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ALDH1L1
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  • ALDH1L1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:65.7 nTPM
HPA Brain:86.9 nTPM
GTEx:65.7 nTPM
FANTOM5:70.4 Scaled Tags Per Million
Pig:15.6 nTPM
Mouse:53.4 nTPM
Allen mouse:2.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036900Antibody HPA050139
Glial cells HighMedium
Neuronal cells MediumNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 75.1
2481 Female, age 94, left hemisphere 105.6
2289 Male, age 61, right hemisphere 88.2
1854 Male, age 80, left hemisphere 81.5
1857 Female, age 85, left hemisphere 77.7
1781 Male, age 74, unknown 74.9
2290 Female, age 72, unknown 65.3
2288 Male, age 75, left hemisphere 57.4
2846 Female, age 79, unknown 50.0
Globus pallidus, externus
nTPM: 86.9
2646 Male, age 61, right hemisphere 139.2
1996 Male, age 80, right hemisphere 111.9
2772 Female, age 79, unknown 68.7
2567 Female, age 72, unknown 63.6
2395 Male, age 75, both hemispheres 50.9
Globus pallidus, internus
nTPM: 67.7
2037 Male, age 80, right hemisphere 94.1
2483 Female, age 94, right hemisphere 91.4
1818 Male, age 74, unknown 72.4
2287 Male, age 75, right hemisphere 64.8
2566 Female, age 72, unknown 54.4
2778 Female, age 91, both hemispheres 53.6
2111 Female, age 85, right hemisphere 43.0
Nucleus accumbens
nTPM: 57.2
2286 Male, age 75, left hemisphere 67.7
1806 Female, age 85, left hemisphere 63.8
2824 Male, age 61, right hemisphere 59.0
2732 Male, age 80, right hemisphere 58.0
2391 Female, age 94, left hemisphere 55.2
1783 Male, age 74, unknown 53.9
1856 Female, age 91, right hemisphere 51.2
2698 Female, age 72, unknown 48.6
Nucleus basalis of Meynert
nTPM: 73.5
2569 Male, age 61, both hemispheres 148.0
2393 Male, age 80, right hemisphere 56.2
2484 Female, age 94, left hemisphere 53.4
2821 Male, age 75, both hemispheres 36.3
Nucleus of the diagonal band
nTPM: 51.6
2029 Male, age 61, right hemisphere 56.8
2195 Female, age 85, both hemispheres 54.0
2775 Male, age 80, right hemisphere 50.8
1979 Male, age 74, unknown 48.2
1812 Female, age 91, both hemispheres 48.0
Putamen
nTPM: 57.6
2482 Female, age 94, left hemisphere 72.0
1838 Male, age 80, right hemisphere 62.9
2647 Male, age 75, left hemisphere 61.8
2489 Female, age 72, unknown 57.3
1937 Female, age 91, right hemisphere 53.0
1829 Male, age 74, unknown 49.3
2466 Female, age 79, unknown 46.9
Septal nuclei
nTPM: 52.2
2059 Female, age 85, both hemispheres 80.7
2199 Male, age 80, right hemisphere 64.5
1960 Male, age 74, unknown 48.3
2394 Male, age 61, left hemisphere 47.3
2009 Female, age 91, both hemispheres 46.1
2031 Female, age 72, unknown 39.3
2629 Female, age 94, right hemisphere 38.8
Stria terminalis, bed nucleus
nTPM: 41.6
2201 Male, age 74, unknown 47.1
1974 Female, age 91, both hemispheres 40.0
2486 Female, age 94, both hemispheres 37.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 63.1
Samples: 246

Max nTPM: 194.3
Min nTPM: 9.7
Std nTPM: 31.6
Median nTPM: 55.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 194.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 192.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 162.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 160.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 159.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 157.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 153.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 140.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 133.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 128.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 127.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 127.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 124.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 122.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 120.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 119.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 111.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 109.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 108.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 108.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 107.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 106.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 105.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 102.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 102.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 102.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 102.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 101.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 100.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 98.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 96.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 95.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 95.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 95.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 94.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 91.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 89.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 89.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 88.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 87.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 87.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 86.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 86.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 86.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 85.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 85.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 85.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 84.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 84.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 84.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 84.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 84.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 84.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 84.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 83.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 82.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 81.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 80.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 80.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 80.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 78.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 78.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 78.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 78.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 78.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 75.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 74.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 74.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 74.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 74.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 73.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 73.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 73.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 73.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 72.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 72.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 72.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 72.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 72.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 72.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 72.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 70.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 70.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 70.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 68.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 68.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 67.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 66.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 66.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 66.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 66.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 66.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 66.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 66.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 66.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 65.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 65.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 65.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 64.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 64.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 63.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 63.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 63.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 63.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 63.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 62.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 62.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 60.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 60.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 60.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 60.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 59.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 58.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 58.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 58.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 58.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 57.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 56.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 56.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 56.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 55.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 55.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 55.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 54.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 54.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 54.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 54.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 54.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 54.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 54.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 53.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 52.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 52.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 52.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 52.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 52.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 51.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 51.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 51.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 50.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 50.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 50.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 49.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 48.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 48.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 48.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 48.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 47.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 47.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 47.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 47.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 46.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 46.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 46.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 46.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 46.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 46.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 45.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 45.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 45.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 45.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 45.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 44.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 44.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 44.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 44.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 43.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 43.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 43.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 42.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 42.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 42.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 42.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 41.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 41.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 41.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 41.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 41.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 40.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 40.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 39.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 39.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 39.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 39.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 38.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 38.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 38.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 38.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 38.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 37.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 36.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 36.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 36.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 36.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 36.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 35.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 35.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 34.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 34.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 34.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 34.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 33.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 33.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 32.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 32.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 31.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 31.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 30.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 30.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 30.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 30.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 29.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 29.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 29.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 28.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 27.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 27.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 26.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 26.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 25.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 23.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 21.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 20.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 18.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 16.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 15.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 14.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 13.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 13.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 12.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 10.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 9.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 9.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 50.6
Samples: 246

Max nTPM: 200.6
Min nTPM: 11.2
Std nTPM: 29.2
Median nTPM: 42.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 200.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 188.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 161.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 149.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 140.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 135.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 134.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 124.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 117.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 115.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 114.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 112.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 109.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 107.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 101.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 101.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 101.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 100.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 99.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 96.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 94.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 91.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 87.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 84.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 84.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 83.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 83.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 81.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 80.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 78.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 76.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 75.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 75.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 75.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 74.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 74.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 74.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 73.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 73.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 73.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 73.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 72.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 72.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 71.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 71.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 70.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 70.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 70.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 69.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 69.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 69.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 68.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 67.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 67.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 65.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 63.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 62.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 61.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 61.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 61.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 61.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 61.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 60.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 60.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 59.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 59.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 59.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 58.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 57.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 56.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 56.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 55.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 55.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 55.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 55.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 54.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 54.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 54.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 53.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 53.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 53.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 53.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 53.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 53.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 52.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 52.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 51.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 51.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 51.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 50.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 50.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 50.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 49.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 49.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 49.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 49.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 48.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 48.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 48.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 47.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 47.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 47.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 47.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 46.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 46.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 46.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 45.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 45.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 45.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 45.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 45.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 45.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 45.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 43.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 43.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 43.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 43.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 43.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 42.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 42.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 42.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 42.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 42.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 41.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 41.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 41.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 41.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 41.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 41.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 40.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 40.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 40.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 40.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 39.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 39.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 39.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 39.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 39.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 39.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 39.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 39.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 38.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 38.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 38.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 38.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 38.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 38.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 37.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 37.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 37.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 37.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 37.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 36.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 36.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 36.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 36.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 36.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 36.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 35.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 35.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 35.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 35.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 35.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 35.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 34.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 34.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 34.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 34.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 34.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 34.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 34.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 34.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 33.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 33.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 32.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 32.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 32.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 32.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 32.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 31.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 31.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 31.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 31.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 31.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 31.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 31.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 30.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 30.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 30.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 30.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 30.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 30.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 30.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 30.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 30.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 29.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 29.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 29.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 29.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 29.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 29.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 29.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 29.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 29.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 28.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 28.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 28.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 27.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 27.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 27.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 27.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 26.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 26.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 26.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 25.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 25.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 24.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 24.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 24.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 24.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 24.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 24.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 24.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 23.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 23.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 23.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 22.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 22.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 21.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 21.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 20.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 19.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 19.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 17.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 17.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 17.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 16.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 16.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 16.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 16.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 16.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 14.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 14.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 14.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 11.2
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Brain - Putamen (basal ganglia)
Average nTPM: 65.7
Samples: 205

Max nTPM: 299.1
Min nTPM: 8.6
Std nTPM: 40.4
Median nTPM: 57.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 299.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 295.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 190.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 188.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 161.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 152.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 151.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 144.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 143.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 140.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 139.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 136.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 127.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 124.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 123.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 121.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 120.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 117.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 117.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 114.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 112.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 108.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 107.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 105.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 104.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 102.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 102.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 100.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 99.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 98.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 98.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 98.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 95.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 94.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 94.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 93.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 90.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 89.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 89.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 86.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 86.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 85.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 85.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 85.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 84.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 84.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 84.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 83.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 83.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 83.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 83.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 81.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 80.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 79.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 79.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 78.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 78.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 77.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 76.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 74.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 74.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 73.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 73.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 72.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 71.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 71.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 71.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 70.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 70.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 70.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 70.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 69.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 69.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 68.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 67.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 67.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 67.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 67.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 67.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 67.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 66.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 66.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 65.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 64.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 64.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 64.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 64.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 63.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 63.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 63.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 63.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 62.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 62.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 62.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 62.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 61.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 61.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 61.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 59.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 58.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 57.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 57.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 57.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 56.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 56.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 55.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 55.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 55.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 54.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 54.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 54.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 54.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 54.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 53.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 52.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 52.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 52.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 52.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 52.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 52.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 52.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 51.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 50.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 50.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 50.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 49.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 48.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 47.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 47.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 47.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 47.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 47.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 47.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 47.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 46.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 46.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 46.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 46.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 45.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 45.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 45.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 44.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 44.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 44.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 44.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 43.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 42.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 42.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 42.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 42.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 41.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 40.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 40.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 39.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 39.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 37.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 37.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 36.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 35.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 35.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 35.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 34.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 34.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 34.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 34.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 33.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 32.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 32.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 32.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 32.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 32.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 31.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 31.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 30.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 30.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 30.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 30.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 29.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 29.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 28.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 26.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 26.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 26.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 26.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 26.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 26.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 25.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 23.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 23.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 23.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 22.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 22.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 22.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 22.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 21.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 18.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 16.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 14.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 13.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 13.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 11.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 10.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 8.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

70.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 49.3
FF:10164-103B2 76 years, female 49.3
Nucleus accumbens
Scaled Tags Per Million: 29.4
FF:10037-101F1 23-56 years, mixed 29.4
Putamen
Scaled Tags Per Million: 70.4
FF:10176-103C5 60 years, female 70.4
Globus pallidus
Scaled Tags Per Million: 43.3
FF:10175-103C4 60 years, female 61.9
FF:10161-103A8 76 years, female 24.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.6
Pig sample Sample description nTPM
Caudate
nTPM: 15.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 11.1
Sample A Female 12.6
Sample B Female 19.3
Sample C Male 18.2
Sample D Male 11.1
Putamen
nTPM: 14.5
Samples: 4

Max nTPM: 17.2
Min nTPM: 12.3
Sample A Female 15.0
Sample B Female 13.6
Sample C Male 17.2
Sample D Male 12.3
Septum
nTPM: 15.7
Samples: 4

Max nTPM: 17.7
Min nTPM: 13.6
Sample A Female 13.6
Sample B Female 17.7
Sample C Male 14.2
Sample D Male 17.1
Ventral pallidum
nTPM: 14.9
Samples: 4

Max nTPM: 19.2
Min nTPM: 11.7
Sample A Female 11.7
Sample B Female 16.9
Sample C Male 19.2
Sample D Male 11.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 53.4
Samples: 4

Max nTPM: 60.5
Min nTPM: 47.5
Sample A Male 50.0
Sample B Male 47.5
Sample C Female 55.4
Sample D Female 60.5
Septum
nTPM: 50.8
Samples: 4

Max nTPM: 57.9
Min nTPM: 42.8
Sample A Male 42.8
Sample B Male 53.3
Sample C Female 57.9
Sample D Female 49.0
Ventral forebrain
nTPM: 49.2
Samples: 4

Max nTPM: 56.7
Min nTPM: 44.6
Sample A Male 46.9
Sample B Male 44.6
Sample C Female 56.7
Sample D Female 48.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.9
1725 Antisense, RP_040604_01_B01, Mouse strain C57BL/6J (56 days, male) 1.9
1724 Antisense, RP_040604_01_B01, Mouse strain C57BL/6J (56 days, male) 1.0
Pallidum
Expression energy: 2.6
1725 Antisense, RP_040604_01_B01, Mouse strain C57BL/6J (56 days, male) 2.6
1724 Antisense, RP_040604_01_B01, Mouse strain C57BL/6J (56 days, male) 1.0

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