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RPS27A
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  • RPS27A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1291.3 nTPM
HPA:822.6 nTPM
GTEx:1291.3 nTPM
FANTOM5:27.1 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041344Antibody HPA049132Antibody CAB033319
Glandular cells MediumHighLow







SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

822.6
overview
Male, age 65
Small intestine sample 232
nTPM: 1022.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 785.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 742.1
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 739.6

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1291.3
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1291.3
Samples: 187

Max nTPM: 3257.3
Min nTPM: 700.0
Std nTPM: 432.1
Median nTPM: 1215.4
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3257.3
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2896.7
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2586.2
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2493.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2425.3
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2423.3
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2395.2
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2349.9
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2294.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2190.7
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2163.9
GTEX-183FY-1626-SM-793D8 20-29 years, male 2007.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2001.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1998.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1964.3
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1930.9
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1867.4
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1854.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1844.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1771.2
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1770.1
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1736.9
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1730.5
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1711.5
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1687.3
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1633.8
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1630.2
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1613.7
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1605.9
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1604.4
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1599.4
GTEX-1C475-1426-SM-793CH 40-49 years, female 1588.1
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1584.2
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1571.5
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1570.7
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1562.3
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1561.3
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1556.5
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1556.3
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1545.0
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1533.7
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1530.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1529.5
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1527.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1522.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1514.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1514.4
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1506.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1503.0
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1486.9
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1473.8
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1466.8
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1460.6
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1451.4
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1443.9
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1422.7
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1417.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1415.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1415.1
GTEX-1192X-2526-SM-59868 50-59 years, male 1407.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1401.9
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1400.6
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1400.0
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1392.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1392.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1381.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1371.0
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1361.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1342.8
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1335.7
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1328.4
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1327.1
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1321.9
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1314.5
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1313.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1313.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1301.5
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1281.5
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1273.0
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1272.4
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1272.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1269.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1264.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1263.9
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1259.5
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1259.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1257.5
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1246.7
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1235.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1233.6
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1232.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1228.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1222.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1215.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1187.0
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1177.1
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1174.0
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1169.4
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1166.3
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1165.2
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1155.1
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1150.8
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1150.1
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1147.2
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1145.8
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1142.5
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1137.3
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1132.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1125.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1124.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1111.7
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1111.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1107.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1106.5
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1105.5
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1101.8
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1100.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1097.7
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1092.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1089.9
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1088.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1085.6
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1079.4
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1069.3
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1057.2
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1056.4
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1055.3
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1052.7
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1047.3
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1042.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1033.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1027.7
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1022.4
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1019.9
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1012.6
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1008.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1006.8
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1002.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1001.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 999.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 998.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 995.4
GTEX-144GM-1026-SM-79OKU 20-29 years, male 990.4
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 982.7
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 979.7
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 977.8
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 963.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 959.9
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 942.5
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 939.3
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 936.6
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 934.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 932.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 923.3
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 903.4
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 899.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 897.6
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 886.0
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 884.9
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 871.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 868.7
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 868.3
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 862.1
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 860.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 860.7
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 856.8
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 851.1
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 849.3
GTEX-1122O-1326-SM-5H11F 60-69 years, female 842.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 832.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 830.9
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 821.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 813.9
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 796.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 791.0
GTEX-YFCO-1326-SM-664NV 40-49 years, male 779.6
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 774.4
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 766.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 748.3
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 744.5
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 744.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 734.7
GTEX-111YS-1426-SM-5GID8 60-69 years, male 727.7
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 726.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 711.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 705.5
GTEX-ZTSS-0926-SM-59865 40-49 years, male 700.0
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

27.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 27.1
FF:10024-101D6 15,40,85 years, mixed 27.1

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