PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:810.1 nTPM
FANTOM5:1290.6 Scaled Tags Per Million
Pig:1298.4 nTPM
Mouse:1776.7 nTPM
Allen mouse:13.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 810.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 633.3
2188 Female, age 91, both hemispheres 760.5
2301 Female, age 85, both hemispheres 650.0
2090 Male, age 80, both hemispheres 588.3
1984 Male, age 76, both hemispheres 534.5
Area postrema
nTPM: 510.2
2054 Male, age 76, both hemispheres 610.6
2306 Male, age 80, both hemispheres 491.8
2799 Male, age 61, both hemispheres 428.0
Dorsal cochlear nucleus
nTPM: 609.8
2802 Male, age 74, right hemisphere 749.0
2187 Female, age 91, both hemispheres 725.8
2378 Male, age 80, both hemispheres 554.8
2058 Male, age 76, both hemispheres 529.7
2370 Male, age 61, both hemispheres 489.4
Dorsal medullary reticular nucleus
nTPM: 631.9
2040 Female, age 85, both hemispheres 813.3
2373 Male, age 61, both hemispheres 553.3
2088 Male, age 76, both hemispheres 529.0
Dorsal motor vagal complex
nTPM: 544.9
2133 Female, age 91, both hemispheres 769.6
2000 Male, age 74, unknown 647.4
2185 Male, age 76, both hemispheres 535.7
2844 Male, age 55, unknown 531.5
2813 Female, age 72, unknown 513.2
2807 Female, age 85, both hemispheres 475.0
2643 Male, age 74, both hemispheres 468.0
2797 Male, age 61, both hemispheres 419.0
Dorsal tegmental nucleus
nTPM: 613.2
2326 Male, age 74, both hemispheres 768.5
2083 Male, age 80, both hemispheres 659.2
1936 Male, age 76, left hemisphere 618.2
2358 Male, age 61, both hemispheres 406.8
Dorsolateral tegmental area
nTPM: 590.4
2751 Female, age 85, both hemispheres 763.0
2360 Male, age 74, both hemispheres 621.1
2654 Male, age 80, both hemispheres 620.6
2141 Male, age 76, both hemispheres 478.8
2337 Male, age 61, both hemispheres 468.3
Gigantocellular reticular nuclei, medullary
nTPM: 664.0
2387 Female, age 91, both hemispheres 770.8
1876 Female, age 85, both hemispheres 767.6
2314 Male, age 61, both hemispheres 650.3
2022 Male, age 76, right hemisphere 639.2
2462 Male, age 74, both hemispheres 628.6
2310 Male, age 80, both hemispheres 527.3
Gigantocellular reticular nuclei, pars
nTPM: 588.3
2084 Female, age 85, both hemispheres 678.0
2168 Male, age 76, both hemispheres 661.2
2336 Male, age 61, both hemispheres 585.5
2706 Male, age 80, both hemispheres 532.0
2330 Male, age 80, both hemispheres 484.9
Inferior olive
nTPM: 636.8
2563 Male, age 74, both hemispheres 777.5
2085 Female, age 85, both hemispheres 695.7
2178 Male, age 61, both hemispheres 609.9
2628 Female, age 91, both hemispheres 583.0
2379 Male, age 80, both hemispheres 517.7
Kolliker-Fuse nucleus
nTPM: 664.9
2163 Male, age 80, both hemispheres 713.4
2793 Female, age 91, left hemisphere 697.8
2315 Male, age 76, right hemisphere 583.5
Lateral lemniscal nuclei
nTPM: 673.3
2169 Male, age 76, both hemispheres 748.4
2453 Male, age 74, right hemisphere 696.3
2746 Female, age 85, left hemisphere 670.7
2036 Male, age 80, both hemispheres 634.0
2320 Female, age 91, left hemisphere 617.1
Lateral medullary reticular nucleus
nTPM: 710.1
2305 Male, age 74, both hemispheres 1006.9
2804 Female, age 91, both hemispheres 756.3
2044 Male, age 76, both hemispheres 687.1
2190 Female, age 85, both hemispheres 648.8
2852 Male, age 80, both hemispheres 583.1
2374 Male, age 61, both hemispheres 578.0
Lateral parabrachial nucleus
nTPM: 643.0
2139 Female, age 85, right hemisphere 718.3
2792 Male, age 76, both hemispheres 695.4
2013 Male, age 80, both hemispheres 676.0
2790 Male, age 61, both hemispheres 482.2
Lateral vestibular nucleus
nTPM: 624.8
2184 Male, age 76, both hemispheres 667.6
2311 Male, age 80, both hemispheres 582.1
Locus coeruleus
nTPM: 676.4
2014 Male, age 55, unknown 774.2
2788 Male, age 74, unknown 755.0
2123 Female, age 91, both hemispheres 743.3
2720 Male, age 74, both hemispheres 675.2
2317 Female, age 72, unknown 641.0
2162 Male, age 80, both hemispheres 587.7
1980 Male, age 76, both hemispheres 558.7
Medial olivary nucleus
nTPM: 677.4
2138 Female, age 91, both hemispheres 759.0
1943 Male, age 61, both hemispheres 754.3
1962 Male, age 76, both hemispheres 622.5
2851 Male, age 80, both hemispheres 574.0
Medial parabrachial nucleus
nTPM: 636.3
2170 Female, age 91, both hemispheres 802.5
2854 Male, age 80, both hemispheres 688.0
2463 Female, age 85, right hemisphere 610.6
2786 Male, age 76, both hemispheres 562.3
2156 Male, age 61, both hemispheres 518.1
Medial periolivary nuclei
nTPM: 738.5
2791 Male, age 74, right hemisphere 983.7
2171 Female, age 85, both hemispheres 795.6
2063 Male, age 76, both hemispheres 779.8
2081 Male, age 80, both hemispheres 585.2
2458 Female, age 91, both hemispheres 548.0
Medial vestibular nucleus
nTPM: 738.2
2801 Male, age 74, both hemispheres 904.6
2803 Female, age 91, both hemispheres 882.8
2093 Male, age 80, both hemispheres 720.2
2134 Male, age 76, both hemispheres 704.2
2743 Female, age 85, both hemispheres 631.7
2624 Male, age 61, both hemispheres 585.5
Motor facial nucleus
nTPM: 702.3
2365 Male, age 74, right hemisphere 860.6
2062 Male, age 76, both hemispheres 824.2
2697 Female, age 85, both hemispheres 690.7
2126 Male, age 61, both hemispheres 638.8
2795 Female, age 91, both hemispheres 637.0
2327 Male, age 80, both hemispheres 562.3
Motor hypoglossal nucleus
nTPM: 615.4
2125 Female, age 91, both hemispheres 847.4
2132 Female, age 85, both hemispheres 773.8
2461 Male, age 61, both hemispheres 515.4
2277 Male, age 76, both hemispheres 481.2
2182 Male, age 80, both hemispheres 459.1
Motor trigeminal nucleus
nTPM: 583.2
2560 Male, age 74, both hemispheres 698.1
2079 Male, age 80, both hemispheres 619.6
2321 Female, age 91, both hemispheres 577.1
2309 Male, age 76, both hemispheres 566.9
2335 Male, age 61, both hemispheres 454.2
Nuclei of the trapezoid body
nTPM: 760.6
2159 Male, age 61, both hemispheres 1020.1
1983 Male, age 76, both hemispheres 832.3
2735 Female, age 85, both hemispheres 759.8
2166 Male, age 80, both hemispheres 596.9
2368 Female, age 91, both hemispheres 594.0
Nucleus ambiguus
nTPM: 566.6
2071 Male, age 76, both hemispheres 693.7
2096 Female, age 85, both hemispheres 439.5
Nucleus cuneatus
nTPM: 572.5
2564 Male, age 74, both hemispheres 667.7
2808 Female, age 85, both hemispheres 634.7
2381 Male, age 80, both hemispheres 595.2
2376 Male, age 61, both hemispheres 587.4
2380 Male, age 80, both hemispheres 586.1
2131 Male, age 76, both hemispheres 581.5
2100 Male, age 76, both hemispheres 558.6
2805 Female, age 91, both hemispheres 496.6
2562 Male, age 61, both hemispheres 444.8
Nucleus gracilis
nTPM: 588.6
2627 Male, age 74, both hemispheres 726.6
2382 Male, age 80, both hemispheres 585.1
2299 Female, age 85, both hemispheres 454.0
Nucleus raphe magnus
nTPM: 730.5
2160 Male, age 61, both hemispheres 978.1
2455 Male, age 74, both hemispheres 799.3
2051 Male, age 76, both hemispheres 712.2
2172 Female, age 85, both hemispheres 700.9
2328 Male, age 80, both hemispheres 597.9
2459 Female, age 91, both hemispheres 594.8
Nucleus raphe obscurus
nTPM: 721.6
2845 Female, age 85, midline 894.4
2800 Male, age 61, midline 724.5
2142 Male, age 76, midline 546.0
Nucleus raphe pallidus
nTPM: 697.6
1924 Male, age 61, midline 827.9
2183 Male, age 80, midline 646.0
2145 Male, age 76, midline 618.8
Nucleus tractus solitarii
nTPM: 591.1
2144 Female, age 91, right hemisphere 996.7
2656 Male, age 76, both hemispheres 539.5
2191 Female, age 85, both hemispheres 499.1
2307 Male, age 80, both hemispheres 329.2
Paramedian reticular nucleus
nTPM: 740.2
2050 Female, age 85, both hemispheres 834.8
2313 Male, age 61, both hemispheres 767.7
2052 Male, age 76, both hemispheres 712.7
2057 Male, age 80, both hemispheres 645.7
Parvicellular reticular nuclei
nTPM: 626.3
2119 Male, age 80, both hemispheres 681.0
2095 Male, age 76, both hemispheres 645.6
2558 Male, age 74, both hemispheres 552.4
Parvicellular reticular nuclei, medullary
nTPM: 662.0
2189 Female, age 91, both hemispheres 729.9
2091 Female, age 85, both hemispheres 660.8
2181 Male, age 80, left hemisphere 595.3
Pedunculopontine tegmental nucleus
nTPM: 646.3
2334 Male, age 80, both hemispheres 667.1
1921 Female, age 85, both hemispheres 651.6
2338 Male, age 61, both hemispheres 620.3
Peritrigeminal nucleus
nTPM: 681.6
2179 Male, age 61, both hemispheres 711.9
2136 Male, age 76, both hemispheres 685.8
2067 Female, age 85, both hemispheres 647.2
Pontine nuclei
nTPM: 810.1
2454 Male, age 74, left hemisphere 1025.3
2727 Male, age 61, right hemisphere 983.1
1863 Male, age 55, unknown 941.9
2109 Female, age 72, unknown 863.3
2787 Female, age 85, both hemispheres 737.4
2319 Female, age 91, both hemispheres 723.5
1968 Male, age 76, left hemisphere 700.0
2115 Male, age 80, left hemisphere 506.1
Pontine raphe nucleus
nTPM: 691.5
2122 Female, age 85, midline 761.6
2853 Male, age 76, midline 621.5
Posteroventral cochlear nucleus
nTPM: 651.6
2135 Female, age 91, both hemispheres 737.0
2341 Male, age 80, both hemispheres 725.5
2752 Female, age 85, both hemispheres 704.9
2070 Male, age 76, both hemispheres 591.7
2371 Male, age 61, both hemispheres 499.1
Prepositus hypoglossal nucleus
nTPM: 694.7
2855 Female, age 85, right hemisphere 911.6
2086 Male, age 80, both hemispheres 477.9
Principal sensory trigeminal nucleus
nTPM: 696.2
2158 Male, age 61, both hemispheres 745.2
2008 Male, age 80, left hemisphere 705.6
2367 Female, age 91, left hemisphere 694.8
2324 Male, age 76, both hemispheres 639.3
Reticular pontine nucleus, caudal
nTPM: 699.9
2559 Male, age 74, both hemispheres 851.8
2092 Male, age 76, both hemispheres 717.4
2457 Female, age 91, both hemispheres 706.6
2332 Male, age 80, right hemisphere 523.7
Reticular pontine nucleus, oral
nTPM: 744.2
2361 Male, age 74, both hemispheres 848.2
1939 Male, age 80, both hemispheres 772.7
2366 Female, age 91, both hemispheres 744.4
2012 Female, age 85, both hemispheres 722.5
2167 Male, age 76, both hemispheres 633.2
Reticulotegmental nucleus
nTPM: 635.8
2322 Female, age 91, both hemispheres 701.3
2325 Male, age 76, both hemispheres 639.7
2452 Male, age 74, both hemispheres 635.3
2333 Male, age 80, both hemispheres 567.0
Spinal trigeminal nucleus, caudal
nTPM: 654.8
2390 Female, age 91, both hemispheres 914.1
2447 Male, age 76, both hemispheres 643.4
2312 Male, age 61, both hemispheres 606.1
2642 Male, age 74, both hemispheres 581.9
2308 Male, age 80, both hemispheres 528.4
Spinal trigeminal nucleus, interpolar
nTPM: 782.5
2625 Male, age 61, both hemispheres 969.8
2066 Male, age 76, right hemisphere 771.6
2389 Female, age 91, both hemispheres 753.2
2386 Female, age 85, both hemispheres 733.6
2033 Male, age 80, both hemispheres 684.2
Spinal trigeminal nucleus, oral
nTPM: 626.5
2737 Female, age 85, both hemispheres 659.9
2164 Male, age 80, both hemispheres 647.2
1978 Male, age 76, both hemispheres 572.2
Spinal vestibular nucleus
nTPM: 713.3
2806 Female, age 85, both hemispheres 852.8
2186 Female, age 91, both hemispheres 773.0
2384 Male, age 74, both hemispheres 711.9
2748 Male, age 76, both hemispheres 654.2
2780 Male, age 80, both hemispheres 648.0
2796 Male, age 61, both hemispheres 639.6
Subcoeruleus area
nTPM: 672.4
1958 Male, age 80, both hemispheres 768.9
2369 Female, age 85, left hemisphere 748.4
2323 Female, age 91, left hemisphere 642.4
2451 Male, age 74, both hemispheres 605.1
2089 Male, age 76, left hemisphere 597.1
Superior olive
nTPM: 735.9
2364 Male, age 74, right hemisphere 913.2
1875 Female, age 85, both hemispheres 864.1
2020 Male, age 76, both hemispheres 757.4
2329 Male, age 80, right hemisphere 580.4
2561 Female, age 91, both hemispheres 564.5
Superior vestibular nucleus
nTPM: 708.9
2383 Male, age 74, both hemispheres 898.5
2015 Male, age 80, both hemispheres 706.7
2061 Male, age 76, both hemispheres 521.5
Ventral medullary reticular nucleus
nTPM: 590.5
2372 Male, age 61, both hemispheres 628.9
2060 Male, age 76, both hemispheres 552.2
Ventral periolivary nuclei
nTPM: 685.1
2023 Male, age 76, both hemispheres 815.2
2165 Male, age 80, both hemispheres 688.9
2130 Female, age 85, both hemispheres 668.8
2794 Female, age 91, left hemisphere 567.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 669.8
2741 Female, age 85, both hemispheres 733.5
2180 Male, age 61, both hemispheres 727.9
2302 Female, age 91, both hemispheres 671.6
1986 Male, age 76, both hemispheres 626.9
2118 Male, age 80, both hemispheres 589.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 663.2
2449 Male, age 74, both hemispheres 759.3
1959 Male, age 76, both hemispheres 751.9
2840 Female, age 85, both hemispheres 717.7
2161 Male, age 80, both hemispheres 603.1
2359 Male, age 61, both hemispheres 589.3
2456 Female, age 91, both hemispheres 558.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1290.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1290.6
FF:10182-103D2 60 years, female 1431.9
FF:10165-103B3 76 years, female 1149.3
Medulla oblongata
Scaled Tags Per Million: 729.8
FF:10155-103A2 76 years, female 793.0
FF:10174-103C3 60 years, female 702.6
FF:10038-101F2 18-64 years, mixed 693.8
Pons
Scaled Tags Per Million: 1183.3
FF:10033-101E6 18-54 years, mixed 1183.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 1298.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 824.8
Samples: 4

Max nTPM: 901.9
Min nTPM: 634.0
Sample A Female 899.7
Sample B Female 901.9
Sample C Male 863.4
Sample D Male 634.0
Pons
nTPM: 1298.4
Samples: 4

Max nTPM: 1543.3
Min nTPM: 879.7
Sample A Female 1543.3
Sample B Female 879.7
Sample C Male 1433.0
Sample D Male 1337.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1776.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1776.7
Samples: 4

Max nTPM: 1803.2
Min nTPM: 1758.7
Sample A Male 1768.9
Sample B Male 1758.7
Sample C Female 1776.1
Sample D Female 1803.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.0
182 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 13.0
183 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 12.9
Pons
Expression energy: 13.9
182 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 13.9
183 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 13.0

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