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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:161.3 nTPM
HPA Brain:231.6 nTPM
GTEx:161.3 nTPM
FANTOM5:208.9 Scaled Tags Per Million
Pig:63.4 nTPM
Mouse:51.8 nTPM
Allen mouse:2.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020593Antibody HPA048847
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

231.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 175.1
2481 Female, age 94, left hemisphere 240.4
2289 Male, age 61, right hemisphere 197.8
1857 Female, age 85, left hemisphere 180.0
2290 Female, age 72, unknown 173.0
2288 Male, age 75, left hemisphere 164.4
1854 Male, age 80, left hemisphere 160.0
2846 Female, age 79, unknown 150.4
1781 Male, age 74, unknown 134.7
Globus pallidus, externus
nTPM: 231.6
2646 Male, age 61, right hemisphere 338.9
1996 Male, age 80, right hemisphere 268.8
2772 Female, age 79, unknown 222.6
2567 Female, age 72, unknown 184.1
2395 Male, age 75, both hemispheres 143.5
Globus pallidus, internus
nTPM: 217.8
2483 Female, age 94, right hemisphere 291.1
1818 Male, age 74, unknown 261.6
2037 Male, age 80, right hemisphere 250.4
2287 Male, age 75, right hemisphere 189.4
2566 Female, age 72, unknown 187.2
2778 Female, age 91, both hemispheres 184.8
2111 Female, age 85, right hemisphere 160.1
Nucleus accumbens
nTPM: 155.9
2286 Male, age 75, left hemisphere 188.2
2698 Female, age 72, unknown 173.0
1806 Female, age 85, left hemisphere 165.4
1856 Female, age 91, right hemisphere 153.3
2391 Female, age 94, left hemisphere 152.5
2732 Male, age 80, right hemisphere 150.7
1783 Male, age 74, unknown 140.7
2824 Male, age 61, right hemisphere 123.8
Nucleus basalis of Meynert
nTPM: 187.1
2569 Male, age 61, both hemispheres 362.2
2484 Female, age 94, left hemisphere 149.0
2821 Male, age 75, both hemispheres 120.4
2393 Male, age 80, right hemisphere 116.6
Nucleus of the diagonal band
nTPM: 107.8
1812 Female, age 91, both hemispheres 134.4
2195 Female, age 85, both hemispheres 113.0
1979 Male, age 74, unknown 108.5
2775 Male, age 80, right hemisphere 98.7
2029 Male, age 61, right hemisphere 84.7
Putamen
nTPM: 149.2
2482 Female, age 94, left hemisphere 200.1
1937 Female, age 91, right hemisphere 164.3
2647 Male, age 75, left hemisphere 149.6
2489 Female, age 72, unknown 140.7
1829 Male, age 74, unknown 140.0
2466 Female, age 79, unknown 128.4
1838 Male, age 80, right hemisphere 121.1
Septal nuclei
nTPM: 124.0
2059 Female, age 85, both hemispheres 142.6
2199 Male, age 80, right hemisphere 142.3
2394 Male, age 61, left hemisphere 133.7
2009 Female, age 91, both hemispheres 123.9
1960 Male, age 74, unknown 114.1
2629 Female, age 94, right hemisphere 111.7
2031 Female, age 72, unknown 99.8
Stria terminalis, bed nucleus
nTPM: 119.7
2201 Male, age 74, unknown 143.7
1974 Female, age 91, both hemispheres 120.5
2486 Female, age 94, both hemispheres 94.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 149.7
Samples: 246

Max nTPM: 657.3
Min nTPM: 25.5
Std nTPM: 83.8
Median nTPM: 133.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 657.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 536.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 481.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 449.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 411.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 378.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 376.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 354.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 347.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 301.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 299.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 291.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 283.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 280.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 279.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 277.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 271.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 265.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 265.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 262.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 260.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 253.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 250.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 248.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 242.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 234.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 232.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 232.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 230.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 229.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 229.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 229.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 226.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 224.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 223.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 219.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 214.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 212.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 210.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 210.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 209.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 208.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 208.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 208.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 206.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 203.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 203.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 202.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 199.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 195.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 194.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 194.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 193.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 192.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 191.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 190.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 189.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 188.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 187.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 187.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 187.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 185.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 184.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 184.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 181.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 179.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 177.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 177.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 174.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 173.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 172.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 171.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 171.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 170.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 170.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 169.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 165.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 164.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 163.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 162.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 162.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 161.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 161.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 161.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 160.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 159.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 157.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 156.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 156.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 156.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 154.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 153.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 152.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 151.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 149.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 149.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 149.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 149.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 148.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 145.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 145.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 144.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 143.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 143.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 143.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 143.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 141.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 141.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 140.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 140.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 140.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 140.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 139.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 138.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 137.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 137.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 137.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 136.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 135.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 135.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 134.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 134.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 133.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 133.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 133.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 133.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 132.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 131.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 131.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 130.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 130.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 129.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 128.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 128.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 127.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 124.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 123.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 122.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 122.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 121.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 120.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 120.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 118.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 118.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 118.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 117.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 116.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 116.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 115.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 114.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 113.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 113.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 113.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 112.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 111.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 110.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 109.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 109.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 109.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 108.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 108.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 108.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 107.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 106.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 106.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 106.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 106.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 105.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 104.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 103.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 101.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 101.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 101.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 99.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 98.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 98.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 97.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 97.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 97.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 96.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 96.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 96.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 95.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 95.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 94.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 93.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 92.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 91.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 90.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 90.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 89.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 89.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 88.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 88.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 86.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 86.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 85.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 85.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 85.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 84.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 84.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 84.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 83.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 82.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 82.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 79.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 78.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 78.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 76.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 76.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 75.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 73.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 73.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 72.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 72.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 72.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 72.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 71.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 67.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 67.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 67.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 65.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 64.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 62.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 60.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 59.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 59.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 58.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 57.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 52.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 50.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 47.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 46.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 44.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 44.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 41.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 33.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 25.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 154.5
Samples: 246

Max nTPM: 977.2
Min nTPM: 42.1
Std nTPM: 107.8
Median nTPM: 121.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 977.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 615.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 606.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 566.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 471.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 466.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 465.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 423.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 419.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 372.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 369.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 335.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 322.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 319.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 299.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 293.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 291.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 289.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 288.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 278.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 277.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 270.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 268.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 265.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 263.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 261.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 261.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 257.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 257.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 256.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 256.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 254.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 250.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 250.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 250.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 243.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 241.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 239.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 236.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 236.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 228.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 223.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 223.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 221.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 219.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 219.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 218.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 218.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 215.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 205.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 203.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 198.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 198.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 197.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 195.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 192.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 192.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 187.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 187.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 186.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 185.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 184.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 182.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 181.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 179.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 179.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 177.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 175.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 174.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 171.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 169.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 168.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 163.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 163.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 163.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 159.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 158.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 158.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 157.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 154.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 153.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 153.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 153.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 152.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 148.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 148.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 148.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 147.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 147.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 146.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 146.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 145.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 145.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 145.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 144.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 144.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 143.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 142.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 141.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 140.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 140.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 137.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 137.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 137.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 135.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 135.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 134.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 133.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 133.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 132.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 132.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 130.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 130.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 130.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 129.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 129.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 128.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 127.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 126.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 125.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 125.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 123.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 122.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 121.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 121.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 121.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 120.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 119.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 119.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 119.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 119.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 119.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 118.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 118.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 118.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 118.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 118.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 117.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 117.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 117.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 117.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 116.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 116.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 114.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 113.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 112.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 111.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 109.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 108.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 108.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 108.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 106.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 105.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 105.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 105.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 105.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 104.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 104.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 104.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 104.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 102.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 102.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 102.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 102.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 102.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 101.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 101.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 99.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 98.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 97.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 97.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 97.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 96.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 96.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 96.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 95.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 94.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 93.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 93.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 92.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 91.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 91.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 91.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 90.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 89.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 88.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 88.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 88.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 88.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 88.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 88.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 86.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 85.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 84.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 83.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 81.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 81.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 81.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 80.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 80.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 79.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 79.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 78.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 77.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 77.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 76.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 76.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 75.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 75.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 74.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 74.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 74.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 74.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 74.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 73.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 73.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 72.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 71.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 71.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 70.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 70.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 70.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 69.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 69.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 67.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 67.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 64.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 64.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 63.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 62.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 62.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 61.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 60.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 58.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 56.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 55.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 55.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 54.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 53.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 52.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 51.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 49.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 49.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 47.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 45.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 42.1
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Brain - Putamen (basal ganglia)
Average nTPM: 161.3
Samples: 205

Max nTPM: 465.9
Min nTPM: 34.2
Std nTPM: 81.6
Median nTPM: 146.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 465.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 426.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 393.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 388.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 386.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 383.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 360.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 353.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 339.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 328.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 328.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 321.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 311.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 311.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 306.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 297.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 296.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 295.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 293.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 286.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 264.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 256.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 256.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 252.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 250.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 248.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 247.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 242.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 240.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 239.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 239.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 238.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 236.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 235.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 232.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 231.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 231.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 227.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 225.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 224.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 223.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 222.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 220.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 217.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 212.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 210.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 210.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 209.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 208.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 205.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 204.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 204.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 202.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 201.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 199.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 198.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 196.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 195.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 194.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 190.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 187.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 187.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 186.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 183.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 181.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 180.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 180.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 179.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 176.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 176.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 175.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 175.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 174.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 174.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 174.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 173.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 171.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 171.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 170.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 169.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 169.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 169.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 168.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 166.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 165.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 164.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 163.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 161.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 160.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 160.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 159.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 159.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 157.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 157.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 154.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 154.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 152.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 151.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 151.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 147.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 146.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 146.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 146.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 145.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 144.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 143.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 140.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 137.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 135.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 135.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 133.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 133.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 132.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 131.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 131.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 131.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 129.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 127.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 126.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 126.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 125.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 124.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 123.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 123.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 121.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 120.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 120.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 120.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 119.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 119.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 119.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 118.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 118.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 117.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 117.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 115.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 114.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 114.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 113.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 112.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 112.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 112.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 110.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 110.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 110.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 108.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 107.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 106.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 106.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 106.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 105.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 104.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 103.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 103.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 103.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 101.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 101.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 100.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 100.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 99.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 98.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 95.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 94.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 89.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 89.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 88.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 88.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 88.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 87.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 86.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 85.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 85.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 83.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 83.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 82.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 81.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 81.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 81.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 81.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 80.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 79.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 79.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 78.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 77.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 75.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 73.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 70.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 68.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 68.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 66.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 66.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 63.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 63.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 62.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 62.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 60.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 59.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 54.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 53.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 52.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 52.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 47.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 36.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 36.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 34.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

208.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 194.4
FF:10164-103B2 76 years, female 194.4
Nucleus accumbens
Scaled Tags Per Million: 208.9
FF:10037-101F1 23-56 years, mixed 208.9
Putamen
Scaled Tags Per Million: 177.1
FF:10176-103C5 60 years, female 177.1
Globus pallidus
Scaled Tags Per Million: 183.0
FF:10175-103C4 60 years, female 222.0
FF:10161-103A8 76 years, female 144.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.4
Pig sample Sample description nTPM
Caudate
nTPM: 63.4
Samples: 4

Max nTPM: 84.7
Min nTPM: 44.4
Sample A Female 65.8
Sample B Female 84.7
Sample C Male 58.6
Sample D Male 44.4
Putamen
nTPM: 28.3
Samples: 4

Max nTPM: 36.4
Min nTPM: 24.2
Sample A Female 27.9
Sample B Female 24.2
Sample C Male 24.5
Sample D Male 36.4
Septum
nTPM: 58.8
Samples: 4

Max nTPM: 120.4
Min nTPM: 25.6
Sample A Female 25.6
Sample B Female 45.5
Sample C Male 43.7
Sample D Male 120.4
Ventral pallidum
nTPM: 33.3
Samples: 4

Max nTPM: 50.0
Min nTPM: 16.2
Sample A Female 16.2
Sample B Female 41.0
Sample C Male 25.8
Sample D Male 50.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 51.8
Samples: 4

Max nTPM: 64.2
Min nTPM: 45.0
Sample A Male 64.2
Sample B Male 47.3
Sample C Female 45.0
Sample D Female 50.6
Septum
nTPM: 37.1
Samples: 4

Max nTPM: 42.8
Min nTPM: 34.9
Sample A Male 35.2
Sample B Male 34.9
Sample C Female 42.8
Sample D Female 35.3
Ventral forebrain
nTPM: 42.2
Samples: 4

Max nTPM: 51.6
Min nTPM: 35.1
Sample A Male 39.7
Sample B Male 42.3
Sample C Female 51.6
Sample D Female 35.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.5
68498247 Antisense, RP_050113_01_E12, Mouse strain C57BL/6J (56 days, male) 2.5
Pallidum
Expression energy: 0.9
68498247 Antisense, RP_050113_01_E12, Mouse strain C57BL/6J (56 days, male) 0.9

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