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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:170.8 nTPM
GTEx:170.8 nTPM
FANTOM5:479.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030848
Squamous epithelial cells Not detected



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.8
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 170.8
Samples: 156

Max nTPM: 523.8
Min nTPM: 53.1
Std nTPM: 87.2
Median nTPM: 157.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 523.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 428.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 372.0
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 365.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 345.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 344.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 338.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 327.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 325.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 325.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 325.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 323.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 321.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 315.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 313.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 312.5
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 302.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 296.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 296.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 292.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 288.6
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 284.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 284.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 279.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 273.8
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 272.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 271.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 270.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 265.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 256.5
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 254.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 252.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 248.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 224.1
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 223.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 217.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 215.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 212.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 209.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 202.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 200.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 199.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 198.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 197.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 197.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 194.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 193.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 191.7
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 191.1
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 190.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 189.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 187.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 183.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 183.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 180.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 179.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 179.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 178.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 178.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 178.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 175.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 175.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 175.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 172.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 171.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 171.2
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 170.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 170.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 170.6
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 170.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 169.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 168.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 165.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 164.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 164.3
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 163.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 161.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 158.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 155.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 155.7
GTEX-16NPV-2526-SM-6M483 50-59 years, female 148.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 145.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 143.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 143.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 143.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 143.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 142.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 140.3
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 139.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 136.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 136.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 136.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 135.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 132.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 130.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 130.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 129.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 128.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 127.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 125.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 125.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 120.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 119.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 117.1
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 114.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 112.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 111.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 109.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 103.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 103.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 102.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 99.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 98.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 98.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 98.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 97.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 96.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 95.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 95.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 94.6
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 94.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 93.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 91.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 91.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 90.9
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 90.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 90.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 90.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 89.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 89.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 88.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 86.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 85.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 84.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 84.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 82.2
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 81.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 81.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 80.9
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 80.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 78.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 78.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 77.1
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 76.4
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 75.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 74.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 72.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 71.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 69.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 68.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 68.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 66.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 66.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 66.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 59.8
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 53.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

479.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 479.9
FF:10204-103F6 68 years, female 479.9

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