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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:270.4 nTPM
HPA Brain:276.2 nTPM
GTEx:270.4 nTPM
FANTOM5:261.4 Scaled Tags Per Million
Pig:240.8 nTPM
Mouse:448.0 nTPM
Allen mouse:7.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA062620
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

276.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 103.0
1781 Male, age 74, unknown 148.0
2846 Female, age 79, unknown 126.7
2288 Male, age 75, left hemisphere 115.9
2290 Female, age 72, unknown 113.2
1857 Female, age 85, left hemisphere 106.3
1854 Male, age 80, left hemisphere 84.5
2289 Male, age 61, right hemisphere 80.3
2481 Female, age 94, left hemisphere 49.5
Globus pallidus, externus
nTPM: 36.9
2772 Female, age 79, unknown 69.1
2395 Male, age 75, both hemispheres 40.6
1996 Male, age 80, right hemisphere 26.1
2646 Male, age 61, right hemisphere 24.3
2567 Female, age 72, unknown 24.2
Globus pallidus, internus
nTPM: 35.2
1818 Male, age 74, unknown 67.3
2483 Female, age 94, right hemisphere 37.9
2566 Female, age 72, unknown 35.9
2037 Male, age 80, right hemisphere 34.3
2111 Female, age 85, right hemisphere 25.4
2287 Male, age 75, right hemisphere 24.7
2778 Female, age 91, both hemispheres 20.9
Nucleus accumbens
nTPM: 133.3
1856 Female, age 91, right hemisphere 320.9
1783 Male, age 74, unknown 155.3
2824 Male, age 61, right hemisphere 144.7
2698 Female, age 72, unknown 119.9
1806 Female, age 85, left hemisphere 109.1
2286 Male, age 75, left hemisphere 87.2
2732 Male, age 80, right hemisphere 83.9
2391 Female, age 94, left hemisphere 45.1
Nucleus basalis of Meynert
nTPM: 65.8
2821 Male, age 75, both hemispheres 84.4
2484 Female, age 94, left hemisphere 83.8
2393 Male, age 80, right hemisphere 74.5
2569 Male, age 61, both hemispheres 20.6
Nucleus of the diagonal band
nTPM: 276.2
1812 Female, age 91, both hemispheres 382.0
2775 Male, age 80, right hemisphere 308.9
2195 Female, age 85, both hemispheres 276.1
2029 Male, age 61, right hemisphere 275.2
1979 Male, age 74, unknown 138.6
Putamen
nTPM: 108.5
1937 Female, age 91, right hemisphere 182.4
2466 Female, age 79, unknown 148.5
1838 Male, age 80, right hemisphere 123.4
1829 Male, age 74, unknown 117.7
2489 Female, age 72, unknown 81.2
2647 Male, age 75, left hemisphere 55.2
2482 Female, age 94, left hemisphere 51.1
Septal nuclei
nTPM: 231.2
1960 Male, age 74, unknown 340.0
2009 Female, age 91, both hemispheres 330.3
2031 Female, age 72, unknown 312.9
2629 Female, age 94, right hemisphere 294.5
2059 Female, age 85, both hemispheres 161.4
2394 Male, age 61, left hemisphere 95.1
2199 Male, age 80, right hemisphere 84.0
Stria terminalis, bed nucleus
nTPM: 260.7
1974 Female, age 91, both hemispheres 372.5
2486 Female, age 94, both hemispheres 294.0
2201 Male, age 74, unknown 115.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

270.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 232.0
Samples: 246

Max nTPM: 664.3
Min nTPM: 23.4
Std nTPM: 129.7
Median nTPM: 219.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 664.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 663.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 656.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 577.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 567.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 538.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 520.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 514.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 504.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 499.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 489.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 475.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 469.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 466.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 446.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 446.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 433.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 419.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 414.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 408.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 407.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 407.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 402.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 400.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 398.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 393.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 390.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 386.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 386.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 385.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 375.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 374.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 368.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 364.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 363.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 356.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 353.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 352.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 352.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 350.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 346.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 343.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 343.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 343.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 339.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 338.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 337.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 334.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 333.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 332.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 330.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 328.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 327.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 326.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 324.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 322.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 320.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 319.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 317.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 314.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 314.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 313.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 313.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 310.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 309.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 309.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 309.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 309.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 306.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 304.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 300.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 297.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 295.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 294.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 292.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 288.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 288.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 288.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 284.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 284.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 282.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 281.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 278.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 278.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 277.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 276.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 274.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 274.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 271.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 270.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 268.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 267.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 264.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 263.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 262.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 262.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 260.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 258.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 257.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 257.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 257.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 253.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 252.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 251.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 247.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 247.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 243.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 243.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 239.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 239.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 239.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 236.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 233.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 233.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 232.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 231.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 231.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 230.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 230.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 226.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 221.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 221.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 219.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 219.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 219.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 218.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 218.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 216.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 216.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 215.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 214.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 213.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 213.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 209.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 209.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 208.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 207.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 205.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 204.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 201.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 200.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 197.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 195.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 195.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 194.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 194.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 193.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 192.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 191.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 191.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 190.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 190.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 189.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 184.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 181.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 178.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 173.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 171.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 170.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 170.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 169.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 167.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 165.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 164.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 160.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 159.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 159.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 152.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 152.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 152.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 150.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 146.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 145.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 143.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 141.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 140.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 139.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 138.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 136.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 136.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 136.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 136.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 134.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 132.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 132.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 129.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 126.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 126.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 119.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 117.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 117.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 114.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 110.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 106.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 106.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 105.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 104.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 100.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 100.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 100.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 100.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 98.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 98.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 98.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 98.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 96.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 96.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 96.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 91.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 89.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 88.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 85.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 81.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 81.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 80.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 76.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 75.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 75.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 74.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 73.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 72.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 70.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 66.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 62.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 61.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 61.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 60.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 59.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 59.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 51.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 49.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 46.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 40.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 40.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 39.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 38.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 37.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 35.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 31.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 31.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 29.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 27.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 23.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 270.4
Samples: 246

Max nTPM: 590.4
Min nTPM: 23.7
Std nTPM: 108.1
Median nTPM: 275.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 590.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 517.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 510.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 498.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 485.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 471.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 454.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 453.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 452.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 438.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 430.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 429.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 428.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 427.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 424.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 424.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 423.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 420.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 420.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 420.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 416.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 414.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 406.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 406.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 402.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 398.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 397.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 396.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 394.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 394.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 391.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 391.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 390.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 388.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 387.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 387.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 386.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 379.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 378.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 378.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 375.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 374.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 372.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 371.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 370.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 368.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 368.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 367.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 365.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 364.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 364.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 361.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 360.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 359.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 357.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 357.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 355.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 352.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 352.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 350.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 347.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 345.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 345.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 344.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 343.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 342.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 340.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 338.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 337.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 337.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 335.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 333.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 332.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 332.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 331.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 331.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 331.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 331.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 330.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 329.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 327.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 326.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 319.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 318.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 316.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 316.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 315.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 315.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 314.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 312.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 309.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 309.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 308.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 308.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 307.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 305.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 304.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 303.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 303.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 303.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 303.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 302.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 302.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 302.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 300.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 298.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 298.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 297.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 296.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 294.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 293.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 293.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 292.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 289.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 287.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 287.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 286.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 284.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 284.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 279.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 277.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 276.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 275.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 274.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 274.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 273.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 270.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 269.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 267.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 266.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 265.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 264.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 263.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 263.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 263.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 262.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 261.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 261.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 261.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 260.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 259.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 257.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 256.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 253.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 251.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 250.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 250.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 250.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 247.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 246.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 245.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 242.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 241.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 239.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 237.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 237.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 237.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 236.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 235.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 235.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 233.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 232.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 232.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 231.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 231.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 231.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 230.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 230.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 228.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 225.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 222.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 220.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 220.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 217.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 216.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 211.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 211.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 209.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 209.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 209.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 205.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 205.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 204.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 204.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 203.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 200.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 200.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 200.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 196.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 188.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 188.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 187.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 186.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 180.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 179.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 176.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 172.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 171.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 168.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 167.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 166.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 165.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 164.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 164.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 164.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 162.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 161.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 159.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 147.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 142.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 139.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 138.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 137.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 135.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 134.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 133.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 130.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 130.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 129.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 121.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 119.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 115.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 112.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 100.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 94.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 89.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 89.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 88.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 84.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 83.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 80.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 79.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 79.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 76.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 74.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 72.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 66.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 63.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 60.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 60.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 49.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 48.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 42.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 41.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 28.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 23.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 243.7
Samples: 205

Max nTPM: 653.7
Min nTPM: 10.3
Std nTPM: 133.6
Median nTPM: 252.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 653.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 634.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 626.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 593.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 544.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 500.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 475.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 473.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 465.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 459.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 452.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 449.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 444.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 442.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 433.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 428.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 423.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 423.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 420.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 419.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 418.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 406.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 405.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 400.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 400.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 397.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 396.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 390.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 389.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 383.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 382.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 380.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 379.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 378.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 377.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 374.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 368.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 362.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 361.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 360.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 356.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 356.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 355.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 353.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 353.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 347.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 342.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 330.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 328.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 327.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 326.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 322.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 322.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 318.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 317.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 313.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 312.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 312.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 310.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 309.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 309.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 304.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 304.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 304.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 303.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 303.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 301.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 301.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 301.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 295.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 295.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 293.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 293.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 292.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 288.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 287.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 287.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 287.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 282.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 282.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 280.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 280.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 274.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 274.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 273.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 272.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 270.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 270.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 270.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 268.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 267.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 264.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 264.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 262.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 262.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 261.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 259.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 259.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 258.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 257.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 255.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 252.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 252.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 251.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 251.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 251.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 248.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 245.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 243.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 239.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 239.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 239.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 237.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 235.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 232.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 231.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 230.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 229.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 227.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 225.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 222.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 217.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 213.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 209.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 208.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 206.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 204.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 203.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 200.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 195.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 190.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 189.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 186.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 185.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 183.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 182.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 182.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 178.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 175.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 174.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 173.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 169.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 167.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 167.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 164.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 158.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 156.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 147.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 144.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 142.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 142.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 140.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 139.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 137.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 123.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 122.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 118.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 117.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 116.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 113.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 108.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 107.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 107.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 107.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 107.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 106.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 106.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 103.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 99.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 94.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 92.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 92.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 88.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 85.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 85.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 82.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 80.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 80.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 75.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 71.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 69.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 64.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 62.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 61.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 61.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 57.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 56.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 56.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 55.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 54.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 53.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 47.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 46.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 45.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 43.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 38.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 35.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 35.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 34.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 30.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 28.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 20.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 18.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 14.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 10.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

261.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 158.7
FF:10164-103B2 76 years, female 158.7
Nucleus accumbens
Scaled Tags Per Million: 261.4
FF:10037-101F1 23-56 years, mixed 261.4
Putamen
Scaled Tags Per Million: 245.0
FF:10176-103C5 60 years, female 245.0
Globus pallidus
Scaled Tags Per Million: 65.2
FF:10175-103C4 60 years, female 113.0
FF:10161-103A8 76 years, female 17.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

240.8
Pig sample Sample description nTPM
Caudate
nTPM: 229.8
Samples: 4

Max nTPM: 263.0
Min nTPM: 191.1
Sample A Female 191.1
Sample B Female 255.9
Sample C Male 263.0
Sample D Male 209.0
Putamen
nTPM: 186.0
Samples: 4

Max nTPM: 232.8
Min nTPM: 119.5
Sample A Female 119.5
Sample B Female 194.2
Sample C Male 232.8
Sample D Male 197.6
Septum
nTPM: 240.8
Samples: 4

Max nTPM: 282.0
Min nTPM: 220.8
Sample A Female 282.0
Sample B Female 220.8
Sample C Male 233.5
Sample D Male 227.0
Ventral pallidum
nTPM: 191.9
Samples: 4

Max nTPM: 269.0
Min nTPM: 132.0
Sample A Female 269.0
Sample B Female 132.0
Sample C Male 187.2
Sample D Male 179.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

448.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 241.9
Samples: 4

Max nTPM: 276.4
Min nTPM: 194.1
Sample A Male 194.1
Sample B Male 223.7
Sample C Female 276.4
Sample D Female 273.2
Septum
nTPM: 448.0
Samples: 4

Max nTPM: 517.0
Min nTPM: 396.2
Sample A Male 396.2
Sample B Male 517.0
Sample C Female 460.5
Sample D Female 418.3
Ventral forebrain
nTPM: 319.9
Samples: 4

Max nTPM: 340.9
Min nTPM: 289.9
Sample A Male 289.9
Sample B Male 311.7
Sample C Female 340.9
Sample D Female 336.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.4
75988633 Antisense, RP_060620_02_E05, Mouse strain C57BL/6J (56 days, male) 8.0
71280733 Antisense, RP_050818_01_E04, Mouse strain C57BL/6J (56 days, male) 4.9
Pallidum
Expression energy: 7.9
75988633 Antisense, RP_060620_02_E05, Mouse strain C57BL/6J (56 days, male) 8.9
71280733 Antisense, RP_050818_01_E04, Mouse strain C57BL/6J (56 days, male) 7.0

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