HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:266.7 nTPM
HPA Brain:331.6 nTPM
GTEx:266.7 nTPM
FANTOM5:270.5 Scaled Tags Per Million
Pig:312.5 nTPM
Mouse:530.5 nTPM
Allen mouse:23.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB007742
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 331.6
Sample id Sample description nTPM
Hippocampus
nTPM: 288.8
1898 Male, age 80, left hemisphere 342.6
1855 Male, age 76, left hemisphere 312.8
2621 Female, age 67, right hemisphere 300.7
1911 Female, age 85, right hemisphere 278.3
2148 Female, age 91, left hemisphere 262.6
2529 Female, age 94, left hemisphere 235.8
Dentate gyrus
nTPM: 295.7
2530 Female, age 94, left hemisphere 326.4
2010 Male, age 76, both hemispheres 322.5
1927 Female, age 91, both hemispheres 317.5
2246 Female, age 85, both hemispheres 293.9
2531 Female, age 67, both hemispheres 280.0
2528 Male, age 74, both hemispheres 234.1
Entorhinal gyrus
nTPM: 276.8
1938 Female, age 85, left hemisphere 308.8
2764 Male, age 80, right hemisphere 308.5
2613 Female, age 94, left hemisphere 300.2
1787 Male, age 76, left hemisphere 280.7
2117 Female, age 91, right hemisphere 237.8
2686 Male, age 75, right hemisphere 224.8
Hippocampus, CA1
nTPM: 331.6
2749 Male, age 80, left hemisphere 488.7
2045 Male, age 76, both hemispheres 329.6
1873 Female, age 85, both hemispheres 290.1
2527 Male, age 74, both hemispheres 279.8
2082 Female, age 91, right hemisphere 269.8
Hippocampus, CA2
nTPM: 283.9
1892 Male, age 76, both hemispheres 317.8
1963 Male, age 80, left hemisphere 317.1
2437 Female, age 94, left hemisphere 283.4
1940 Female, age 85, left hemisphere 279.5
2249 Male, age 74, both hemispheres 255.6
2113 Female, age 91, right hemisphere 249.8
Hippocampus, CA3
nTPM: 305.9
2137 Male, age 80, left hemisphere 405.0
1867 Male, age 76, both hemispheres 305.7
2620 Female, age 94, left hemisphere 301.4
2861 Female, age 67, both hemispheres 298.9
2436 Male, age 74, both hemispheres 285.0
1891 Female, age 85, both hemispheres 239.6
Parahippocampal cortex
nTPM: 273.8
2245 Female, age 91, both hemispheres 338.0
1933 Female, age 85, both hemispheres 302.3
1850 Male, age 80, both hemispheres 287.2
2250 Female, age 67, right hemisphere 284.6
2532 Female, age 72, left hemisphere 282.0
2018 Male, age 76, both hemispheres 275.7
1990 Female, age 91, right hemisphere 264.9
2693 Female, age 94, both hemispheres 244.1
2622 Female, age 67, right hemisphere 237.3
2692 Male, age 74, both hemispheres 222.1
Perirhinal gyrus
nTPM: 314.7
1847 Female, age 91, left hemisphere 381.3
1794 Male, age 80, right hemisphere 318.9
2521 Female, age 94, right hemisphere 310.3
1841 Female, age 85, right hemisphere 305.8
2848 Male, age 76, right hemisphere 257.0
Subiculum
nTPM: 252.7
1901 Male, age 80, both hemispheres 302.0
1977 Female, age 85, both hemispheres 291.0
2042 Male, age 76, both hemispheres 263.6
2438 Female, age 94, left hemisphere 223.2
2619 Male, age 74, both hemispheres 223.1
2729 Female, age 91, right hemisphere 213.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 266.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 266.7
Samples: 197

Max nTPM: 586.8
Min nTPM: 123.9
Std nTPM: 85.4
Median nTPM: 256.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 586.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 517.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 491.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 460.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 458.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 457.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 448.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 441.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 430.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 425.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 418.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 270.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 270.5
FF:10169-103B7 60 years, female 343.7
FF:10153-102I9 76 years, female 197.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 312.5
Pig sample Sample description nTPM
Subiculum
nTPM: 252.4
Samples: 4

Max nTPM: 308.5
Min nTPM: 224.0
Sample A Female 308.5
Sample B Female 240.8
Sample C Male 236.2
Sample D Male 224.0
Dorsal hippocampus
nTPM: 312.5
Samples: 4

Max nTPM: 403.8
Min nTPM: 232.4
Sample A Female 403.8
Sample B Female 315.9
Sample C Male 297.7
Sample D Male 232.4
Entorhinal cortex
nTPM: 258.6
Samples: 4

Max nTPM: 281.0
Min nTPM: 212.3
Sample A Female 272.2
Sample B Female 281.0
Sample C Male 269.0
Sample D Male 212.3
Ventral hippocampus
nTPM: 278.2
Samples: 4

Max nTPM: 312.7
Min nTPM: 204.3
Sample A Female 288.5
Sample B Female 204.3
Sample C Male 307.4
Sample D Male 312.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 530.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 430.0
Samples: 4

Max nTPM: 454.9
Min nTPM: 400.9
Sample A Male 400.9
Sample B Male 420.4
Sample C Female 443.9
Sample D Female 454.9
Hippocampal formation
nTPM: 530.5
Samples: 4

Max nTPM: 570.0
Min nTPM: 487.1
Sample A Male 536.7
Sample B Male 528.3
Sample C Female 570.0
Sample D Female 487.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 23.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.6
199390 Antisense, RP_040507_02_D11, Mouse strain C57BL/6J (56 days, male) 27.8
77620391 Antisense, RP_070205_01_E12, Mouse strain C57BL/6J (56 days, male) 19.3
77414125 Antisense, RP_070205_01_E12, Mouse strain C57BL/6J (56 days, male) 19.1

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