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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:509.0 nTPM
HPA Brain:300.2 nTPM
GTEx:509.0 nTPM
FANTOM5:1069.5 Scaled Tags Per Million
Pig:97.9 nTPM
Mouse:707.9 nTPM
Allen mouse:4.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001401Antibody CAB008670
Glial cells MediumHigh
Neuronal cells LowMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

300.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 287.4
2481 Female, age 94, left hemisphere 441.6
2288 Male, age 75, left hemisphere 314.7
2846 Female, age 79, unknown 281.7
2290 Female, age 72, unknown 264.5
1857 Female, age 85, left hemisphere 259.6
1854 Male, age 80, left hemisphere 254.5
1781 Male, age 74, unknown 251.0
2289 Male, age 61, right hemisphere 231.9
Globus pallidus, externus
nTPM: 258.5
2772 Female, age 79, unknown 345.5
1996 Male, age 80, right hemisphere 296.4
2395 Male, age 75, both hemispheres 290.1
2646 Male, age 61, right hemisphere 233.1
2567 Female, age 72, unknown 127.3
Globus pallidus, internus
nTPM: 279.7
2287 Male, age 75, right hemisphere 373.3
2483 Female, age 94, right hemisphere 355.7
2778 Female, age 91, both hemispheres 296.1
1818 Male, age 74, unknown 295.0
2037 Male, age 80, right hemisphere 281.5
2566 Female, age 72, unknown 187.6
2111 Female, age 85, right hemisphere 168.4
Nucleus accumbens
nTPM: 300.2
2391 Female, age 94, left hemisphere 456.8
2286 Male, age 75, left hemisphere 386.6
1856 Female, age 91, right hemisphere 301.1
2698 Female, age 72, unknown 291.7
2824 Male, age 61, right hemisphere 272.9
1806 Female, age 85, left hemisphere 252.6
1783 Male, age 74, unknown 250.5
2732 Male, age 80, right hemisphere 189.1
Nucleus basalis of Meynert
nTPM: 248.7
2821 Male, age 75, both hemispheres 279.8
2484 Female, age 94, left hemisphere 258.7
2393 Male, age 80, right hemisphere 230.7
2569 Male, age 61, both hemispheres 225.5
Nucleus of the diagonal band
nTPM: 294.3
1812 Female, age 91, both hemispheres 381.8
2775 Male, age 80, right hemisphere 332.0
2195 Female, age 85, both hemispheres 302.3
2029 Male, age 61, right hemisphere 253.0
1979 Male, age 74, unknown 202.7
Putamen
nTPM: 256.2
2482 Female, age 94, left hemisphere 395.0
1937 Female, age 91, right hemisphere 281.3
1829 Male, age 74, unknown 259.7
2466 Female, age 79, unknown 257.5
1838 Male, age 80, right hemisphere 245.8
2647 Male, age 75, left hemisphere 201.1
2489 Female, age 72, unknown 152.9
Septal nuclei
nTPM: 276.4
2031 Female, age 72, unknown 361.9
1960 Male, age 74, unknown 337.4
2009 Female, age 91, both hemispheres 297.4
2629 Female, age 94, right hemisphere 296.8
2059 Female, age 85, both hemispheres 232.7
2394 Male, age 61, left hemisphere 216.6
2199 Male, age 80, right hemisphere 192.0
Stria terminalis, bed nucleus
nTPM: 258.8
1974 Female, age 91, both hemispheres 335.8
2486 Female, age 94, both hemispheres 222.8
2201 Male, age 74, unknown 217.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

509.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 489.2
Samples: 246

Max nTPM: 1090.0
Min nTPM: 296.4
Std nTPM: 111.8
Median nTPM: 473.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1090.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 942.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 874.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 837.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 829.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 825.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 819.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 738.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 697.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 689.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 675.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 673.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 670.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 662.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 657.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 655.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 646.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 646.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 644.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 641.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 638.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 637.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 636.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 636.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 632.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 629.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 627.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 623.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 623.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 619.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 618.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 618.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 612.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 610.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 604.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 599.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 595.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 593.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 592.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 582.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 580.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 576.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 575.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 575.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 567.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 567.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 567.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 566.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 562.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 558.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 558.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 550.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 547.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 547.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 545.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 544.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 542.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 542.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 542.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 539.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 538.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 537.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 536.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 536.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 534.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 534.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 531.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 529.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 529.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 525.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 524.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 522.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 521.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 520.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 520.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 519.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 519.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 515.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 511.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 511.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 507.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 506.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 506.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 505.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 504.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 504.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 502.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 502.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 501.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 495.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 495.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 493.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 493.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 493.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 492.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 491.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 491.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 490.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 489.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 489.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 487.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 487.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 486.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 485.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 485.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 484.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 483.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 482.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 482.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 482.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 481.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 480.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 479.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 479.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 479.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 477.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 477.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 476.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 475.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 474.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 474.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 474.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 473.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 472.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 472.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 471.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 471.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 470.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 469.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 469.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 468.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 468.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 463.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 462.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 461.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 460.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 459.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 458.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 457.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 457.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 455.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 453.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 452.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 452.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 451.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 450.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 450.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 449.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 449.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 448.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 447.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 446.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 445.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 445.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 445.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 444.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 443.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 443.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 443.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 443.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 442.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 441.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 440.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 439.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 438.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 436.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 436.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 436.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 434.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 433.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 433.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 433.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 432.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 431.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 431.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 428.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 427.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 427.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 426.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 426.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 424.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 421.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 421.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 420.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 418.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 418.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 417.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 417.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 415.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 413.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 412.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 410.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 409.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 407.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 407.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 406.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 406.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 405.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 405.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 404.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 404.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 401.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 401.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 397.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 395.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 395.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 390.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 390.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 387.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 385.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 382.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 382.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 381.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 380.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 379.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 375.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 371.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 369.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 369.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 369.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 367.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 367.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 366.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 364.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 361.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 359.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 358.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 357.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 352.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 351.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 350.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 348.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 348.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 344.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 338.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 337.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 337.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 336.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 334.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 333.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 329.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 319.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 312.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 310.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 305.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 296.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 509.0
Samples: 246

Max nTPM: 986.6
Min nTPM: 238.5
Std nTPM: 105.6
Median nTPM: 491.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 986.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 977.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 924.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 915.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 789.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 784.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 766.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 749.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 733.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 724.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 708.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 707.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 695.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 672.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 672.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 660.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 645.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 641.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 635.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 630.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 630.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 626.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 624.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 621.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 620.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 619.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 617.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 616.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 609.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 607.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 607.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 602.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 601.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 597.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 596.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 593.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 593.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 591.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 590.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 588.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 588.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 587.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 587.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 585.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 584.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 584.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 582.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 581.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 581.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 580.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 576.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 573.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 573.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 571.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 570.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 568.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 567.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 567.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 566.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 565.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 565.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 564.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 563.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 562.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 561.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 561.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 560.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 558.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 558.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 554.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 551.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 549.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 548.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 545.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 545.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 544.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 543.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 543.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 543.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 541.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 540.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 538.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 528.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 527.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 526.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 525.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 525.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 524.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 524.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 524.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 523.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 523.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 522.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 519.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 518.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 518.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 517.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 516.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 515.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 514.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 514.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 512.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 512.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 511.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 510.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 510.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 509.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 507.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 506.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 505.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 505.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 505.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 504.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 501.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 500.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 500.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 499.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 499.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 496.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 494.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 494.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 491.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 491.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 490.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 490.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 489.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 488.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 488.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 488.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 488.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 487.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 487.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 486.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 486.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 485.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 484.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 483.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 482.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 482.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 480.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 480.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 480.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 478.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 478.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 475.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 475.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 474.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 474.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 473.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 472.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 472.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 472.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 472.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 472.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 472.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 471.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 471.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 469.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 467.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 467.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 466.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 465.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 461.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 461.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 461.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 460.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 460.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 460.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 458.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 458.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 457.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 457.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 456.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 456.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 455.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 454.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 454.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 453.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 453.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 452.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 452.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 452.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 452.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 451.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 448.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 444.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 443.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 441.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 441.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 441.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 440.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 438.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 437.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 435.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 434.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 433.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 433.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 430.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 429.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 429.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 426.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 424.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 423.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 423.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 422.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 422.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 421.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 420.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 420.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 420.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 419.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 418.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 418.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 417.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 413.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 412.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 411.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 410.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 405.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 405.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 404.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 400.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 398.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 398.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 397.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 393.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 391.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 388.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 385.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 385.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 384.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 373.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 370.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 362.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 355.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 353.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 349.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 348.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 334.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 325.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 324.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 324.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 317.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 306.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 278.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 238.5
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Brain - Putamen (basal ganglia)
Average nTPM: 492.8
Samples: 205

Max nTPM: 888.5
Min nTPM: 305.4
Std nTPM: 97.6
Median nTPM: 483.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 888.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 797.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 755.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 725.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 692.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 688.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 688.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 687.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 684.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 682.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 669.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 668.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 668.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 662.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 659.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 658.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 652.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 650.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 647.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 646.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 644.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 643.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 638.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 637.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 621.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 609.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 609.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 600.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 599.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 598.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 596.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 596.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 594.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 594.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 584.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 582.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 580.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 579.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 579.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 573.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 572.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 570.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 567.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 567.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 564.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 554.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 554.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 548.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 546.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 543.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 540.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 538.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 536.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 530.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 530.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 529.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 528.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 526.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 525.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 523.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 522.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 521.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 520.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 517.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 516.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 514.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 513.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 510.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 510.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 509.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 509.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 506.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 506.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 505.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 504.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 504.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 500.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 500.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 499.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 498.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 497.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 496.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 495.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 494.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 494.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 491.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 490.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 489.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 488.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 487.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 487.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 487.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 487.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 486.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 486.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 486.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 486.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 486.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 484.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 484.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 484.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 483.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 483.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 482.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 482.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 480.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 479.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 475.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 473.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 473.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 472.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 471.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 470.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 470.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 470.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 470.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 469.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 467.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 467.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 466.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 465.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 464.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 464.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 462.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 461.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 461.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 459.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 457.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 451.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 450.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 448.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 446.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 446.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 445.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 445.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 444.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 443.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 442.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 442.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 441.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 441.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 439.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 438.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 437.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 437.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 437.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 435.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 434.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 434.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 433.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 433.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 432.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 430.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 429.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 428.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 427.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 426.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 426.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 425.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 425.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 423.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 422.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 421.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 420.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 420.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 419.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 419.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 418.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 414.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 413.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 411.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 410.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 406.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 406.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 401.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 400.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 400.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 398.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 393.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 392.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 388.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 384.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 382.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 378.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 375.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 375.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 372.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 366.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 360.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 359.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 358.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 358.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 357.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 353.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 352.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 346.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 346.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 340.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 332.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 331.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 323.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 322.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 319.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 308.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 305.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1069.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 651.6
FF:10164-103B2 76 years, female 651.6
Nucleus accumbens
Scaled Tags Per Million: 348.7
FF:10037-101F1 23-56 years, mixed 348.7
Putamen
Scaled Tags Per Million: 828.9
FF:10176-103C5 60 years, female 828.9
Globus pallidus
Scaled Tags Per Million: 1069.5
FF:10175-103C4 60 years, female 1557.7
FF:10161-103A8 76 years, female 581.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.9
Pig sample Sample description nTPM
Caudate
nTPM: 72.9
Samples: 4

Max nTPM: 86.2
Min nTPM: 68.0
Sample A Female 69.4
Sample B Female 68.1
Sample C Male 86.2
Sample D Male 68.0
Putamen
nTPM: 97.9
Samples: 4

Max nTPM: 135.3
Min nTPM: 73.3
Sample A Female 89.6
Sample B Female 73.3
Sample C Male 135.3
Sample D Male 93.4
Septum
nTPM: 86.3
Samples: 4

Max nTPM: 114.1
Min nTPM: 70.3
Sample A Female 78.8
Sample B Female 70.3
Sample C Male 114.1
Sample D Male 82.1
Ventral pallidum
nTPM: 80.6
Samples: 4

Max nTPM: 105.0
Min nTPM: 64.8
Sample A Female 64.8
Sample B Female 82.7
Sample C Male 105.0
Sample D Male 69.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

707.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 620.7
Samples: 4

Max nTPM: 667.6
Min nTPM: 542.8
Sample A Male 654.7
Sample B Male 667.6
Sample C Female 542.8
Sample D Female 617.6
Septum
nTPM: 707.9
Samples: 4

Max nTPM: 772.4
Min nTPM: 631.6
Sample A Male 662.6
Sample B Male 765.1
Sample C Female 772.4
Sample D Female 631.6
Ventral forebrain
nTPM: 643.6
Samples: 4

Max nTPM: 798.7
Min nTPM: 557.4
Sample A Male 591.9
Sample B Male 626.5
Sample C Female 798.7
Sample D Female 557.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.1
79587726 Antisense, RP_071204_02_D06, Mouse strain C57BL/6J (56 days, male) 10.0
79749602 Antisense, RP_071204_02_D06, Mouse strain C57BL/6J (56 days, male) 6.2
994 Antisense, RP_Baylor_103044, Mouse strain C57BL/6J (56 days, male) 2.2
993 Sense, RPS_Baylor_37046, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 4.8
79587726 Antisense, RP_071204_02_D06, Mouse strain C57BL/6J (56 days, male) 11.0
79749602 Antisense, RP_071204_02_D06, Mouse strain C57BL/6J (56 days, male) 6.3
994 Antisense, RP_Baylor_103044, Mouse strain C57BL/6J (56 days, male) 3.4
993 Sense, RPS_Baylor_37046, Mouse strain C57BL/6J (56 days, male) 0.0

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