181.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 181.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 180.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 179.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 179.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 179.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 179.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 178.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 178.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 176.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 176.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 175.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 175.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 173.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 173.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 173.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 172.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 172.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 172.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 171.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 171.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 170.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 170.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 170.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 169.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 169.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 168.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 168.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 168.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 168.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 167.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 166.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 166.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 165.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 164.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 164.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 163.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 163.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 163.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 162.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 162.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 162.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 161.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 160.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 160.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 160.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 160.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 160.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 159.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 159.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 159.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 158.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 158.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 157.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 156.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 156.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 156.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 155.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 153.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 153.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 152.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 152.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 151.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 151.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 151.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 150.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 149.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 149.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 148.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 147.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 147.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 145.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 145.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 144.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 144.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 144.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 143.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 142.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 141.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 141.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 141.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 139.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 138.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 137.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 136.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 136.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 134.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 133.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 131.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 131.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 131.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 130.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 130.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 130.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 130.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 127.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 127.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 126.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 117.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 115.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 94.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

187.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 149.9
FF:10164-103B2 76 years, female 149.9
Nucleus accumbens
Scaled Tags Per Million: 145.6
FF:10037-101F1 23-56 years, mixed 145.6
Putamen
Scaled Tags Per Million: 187.6
FF:10176-103C5 60 years, female 187.6
Globus pallidus
Scaled Tags Per Million: 113.3
FF:10161-103A8 76 years, female 118.4
FF:10175-103C4 60 years, female 108.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.8
Pig sample Sample description nTPM
Caudate
nTPM: 106.3
Samples: 4

Max nTPM: 129.0
Min nTPM: 81.0
Sample A Female 81.0
Sample B Female 119.3
Sample C Male 129.0
Sample D Male 96.0
Putamen
nTPM: 109.8
Samples: 4

Max nTPM: 137.0
Min nTPM: 87.1
Sample A Female 87.1
Sample B Female 92.6
Sample C Male 122.6
Sample D Male 137.0
Septum
nTPM: 84.9
Samples: 4

Max nTPM: 93.1
Min nTPM: 80.6
Sample A Female 93.1
Sample B Female 80.7
Sample C Male 85.1
Sample D Male 80.6
Ventral pallidum
nTPM: 92.8
Samples: 4

Max nTPM: 102.6
Min nTPM: 83.7
Sample A Female 83.7
Sample B Female 86.0
Sample C Male 102.6
Sample D Male 98.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

303.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 303.4
Samples: 4

Max nTPM: 327.2
Min nTPM: 275.1
Sample A Male 275.1
Sample B Male 317.5
Sample C Female 293.6
Sample D Female 327.2
Septum
nTPM: 266.6
Samples: 4

Max nTPM: 282.1
Min nTPM: 250.1
Sample A Male 282.1
Sample B Male 250.1
Sample C Female 262.0
Sample D Female 272.3
Ventral forebrain
nTPM: 283.5
Samples: 4

Max nTPM: 317.4
Min nTPM: 261.6
Sample A Male 270.5
Sample B Male 261.6
Sample C Female 317.4
Sample D Female 284.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.9
75774677 Antisense, RP_060530_01_D02, Mouse strain C57BL/6J (56 days, male) 16.7
633678 Antisense, RP_040907_02_A10, Mouse strain C57BL/6J (56 days, male) 5.1
Pallidum
Expression energy: 9.6
75774677 Antisense, RP_060530_01_D02, Mouse strain C57BL/6J (56 days, male) 14.9
633678 Antisense, RP_040907_02_A10, Mouse strain C57BL/6J (56 days, male) 4.4

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