HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.0 nTPM
HPA Brain:36.4 nTPM
GTEx:18.0 nTPM
FANTOM5:46.1 Scaled Tags Per Million
Pig:13.6 nTPM
Mouse:7.0 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019142Antibody HPA029401
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 36.4
Sample id Sample description nTPM
Hippocampus
nTPM: 32.0
2529 Female, age 94, left hemisphere 50.0
2148 Female, age 91, left hemisphere 32.6
2621 Female, age 67, right hemisphere 30.1
1898 Male, age 80, left hemisphere 27.3
1911 Female, age 85, right hemisphere 27.1
1855 Male, age 76, left hemisphere 24.8
Dentate gyrus
nTPM: 32.5
2246 Female, age 85, both hemispheres 40.5
2530 Female, age 94, left hemisphere 38.8
2528 Male, age 74, both hemispheres 31.0
2010 Male, age 76, both hemispheres 30.1
1927 Female, age 91, both hemispheres 27.4
2531 Female, age 67, both hemispheres 27.3
Entorhinal gyrus
nTPM: 29.7
2117 Female, age 91, right hemisphere 38.0
2686 Male, age 75, right hemisphere 35.7
1787 Male, age 76, left hemisphere 29.1
2764 Male, age 80, right hemisphere 28.6
1938 Female, age 85, left hemisphere 24.4
2613 Female, age 94, left hemisphere 22.2
Hippocampus, CA1
nTPM: 32.6
2082 Female, age 91, right hemisphere 58.9
2527 Male, age 74, both hemispheres 36.6
2045 Male, age 76, both hemispheres 27.1
1873 Female, age 85, both hemispheres 25.1
2749 Male, age 80, left hemisphere 15.1
Hippocampus, CA2
nTPM: 36.4
2113 Female, age 91, right hemisphere 47.5
2437 Female, age 94, left hemisphere 44.4
1940 Female, age 85, left hemisphere 40.6
2249 Male, age 74, both hemispheres 37.6
1892 Male, age 76, both hemispheres 28.1
1963 Male, age 80, left hemisphere 20.2
Hippocampus, CA3
nTPM: 29.6
2436 Male, age 74, both hemispheres 44.7
2861 Female, age 67, both hemispheres 34.3
1867 Male, age 76, both hemispheres 30.2
1891 Female, age 85, both hemispheres 25.3
2620 Female, age 94, left hemisphere 24.6
2137 Male, age 80, left hemisphere 18.3
Parahippocampal cortex
nTPM: 34.8
2622 Female, age 67, right hemisphere 53.5
2250 Female, age 67, right hemisphere 42.7
2532 Female, age 72, left hemisphere 38.2
2018 Male, age 76, both hemispheres 34.7
2245 Female, age 91, both hemispheres 33.6
1990 Female, age 91, right hemisphere 33.3
2692 Male, age 74, both hemispheres 31.0
2693 Female, age 94, both hemispheres 28.7
1933 Female, age 85, both hemispheres 28.5
1850 Male, age 80, both hemispheres 24.3
Perirhinal gyrus
nTPM: 28.4
2521 Female, age 94, right hemisphere 33.7
1794 Male, age 80, right hemisphere 32.5
1841 Female, age 85, right hemisphere 28.7
1847 Female, age 91, left hemisphere 23.6
2848 Male, age 76, right hemisphere 23.6
Subiculum
nTPM: 31.1
2438 Female, age 94, left hemisphere 40.7
2619 Male, age 74, both hemispheres 34.6
2729 Female, age 91, right hemisphere 32.5
1977 Female, age 85, both hemispheres 26.7
1901 Male, age 80, both hemispheres 26.6
2042 Male, age 76, both hemispheres 25.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.0
Samples: 197

Max nTPM: 40.9
Min nTPM: 4.6
Std nTPM: 6.5
Median nTPM: 16.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 40.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 38.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 36.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 32.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 32.3
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 31.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 30.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 30.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 30.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 30.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 30.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 46.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.1
FF:10153-102I9 76 years, female 65.3
FF:10169-103B7 60 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.6
Pig sample Sample description nTPM
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 21.8
Min nTPM: 2.4
Sample A Female 10.3
Sample B Female 2.4
Sample C Male 13.3
Sample D Male 21.8
Dorsal hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 5.4
Min nTPM: 2.5
Sample A Female 2.7
Sample B Female 2.5
Sample C Male 5.4
Sample D Male 3.3
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 21.4
Min nTPM: 9.3
Sample A Female 21.4
Sample B Female 9.3
Sample C Male 10.5
Sample D Male 13.0
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 14.1
Min nTPM: 3.7
Sample A Female 5.4
Sample B Female 3.7
Sample C Male 14.1
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 7.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 7.6
Sample C Female 7.1
Sample D Female 7.1
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 4.6
Min nTPM: 2.0
Sample A Male 3.5
Sample B Male 3.0
Sample C Female 2.0
Sample D Female 4.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
291 Antisense, RP_Baylor_102698, Mouse strain C57BL/6J (56 days, male) 6.1
290 Antisense, RP_Baylor_102698, Mouse strain C57BL/6J (56 days, male) 3.8
77869097 Antisense, RP_070129_02_G03, Mouse strain C57BL/6J (56 days, male) 1.5

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