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TAGLN3
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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: High
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:283.9 nTPM
HPA Brain:176.4 nTPM
GTEx:283.9 nTPM
FANTOM5:187.4 Scaled Tags Per Million
Pig:301.0 nTPM
Mouse:675.5 nTPM
Allen mouse:4.7 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA062620
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Low
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core High
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected


CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.4
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 176.4
2101 Male, age 74, right hemisphere 415.8
2006 Male, age 61, right hemisphere 207.0
1768 Female, age 72, unknown 194.9
2055 Female, age 91, right hemisphere 175.7
1774 Male, age 80, left hemisphere 155.5
1788 Male, age 55, unknown 98.6
1769 Male, age 76, right hemisphere 95.5
2003 Female, age 85, right hemisphere 67.9
Cerebellar nuclei
nTPM: 107.2
2318 Male, age 74, left hemisphere 168.8
2783 Female, age 72, unknown 160.6
2177 Female, age 85, both hemispheres 136.7
2882 Male, age 76, left hemisphere 105.8
1879 Male, age 55, unknown 92.2
1966 Female, age 91, left hemisphere 87.7
2175 Male, age 61, right hemisphere 78.2
2005 Male, age 80, left hemisphere 69.7
1871 Male, age 74, unknown 65.3
Flocculonodular lobe
nTPM: 143.2
2004 Male, age 61, right hemisphere 239.6
2176 Female, age 91, right hemisphere 170.3
1771 Male, age 80, left hemisphere 169.4
1835 Female, age 85, right hemisphere 121.4
1792 Male, age 74, unknown 119.1
1767 Male, age 76, left hemisphere 92.5
1765 Male, age 55, unknown 90.4
Vermis
nTPM: 147.3
1751 Male, age 74, right hemisphere 343.9
1928 Female, age 72, unknown 177.3
1778 Female, age 91, left hemisphere 162.7
2834 Male, age 80, left hemisphere 151.6
1988 Female, age 85, left hemisphere 118.9
1825 Male, age 74, unknown 101.4
1766 Male, age 55, unknown 96.1
1770 Male, age 76, left hemisphere 95.7
2460 Male, age 61, both hemispheres 78.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

283.9
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 283.9
Samples: 215

Max nTPM: 533.7
Min nTPM: 120.3
Std nTPM: 55.5
Median nTPM: 281.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 533.7
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 420.4
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 419.5
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 417.3
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 402.8
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 401.9
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 394.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 391.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 390.4
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 387.5
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 386.8
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 384.8
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 384.5
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 374.8
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 370.1
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 364.5
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 362.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 362.2
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 360.6
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 360.6
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 356.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 354.7
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 351.7
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 350.4
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 346.9
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 346.8
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 346.1
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 342.9
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 341.6
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 339.9
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 339.1
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 337.7
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 333.4
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 332.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 331.9
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 331.3
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 331.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 329.9
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 328.3
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 327.5
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 327.2
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 326.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 326.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 325.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 325.5
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 323.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 322.7
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 320.9
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 319.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 319.1
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 317.5
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 316.9
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 316.1
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 315.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 314.9
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 314.3
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 314.2
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 313.4
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 312.9
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 311.0
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 310.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 309.3
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 309.3
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 309.2
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 308.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 306.9
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 305.9
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 305.8
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 304.9
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 304.5
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 303.4
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 302.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 301.7
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 300.1
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 300.0
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 299.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 298.3
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 297.2
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 296.6
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 296.4
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 295.9
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 295.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 294.1
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 293.6
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 293.4
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 292.9
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 292.4
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 292.2
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 291.6
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 291.5
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 291.0
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 288.8
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 288.6
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 288.6
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 288.5
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 288.0
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 287.5
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 287.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 287.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 286.4
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 286.3
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 286.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 286.0
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 285.5
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 284.3
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 284.2
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 283.1
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 281.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 281.0
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 280.9
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 280.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 280.8
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 277.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 277.2
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 276.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 274.6
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 273.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 273.0
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 272.8
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 272.3
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 271.9
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 271.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 270.1
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 269.8
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 268.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 267.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 266.9
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 266.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 266.7
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 265.5
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 265.3
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 265.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 264.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 262.7
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 262.4
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 261.6
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 260.9
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 260.3
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 259.8
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 259.6
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 258.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 258.5
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 258.1
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 257.4
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 257.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 256.7
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 256.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 255.8
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 255.7
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 255.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 254.8
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 254.2
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 252.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 252.6
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 252.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 252.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 252.0
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 251.4
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 251.0
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 251.0
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 248.4
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 247.8
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 247.6
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 247.5
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 247.3
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 247.2
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 247.0
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 246.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 246.1
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 246.0
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 245.2
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 242.0
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 240.8
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 240.6
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 239.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 238.4
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 238.0
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 236.9
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 236.9
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 236.6
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 236.5
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 234.6
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 234.2
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 233.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 232.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 231.3
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 231.3
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 230.3
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 228.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 228.7
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 223.2
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 222.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 221.2
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 219.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 219.2
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 218.7
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 218.0
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 216.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 209.8
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 207.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 204.0
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 203.2
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 202.7
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 202.2
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 201.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 200.2
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 198.0
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 197.8
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 189.2
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 188.9
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 187.0
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 162.6
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 146.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 128.2
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 120.3
Show allShow less
Brain - Cerebellum
Average nTPM: 232.8
Samples: 241

Max nTPM: 433.3
Min nTPM: 119.9
Std nTPM: 35.9
Median nTPM: 232.1
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 433.3
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 356.3
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 337.6
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 307.7
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 305.9
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 304.8
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 296.4
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 296.2
GTEX-11EI6-2926-SM-5985U 60-69 years, male 295.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 295.9
GTEX-14E6D-2926-SM-664OP 50-59 years, male 295.3
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 290.5
GTEX-X261-3126-SM-4PQZC 50-59 years, male 285.8
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 283.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 283.2
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 282.9
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 280.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 279.0
GTEX-13112-2926-SM-5DUWT 50-59 years, male 277.9
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 276.3
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 276.2
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 274.1
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 273.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 272.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 272.5
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 272.2
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 272.2
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 272.0
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 270.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 269.9
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 267.6
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 267.4
GTEX-15G19-2826-SM-6M48K 60-69 years, male 266.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 266.2
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 265.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 264.6
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 264.0
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 263.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 261.8
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 261.5
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 261.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 260.9
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 260.4
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 260.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 260.1
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 260.0
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 259.1
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 258.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 258.4
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 258.0
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 257.9
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 257.5
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 257.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 256.8
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 255.2
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 254.9
GTEX-1192X-3226-SM-5987D 50-59 years, male 254.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 253.2
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 253.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 253.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 252.5
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 252.5
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 252.3
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 251.9
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 251.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 251.1
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 251.0
GTEX-12126-0926-SM-5FQTW 20-29 years, male 250.6
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 250.5
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 249.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 249.6
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 249.2
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 249.1
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 248.9
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 248.0
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 247.9
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 247.2
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 247.2
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 246.5
GTEX-11NUK-3026-SM-5986K 50-59 years, male 245.8
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 245.3
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 243.9
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 243.5
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 243.4
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 243.0
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 242.7
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 242.6
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 242.6
GTEX-11ONC-3026-SM-5985W 60-69 years, male 241.9
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 241.5
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 241.2
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 241.0
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 240.6
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 240.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 240.1
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 239.9
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 239.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 239.8
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 239.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 239.3
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 238.7
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 238.4
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 238.3
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 238.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 237.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 237.3
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 236.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 236.3
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 236.2
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 236.1
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 234.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 234.8
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 234.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 234.1
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 233.5
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 233.1
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 233.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 232.6
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 232.3
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 232.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 232.1
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 231.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 231.5
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 231.4
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 231.2
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 231.1
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 230.8
GTEX-145LS-3026-SM-5O99S 60-69 years, female 230.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 230.5
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 230.3
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 229.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 229.6
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 229.5
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 229.4
GTEX-17EVP-2926-SM-793BU 40-49 years, male 229.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 229.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 229.1
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 229.1
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 229.0
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 228.4
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 228.0
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 227.6
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 227.5
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 227.2
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 226.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 226.2
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 225.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 225.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 224.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 223.9
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 222.8
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 222.4
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 222.2
GTEX-144GL-2926-SM-5O99F 50-59 years, male 222.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 221.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 221.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 221.2
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 220.8
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 220.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 220.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 220.4
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 220.3
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 219.6
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 219.4
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 219.1
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 218.9
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 218.8
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 218.6
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 218.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 217.3
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 217.1
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 217.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 216.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 215.5
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 215.0
GTEX-14ABY-3026-SM-664NE 50-59 years, male 214.4
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 214.0
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 213.8
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 212.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 212.1
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 211.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 210.7
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 210.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 210.1
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 209.9
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 209.9
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 209.9
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 209.6
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 209.3
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 209.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 207.7
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 207.2
GTEX-RU72-2926-SM-2TF66 50-59 years, female 206.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 206.0
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 205.6
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 202.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 202.4
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 202.1
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 202.0
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 201.5
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 201.3
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 201.2
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 199.9
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 199.8
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 199.4
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 198.4
GTEX-11DYG-2926-SM-5H132 60-69 years, male 196.5
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 196.5
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 196.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 196.0
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 194.6
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 194.3
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 193.7
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 192.3
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 191.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 190.6
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 190.6
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 190.2
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 186.9
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 183.8
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 182.6
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 180.3
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 179.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 178.5
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 178.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 177.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 175.6
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 175.2
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 173.5
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 171.3
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 170.0
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 166.8
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 166.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 164.5
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 164.4
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 164.2
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 162.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 161.3
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 158.9
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 158.4
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 119.9
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

187.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 187.4
FF:10083-102B2 22-68 years, mixed 238.8
FF:10166-103B4 76 years, female 136.1

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

301.0
Pig sample Sample description nTPM
Cerebellum
nTPM: 301.1
Samples: 4

Max nTPM: 446.9
Min nTPM: 222.8
Sample A Female 446.9
Sample B Female 262.3
Sample C Male 222.8
Sample D Male 272.2

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

675.5
Mouse sample Sample description nTPM
Cerebellum
nTPM: 675.5
Samples: 4

Max nTPM: 686.9
Min nTPM: 655.2
Sample A Male 677.9
Sample B Male 655.2
Sample C Female 686.9
Sample D Female 682.1

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.7
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 4.7
71280733 Antisense, RP_050818_01_E04, Mouse strain C57BL/6J (56 days, male) 4.9
75988633 Antisense, RP_060620_02_E05, Mouse strain C57BL/6J (56 days, male) 4.5

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